RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 MPHOSPH6Q99547 160 aaKnown RBP12.86□□□□□ -0.35
U2AF1-209ENST00000475639 IRX2Q9BZI1 471 aaPredicted RBP12.86□□□□□ -0.35
U2AF1-209ENST00000475639 ATP6V0A2Q9Y487 856 aa12.86□□□□□ -0.35
U2AF1-209ENST00000475639 CIB2O75838 187 aa12.85□□□□□ -0.35
U2AF1-209ENST00000475639 VSNL1P62760 191 aa12.85□□□□□ -0.35
U2AF1-209ENST00000475639 CLUL1Q15846 466 aa12.85□□□□□ -0.35
U2AF1-209ENST00000475639 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.85□□□□□ -0.35
U2AF1-209ENST00000475639 TCHPQ9BT92 498 aa12.85□□□□□ -0.35
U2AF1-209ENST00000475639 CABP5Q9NP86 173 aa12.85□□□□□ -0.35
U2AF1-209ENST00000475639 SARNPP82979 210 aaKnown RBP12.85□□□□□ -0.35
U2AF1-209ENST00000475639 MAP4K1Q92918 833 aa12.85□□□□□ -0.35
U2AF1-209ENST00000475639 EPSTI1Q96J88 318 aa12.85□□□□□ -0.35
U2AF1-209ENST00000475639 USP44Q9H0E7 712 aa12.85□□□□□ -0.35
U2AF1-209ENST00000475639 RNF40O75150 1001 aa12.85□□□□□ -0.35
U2AF1-209ENST00000475639 TTLL12Q14166 644 aaPredicted RBP12.85□□□□□ -0.35
U2AF1-209ENST00000475639 MAP7Q14244 749 aa12.85□□□□□ -0.35
U2AF1-209ENST00000475639 CCT6BQ92526 530 aa12.85□□□□□ -0.35
U2AF1-209ENST00000475639 KCNK9Q9NPC2 374 aa12.85□□□□□ -0.35
U2AF1-209ENST00000475639 TMEM232C9JQI7 657 aa12.85□□□□□ -0.35
U2AF1-209ENST00000475639 CCT2P78371 535 aaKnown RBP12.85□□□□□ -0.35
U2AF1-209ENST00000475639 CCDC42Q96M95 316 aa12.85□□□□□ -0.35
U2AF1-209ENST00000475639 XRN1Q8IZH2 1706 aaKnown RBP12.84□□□□□ -0.35
U2AF1-209ENST00000475639 ATP7AQ04656 1500 aa12.84□□□□□ -0.35
U2AF1-209ENST00000475639 A0A1B0GVL5 298 aa12.84□□□□□ -0.35
U2AF1-209ENST00000475639 EEF2P13639 858 aaKnown RBP12.84□□□□□ -0.35
U2AF1-209ENST00000475639 PPP2R5AQ15172 486 aa12.84□□□□□ -0.35
U2AF1-209ENST00000475639 PPP1R42Q7Z4L9 355 aa12.84□□□□□ -0.35
U2AF1-209ENST00000475639 SGSM3Q96HU1 749 aa12.84□□□□□ -0.35
U2AF1-209ENST00000475639 JPH2Q9BR39 696 aaPredicted RBP12.84□□□□□ -0.35
U2AF1-209ENST00000475639 FAM114A2Q9NRY5 505 aa12.84□□□□□ -0.35
U2AF1-209ENST00000475639 PPFIA2O75334 1257 aa12.84□□□□□ -0.35
U2AF1-209ENST00000475639 HSPA1LP34931 641 aa12.84□□□□□ -0.35
U2AF1-209ENST00000475639 SYKP43405 635 aa12.84□□□□□ -0.35
U2AF1-209ENST00000475639 IFIT5Q13325 482 aaKnown RBP12.84□□□□□ -0.35
U2AF1-209ENST00000475639 VPS52Q8N1B4 723 aa12.84□□□□□ -0.35
U2AF1-209ENST00000475639 SEC62Q99442 399 aaKnown RBP12.84□□□□□ -0.35
U2AF1-209ENST00000475639 CLTCQ00610 1675 aaKnown RBP12.84□□□□□ -0.35
U2AF1-209ENST00000475639 NPHP4O75161 1426 aaPredicted RBP12.84□□□□□ -0.35
U2AF1-209ENST00000475639 BTBD11A6QL63 1104 aa12.84□□□□□ -0.35
U2AF1-209ENST00000475639 VSTM4Q8IW00 320 aa12.84□□□□□ -0.35
U2AF1-209ENST00000475639 C21orf2O43822 256 aa12.83□□□□□ -0.35
U2AF1-209ENST00000475639 PRPF6O94906 941 aaKnown RBP12.83□□□□□ -0.35
U2AF1-209ENST00000475639 SYF2O95926 243 aaKnown RBP12.83□□□□□ -0.35
U2AF1-209ENST00000475639 NDUFA8P51970 172 aa12.83□□□□□ -0.35
U2AF1-209ENST00000475639 KARSQ15046 597 aaKnown RBP12.83□□□□□ -0.35
U2AF1-209ENST00000475639 SEPT14Q6ZU15 432 aa12.83□□□□□ -0.35
U2AF1-209ENST00000475639 AFAP1L1Q8TED9 768 aa12.83□□□□□ -0.35
U2AF1-209ENST00000475639 ALDH8A1Q9H2A2 487 aaPredicted RBP12.83□□□□□ -0.35
U2AF1-209ENST00000475639 ARHGEF10O15013 1369 aa12.83□□□□□ -0.35
U2AF1-209ENST00000475639 RPGRIP1LQ68CZ1 1315 aa12.83□□□□□ -0.36
U2AF1-209ENST00000475639 FLIIQ13045 1269 aa12.83□□□□□ -0.36
U2AF1-209ENST00000475639 LRCH2Q5VUJ6 765 aa12.83□□□□□ -0.36
U2AF1-209ENST00000475639 RNF217Q8TC41 542 aa12.83□□□□□ -0.36
U2AF1-209ENST00000475639 FAM227BQ96M60 508 aa12.83□□□□□ -0.36
U2AF1-209ENST00000475639 MTUS1Q9ULD2 1270 aa12.83□□□□□ -0.36
U2AF1-209ENST00000475639 MAP3K5Q99683 1374 aa12.83□□□□□ -0.36
U2AF1-209ENST00000475639 NEXMIFQ5QGS0 1516 aa12.83□□□□□ -0.36
U2AF1-209ENST00000475639 TFRCP02786 760 aaKnown RBP12.83□□□□□ -0.36
U2AF1-209ENST00000475639 CCT5P48643 541 aa12.83□□□□□ -0.36
U2AF1-209ENST00000475639 RRAGBQ5VZM2 374 aa12.83□□□□□ -0.36
U2AF1-209ENST00000475639 MRPS27Q92552 414 aaKnown RBP12.83□□□□□ -0.36
U2AF1-209ENST00000475639 MMRN2Q9H8L6 949 aa12.83□□□□□ -0.36
U2AF1-209ENST00000475639 TSPY2A6NKD2 308 aa12.83□□□□□ -0.36
U2AF1-209ENST00000475639 GIPC1O14908 333 aa12.83□□□□□ -0.36
U2AF1-209ENST00000475639 PPP1R12AO14974 1030 aaPredicted RBP12.83□□□□□ -0.36
U2AF1-209ENST00000475639 RHOXF2BP0C7M4 288 aa12.83□□□□□ -0.36
U2AF1-209ENST00000475639 PDE4BQ07343 736 aa12.83□□□□□ -0.36
U2AF1-209ENST00000475639 GEN1Q17RS7 908 aa12.83□□□□□ -0.36
U2AF1-209ENST00000475639 CCDC117Q8IWD4 279 aaPredicted RBP12.83□□□□□ -0.36
U2AF1-209ENST00000475639 BAG1Q99933 345 aaPredicted RBP12.83□□□□□ -0.36
U2AF1-209ENST00000475639 RHOXF2Q9BQY4 288 aa12.83□□□□□ -0.36
U2AF1-209ENST00000475639 DESI2Q9BSY9 194 aa12.83□□□□□ -0.36
U2AF1-209ENST00000475639 CRB1P82279 1406 aa12.83□□□□□ -0.36
U2AF1-209ENST00000475639 TNNC1P63316 161 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 SCRN1Q12765 414 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 POLA2Q14181 598 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 PSMD6Q15008 389 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 VAT1LQ9HCJ6 419 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 PCDHA7Q9UN72 937 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 USP42Q9H9J4 1324 aaKnown RBP12.82□□□□□ -0.36
U2AF1-209ENST00000475639 SLC5A1P13866 664 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 RRS1Q15050 365 aaKnown RBP12.82□□□□□ -0.36
U2AF1-209ENST00000475639 TMEM67Q5HYA8 995 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 PTPRMP28827 1452 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 NLRP12P59046 1061 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 B4GALNT4Q76KP1 1039 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 MRPL44Q9H9J2 332 aaKnown RBP12.82□□□□□ -0.36
U2AF1-209ENST00000475639 ABCC6O95255 1503 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 BAG3O95817 575 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 ATP11AP98196 1134 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 TSNAXIP1Q2TAA8 658 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 CCDC38Q502W7 563 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 HS2ST1Q7LGA3 356 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 MICU3Q86XE3 530 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 CCDC89Q8N998 374 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.82□□□□□ -0.36
U2AF1-209ENST00000475639 VCX3AQ9NNX9 186 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 A1CFQ9NQ94 594 aaKnown RBP12.82□□□□□ -0.36
U2AF1-209ENST00000475639 ANKIB1Q9P2G1 1089 aa12.82□□□□□ -0.36
U2AF1-209ENST00000475639 ZRANB1Q9UGI0 708 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms