RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ABCC8Q09428 1581 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 DYTNA2CJ06 578 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 GSG1L2A8MUP6 293 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 ST18O60284 1047 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 MICAL2O94851 1124 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 PF4P02776 101 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 GARTP22102 1010 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 POLD1P28340 1107 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 HALP42357 657 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 SCTRP47872 440 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 CEBPAP49715 358 aaPredicted RBP3.51□□□□□ -1.85
HMGN4-202ENST00000477243 BCAMP50895 628 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 GEMIN4P57678 1058 aaKnown RBP3.51□□□□□ -1.85
HMGN4-202ENST00000477243 FAM160A1Q05DH4 1040 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 BIRC3Q13489 604 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 MTMR1Q13613 665 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 MAP7Q14244 749 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 SAFBQ15424 915 aaKnown RBP eCLIP3.51□□□□□ -1.85
HMGN4-202ENST00000477243 GPR162Q16538 588 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 SLC4A8Q2Y0W8 1093 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 SEZ6Q53EL9 994 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 CCDC93Q567U6 631 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 TBCELQ5QJ74 424 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 HGSNATQ68CP4 663 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 IL31Q6EBC2 164 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 TOGARAM2Q6ZUX3 1019 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 CYP2U1Q7Z449 544 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 ANKRD23Q86SG2 305 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 C19orf47Q8N9M1 422 aaKnown RBP3.51□□□□□ -1.85
HMGN4-202ENST00000477243 PHC3Q8NDX5 983 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 WHAMMQ8TF30 809 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 JPH3Q8WXH2 748 aaPredicted RBP3.51□□□□□ -1.85
HMGN4-202ENST00000477243 ERP27Q96DN0 273 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 MTMR8Q96EF0 704 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 CDK5RAP3Q96JB5 506 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 TNIP3Q96KP6 325 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 SPATA9Q9BWV2 254 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 LRRC3Q9BY71 257 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 OSBPL3Q9H4L5 887 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 ETNK1Q9HBU6 452 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 PLCB1Q9NQ66 1216 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 MAN1C1Q9NR34 630 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.51□□□□□ -1.85
HMGN4-202ENST00000477243 PGAP2Q9UHJ9 254 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 ZNF232Q9UNY5 417 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 MAP4K5Q9Y4K4 846 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 NUB1Q9Y5A7 615 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 PARP3Q9Y6F1 533 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 PTPRUQ92729 1446 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 TTC37Q6PGP7 1564 aa3.51□□□□□ -1.85
HMGN4-202ENST00000477243 TCOF1Q13428 1488 aaKnown RBP3.5□□□□□ -1.85
HMGN4-202ENST00000477243 KLRG2A4D1S0 409 aaPredicted RBP3.5□□□□□ -1.85
HMGN4-202ENST00000477243 VSTM5A8MXK1 200 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 ERVH48-1M5A8F1 160 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 EML1O00423 815 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 ERC2O15083 957 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 ABLIM3O94929 683 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 FAM153BP0C7A2 387 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 EPB42P16452 691 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 TYRP1P17643 537 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 LMNB1P20700 586 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 LIG3P49916 1009 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 NEK3P51956 506 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 EIF5P55010 431 aaKnown RBP3.5□□□□□ -1.85
HMGN4-202ENST00000477243 RAB15P59190 212 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 ZNF280AP59817 542 aaPredicted RBP3.5□□□□□ -1.85
HMGN4-202ENST00000477243 RPS26P62854 115 aaKnown RBP3.5□□□□□ -1.85
HMGN4-202ENST00000477243 DHX9Q08211 1270 aaKnown RBP3.5□□□□□ -1.85
HMGN4-202ENST00000477243 CHAF1AQ13111 956 aaPredicted RBP3.5□□□□□ -1.85
HMGN4-202ENST00000477243 DDX10Q13206 875 aaKnown RBP3.5□□□□□ -1.85
HMGN4-202ENST00000477243 GTF2H3Q13889 308 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 GRM2Q14416 872 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 SETDB1Q15047 1291 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 DHCR24Q15392 516 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 RGL3Q3MIN7 710 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 TBC1D10BQ4KMP7 808 aaPredicted RBP3.5□□□□□ -1.85
HMGN4-202ENST00000477243 COBLL1Q53SF7 1204 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 DACT2Q5SW24 774 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 KIAA0319Q5VV43 1072 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 PPP4R3AQ6IN85 833 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 CC2D1AQ6P1N0 951 aaPredicted RBP3.5□□□□□ -1.85
HMGN4-202ENST00000477243 LRRTM3Q86VH5 581 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 NLRP8Q86W28 1048 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 FCHSD1Q86WN1 690 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 SPATS2Q86XZ4 545 aaKnown RBP3.5□□□□□ -1.85
HMGN4-202ENST00000477243 CREBRFQ8IUR6 639 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 FAM178BQ8IXR5 827 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 CCDC24Q8N4L8 307 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 C3orf58Q8NDZ4 430 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 ACRBPQ8NEB7 543 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 DDX1Q92499 740 aaKnown RBP3.5□□□□□ -1.85
HMGN4-202ENST00000477243 BAP1Q92560 729 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 TRMT2BQ96GJ1 504 aaKnown RBP3.5□□□□□ -1.85
HMGN4-202ENST00000477243 TBATAQ96M53 351 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 SPSB2Q99619 263 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 SMAD5Q99717 465 aaKnown RBP3.5□□□□□ -1.85
HMGN4-202ENST00000477243 YIPF4Q9BSR8 244 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 C1QTNF1Q9BXJ1 281 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 C1QTNF2Q9BXJ5 285 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 RTFDC1Q9BY42 306 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms