RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 AFG3L2Q9Y4W6 797 aa14.04□□□□□ -0.16
LSM2-212ENST00000477182 PTPRAP18433 802 aa14.03□□□□□ -0.16
LSM2-212ENST00000477182 RGS3P49796 1198 aa14.03□□□□□ -0.16
LSM2-212ENST00000477182 TCP10Q12799 353 aa14.03□□□□□ -0.16
LSM2-212ENST00000477182 TJAP1Q5JTD0 557 aa14.03□□□□□ -0.16
LSM2-212ENST00000477182 IQSEC3Q9UPP2 1182 aaPredicted RBP14.03□□□□□ -0.16
LSM2-212ENST00000477182 AGTPBP1Q9UPW5 1226 aa14.03□□□□□ -0.16
LSM2-212ENST00000477182 SALL3Q9BXA9 1300 aa14.02□□□□□ -0.17
LSM2-212ENST00000477182 MX1P20591 662 aa14.02□□□□□ -0.17
LSM2-212ENST00000477182 GCLCP48506 637 aaPredicted RBP14.02□□□□□ -0.17
LSM2-212ENST00000477182 LRRC26Q2I0M4 334 aa14.02□□□□□ -0.17
LSM2-212ENST00000477182 GORABQ5T7V8 394 aa14.02□□□□□ -0.17
LSM2-212ENST00000477182 TSHZ3Q63HK5 1081 aa14.02□□□□□ -0.17
LSM2-212ENST00000477182 PLEKHM2Q8IWE5 1019 aa14.02□□□□□ -0.17
LSM2-212ENST00000477182 GJD2Q9UKL4 321 aa14.02□□□□□ -0.17
LSM2-212ENST00000477182 FOSL2P15408 326 aa14.01□□□□□ -0.17
LSM2-212ENST00000477182 PDE1AP54750 535 aa14.01□□□□□ -0.17
LSM2-212ENST00000477182 TRIM32Q13049 653 aa14.01□□□□□ -0.17
LSM2-212ENST00000477182 MAP3K21Q5TCX8 1036 aa14.01□□□□□ -0.17
LSM2-212ENST00000477182 TRMT44Q8IYL2 757 aaKnown RBP14.01□□□□□ -0.17
LSM2-212ENST00000477182 MYLIPQ8WY64 445 aa14.01□□□□□ -0.17
LSM2-212ENST00000477182 GPATCH3Q96I76 525 aa14.01□□□□□ -0.17
LSM2-212ENST00000477182 PRKAG2Q9UGJ0 569 aa14.01□□□□□ -0.17
LSM2-212ENST00000477182 MYO5AQ9Y4I1 1855 aaKnown RBP14.01□□□□□ -0.17
LSM2-212ENST00000477182 PHF20L1A8MW92 1017 aa14□□□□□ -0.17
LSM2-212ENST00000477182 PRKAR2AP13861 404 aaKnown RBP14□□□□□ -0.17
LSM2-212ENST00000477182 PHKA1P46020 1223 aa14□□□□□ -0.17
LSM2-212ENST00000477182 TTC39AQ5SRH9 613 aa14□□□□□ -0.17
LSM2-212ENST00000477182 ECHDC1Q9NTX5 307 aa14□□□□□ -0.17
LSM2-212ENST00000477182 DOCK2Q92608 1830 aa13.99□□□□□ -0.17
LSM2-212ENST00000477182 TTC41PQ6P2S7 1318 aa13.99□□□□□ -0.17
LSM2-212ENST00000477182 TRIM75PA6NK02 468 aa13.99□□□□□ -0.17
LSM2-212ENST00000477182 CTNND1O60716 968 aaKnown RBP13.99□□□□□ -0.17
LSM2-212ENST00000477182 XRCC5P13010 732 aaKnown RBP13.99□□□□□ -0.17
LSM2-212ENST00000477182 SMAD3P84022 425 aaKnown RBP13.99□□□□□ -0.17
LSM2-212ENST00000477182 PABPC4Q13310 644 aaKnown RBP eCLIP13.99□□□□□ -0.172e-7■■■■□ 25.3
LSM2-212ENST00000477182 CCDC158Q5M9N0 1113 aa13.99□□□□□ -0.17
LSM2-212ENST00000477182 CCDC102BQ68D86 513 aa13.99□□□□□ -0.17
LSM2-212ENST00000477182 CDC42EP5Q6NZY7 148 aa13.99□□□□□ -0.17
LSM2-212ENST00000477182 PROCA1Q8NCQ7 364 aaPredicted RBP13.99□□□□□ -0.17
LSM2-212ENST00000477182 TRIB2Q92519 343 aa13.99□□□□□ -0.17
LSM2-212ENST00000477182 PHIPQ8WWQ0 1821 aa13.99□□□□□ -0.17
LSM2-212ENST00000477182 DNAH12Q6ZR08 3092 aa13.99□□□□□ -0.17
LSM2-212ENST00000477182 DOCK1Q14185 1865 aa13.98□□□□□ -0.17
LSM2-212ENST00000477182 NFIAQ12857 509 aa13.98□□□□□ -0.17
LSM2-212ENST00000477182 PI4K2BQ8TCG2 481 aa13.98□□□□□ -0.17
LSM2-212ENST00000477182 FAM198AQ9UFP1 575 aa13.98□□□□□ -0.17
LSM2-212ENST00000477182 RAPGEFL1Q9UHV5 662 aa13.98□□□□□ -0.17
LSM2-212ENST00000477182 MYH7P12883 1935 aa13.98□□□□□ -0.17
LSM2-212ENST00000477182 CDH23Q9H251 3354 aa13.97□□□□□ -0.17
LSM2-212ENST00000477182 PLXNB2O15031 1838 aa13.97□□□□□ -0.17
LSM2-212ENST00000477182 MAST2Q6P0Q8 1798 aa13.97□□□□□ -0.17
LSM2-212ENST00000477182 TMEM265A0A087WTH1 108 aa13.97□□□□□ -0.17
LSM2-212ENST00000477182 UQCRFS1P1P0C7P4 283 aa13.97□□□□□ -0.17
LSM2-212ENST00000477182 ATP5JP18859 108 aa13.97□□□□□ -0.17
LSM2-212ENST00000477182 WDR66Q8TBY9 1149 aa13.97□□□□□ -0.17
LSM2-212ENST00000477182 SOCS4Q8WXH5 440 aa13.97□□□□□ -0.17
LSM2-212ENST00000477182 NUDT12Q9BQG2 462 aa13.97□□□□□ -0.17
LSM2-212ENST00000477182 BOLA2Q9H3K6 86 aa13.97□□□□□ -0.17
LSM2-212ENST00000477182 OSBPL3Q9H4L5 887 aa13.97□□□□□ -0.17
LSM2-212ENST00000477182 DAGLAQ9Y4D2 1042 aa13.97□□□□□ -0.17
LSM2-212ENST00000477182 ATRNL1Q5VV63 1379 aa13.96□□□□□ -0.17
LSM2-212ENST00000477182 ERC2O15083 957 aa13.96□□□□□ -0.17
LSM2-212ENST00000477182 GLRX3O76003 335 aaKnown RBP13.96□□□□□ -0.17
LSM2-212ENST00000477182 CYP2B6P20813 491 aa13.96□□□□□ -0.17
LSM2-212ENST00000477182 ARID4AP29374 1257 aaPredicted RBP13.96□□□□□ -0.17
LSM2-212ENST00000477182 HOXD11P31277 338 aaPredicted RBP13.96□□□□□ -0.17
LSM2-212ENST00000477182 MAP3K10Q02779 954 aa13.96□□□□□ -0.17
LSM2-212ENST00000477182 TREML2Q5T2D2 321 aa13.96□□□□□ -0.17
LSM2-212ENST00000477182 LHX8Q68G74 356 aa13.96□□□□□ -0.17
LSM2-212ENST00000477182 TTYH1Q9H313 450 aaPredicted RBP13.96□□□□□ -0.17
LSM2-212ENST00000477182 SNRKQ9NRH2 765 aa13.96□□□□□ -0.17
LSM2-212ENST00000477182 USP40Q9NVE5 1235 aa13.96□□□□□ -0.17
LSM2-212ENST00000477182 GNL3LQ9NVN8 582 aaKnown RBP13.96□□□□□ -0.17
LSM2-212ENST00000477182 ENTPD3O75355 529 aa13.95□□□□□ -0.18
LSM2-212ENST00000477182 ZKSCAN1P17029 563 aaPredicted RBP13.95□□□□□ -0.18
LSM2-212ENST00000477182 MCAMP43121 646 aa13.95□□□□□ -0.18
LSM2-212ENST00000477182 CACNB2Q08289 660 aaPredicted RBP13.95□□□□□ -0.18
LSM2-212ENST00000477182 RASGRF1Q13972 1273 aa13.95□□□□□ -0.18
LSM2-212ENST00000477182 SHHQ15465 462 aa13.95□□□□□ -0.18
LSM2-212ENST00000477182 TTC22Q5TAA0 569 aa13.95□□□□□ -0.18
LSM2-212ENST00000477182 PI16Q6UXB8 463 aa13.95□□□□□ -0.18
LSM2-212ENST00000477182 ZNF512BQ96KM6 892 aaPredicted RBP13.95□□□□□ -0.18
LSM2-212ENST00000477182 TBC1D2Q9BYX2 928 aa13.95□□□□□ -0.18
LSM2-212ENST00000477182 SENP6Q9GZR1 1112 aaPredicted RBP13.95□□□□□ -0.18
LSM2-212ENST00000477182 MORF4L1Q9UBU8 362 aa13.95□□□□□ -0.18
LSM2-212ENST00000477182 NDUFB9Q9Y6M9 179 aa13.95□□□□□ -0.18
LSM2-212ENST00000477182 LTBP2Q14767 1821 aa13.94□□□□□ -0.18
LSM2-212ENST00000477182 LOC285556D6RIA3 1793 aa13.94□□□□□ -0.18
LSM2-212ENST00000477182 MAP4K4O95819 1239 aaPredicted RBP13.94□□□□□ -0.18
LSM2-212ENST00000477182 ZSCAN29Q8IWY8 852 aaPredicted RBP13.94□□□□□ -0.18
LSM2-212ENST00000477182 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.94□□□□□ -0.18
LSM2-212ENST00000477182 DNAJC2Q99543 621 aaKnown RBP13.94□□□□□ -0.18
LSM2-212ENST00000477182 HAUS7Q99871 368 aa13.94□□□□□ -0.18
LSM2-212ENST00000477182 IDI2Q9BXS1 227 aa13.94□□□□□ -0.18
LSM2-212ENST00000477182 HMG20BQ9P0W2 317 aa13.94□□□□□ -0.18
LSM2-212ENST00000477182 GSPT1P15170 499 aaKnown RBP13.93□□□□□ -0.18
LSM2-212ENST00000477182 ZAP70P43403 619 aa13.93□□□□□ -0.18
LSM2-212ENST00000477182 MAP3K12Q12852 859 aa13.93□□□□□ -0.18
LSM2-212ENST00000477182 DIXDC1Q155Q3 683 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms