RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 CPSF6Q16630 551 aaKnown RBP eCLIP9.02□□□□□ -0.97
TM9SF3-204ENST00000475401 LRRFIP1Q32MZ4 808 aaKnown RBP9.02□□□□□ -0.97
TM9SF3-204ENST00000475401 TMEM201Q5SNT2 666 aa9.02□□□□□ -0.97
TM9SF3-204ENST00000475401 OGFOD3Q6PK18 319 aa9.02□□□□□ -0.97
TM9SF3-204ENST00000475401 MCATQ8IVS2 390 aaKnown RBP9.02□□□□□ -0.97
TM9SF3-204ENST00000475401 SHKBP1Q8TBC3 707 aa9.02□□□□□ -0.97
TM9SF3-204ENST00000475401 TJP2Q9UDY2 1190 aa9.02□□□□□ -0.97
TM9SF3-204ENST00000475401 KLHL3Q9UH77 587 aa9.02□□□□□ -0.97
TM9SF3-204ENST00000475401 ATE1O95260 518 aa9.01□□□□□ -0.97
TM9SF3-204ENST00000475401 CST3P01034 146 aaPredicted RBP9.01□□□□□ -0.97
TM9SF3-204ENST00000475401 FAM87AP0C7U9 286 aa9.01□□□□□ -0.97
TM9SF3-204ENST00000475401 CHMP4BP1P59074 171 aa9.01□□□□□ -0.97
TM9SF3-204ENST00000475401 SLBPQ14493 270 aaKnown RBP eCLIP9.01□□□□□ -0.97
TM9SF3-204ENST00000475401 NKG7Q16617 165 aa9.01□□□□□ -0.97
TM9SF3-204ENST00000475401 PRAMEF13Q5VWM6 474 aa9.01□□□□□ -0.97
TM9SF3-204ENST00000475401 FBXW10Q5XX13 1052 aa9.01□□□□□ -0.97
TM9SF3-204ENST00000475401 UBE3DQ7Z6J8 389 aa9.01□□□□□ -0.97
TM9SF3-204ENST00000475401 TOP6BLQ8N6T0 577 aa9.01□□□□□ -0.97
TM9SF3-204ENST00000475401 RASGRP4Q8TDF6 673 aa9.01□□□□□ -0.97
TM9SF3-204ENST00000475401 ACSF2Q96CM8 615 aaPredicted RBP9.01□□□□□ -0.97
TM9SF3-204ENST00000475401 EHMT1Q9H9B1 1298 aa9.01□□□□□ -0.97
TM9SF3-204ENST00000475401 PRDM10Q9NQV6 1147 aa9.01□□□□□ -0.97
TM9SF3-204ENST00000475401 EFR3BQ9Y2G0 817 aa9.01□□□□□ -0.97
TM9SF3-204ENST00000475401 TNNI2P48788 182 aa9□□□□□ -0.97
TM9SF3-204ENST00000475401 ZC3H6P61129 1189 aaKnown RBP9□□□□□ -0.97
TM9SF3-204ENST00000475401 CRBNQ96SW2 442 aa9□□□□□ -0.97
TM9SF3-204ENST00000475401 GMIPQ9P107 970 aa9□□□□□ -0.97
TM9SF3-204ENST00000475401 LEMD3Q9Y2U8 911 aa9□□□□□ -0.97
TM9SF3-204ENST00000475401 F13BP05160 661 aa8.99□□□□□ -0.97
TM9SF3-204ENST00000475401 ADMP35318 185 aa8.99□□□□□ -0.97
TM9SF3-204ENST00000475401 CLCQ05315 142 aa8.99□□□□□ -0.97
TM9SF3-204ENST00000475401 ZNF746Q6NUN9 644 aaPredicted RBP8.99□□□□□ -0.97
TM9SF3-204ENST00000475401 ARHGAP27Q6ZUM4 889 aa8.99□□□□□ -0.97
TM9SF3-204ENST00000475401 XAGE3Q8WTP9 111 aa8.99□□□□□ -0.97
TM9SF3-204ENST00000475401 CPLX3Q8WVH0 158 aa8.99□□□□□ -0.97
TM9SF3-204ENST00000475401 SEC16BQ96JE7 1060 aa8.99□□□□□ -0.97
TM9SF3-204ENST00000475401 MIPEPQ99797 713 aa8.99□□□□□ -0.97
TM9SF3-204ENST00000475401 DUSP23Q9BVJ7 150 aa8.99□□□□□ -0.97
TM9SF3-204ENST00000475401 GTF2IRD1Q9UHL9 959 aa8.99□□□□□ -0.97
TM9SF3-204ENST00000475401 FAM170BA6NMN3 283 aa8.98□□□□□ -0.97
TM9SF3-204ENST00000475401 GRIK1P39086 918 aa8.98□□□□□ -0.97
TM9SF3-204ENST00000475401 ZNF765Q7L2R6 523 aa8.98□□□□□ -0.97
TM9SF3-204ENST00000475401 SLFN12Q8IYM2 578 aa8.98□□□□□ -0.97
TM9SF3-204ENST00000475401 PHACTR4Q8IZ21 702 aa8.98□□□□□ -0.97
TM9SF3-204ENST00000475401 PSMG3-AS1Q96PY0 264 aa8.98□□□□□ -0.97
TM9SF3-204ENST00000475401 DPH2Q9BQC3 489 aaPredicted RBP8.98□□□□□ -0.97
TM9SF3-204ENST00000475401 GINM1Q9NU53 330 aa8.98□□□□□ -0.97
TM9SF3-204ENST00000475401 TPX2Q9ULW0 747 aaKnown RBP8.98□□□□□ -0.97
TM9SF3-204ENST00000475401 ADAM23O75077 832 aa8.97□□□□□ -0.97
TM9SF3-204ENST00000475401 RAG1P15918 1043 aa8.97□□□□□ -0.97
TM9SF3-204ENST00000475401 CYP7A1P22680 504 aa8.97□□□□□ -0.97
TM9SF3-204ENST00000475401 NASPP49321 788 aaPredicted RBP8.97□□□□□ -0.97
TM9SF3-204ENST00000475401 LETMD1Q6P1Q0 360 aa8.97□□□□□ -0.97
TM9SF3-204ENST00000475401 GATA6Q92908 595 aa8.97□□□□□ -0.97
TM9SF3-204ENST00000475401 PIM2Q9P1W9 311 aa8.97□□□□□ -0.97
TM9SF3-204ENST00000475401 ZNRF3Q9ULT6 936 aa8.97□□□□□ -0.97
TM9SF3-204ENST00000475401 SOX9P48436 509 aa8.96□□□□□ -0.98
TM9SF3-204ENST00000475401 ZDHHC13Q8IUH4 622 aa8.96□□□□□ -0.98
TM9SF3-204ENST00000475401 CYB5D2Q8WUJ1 264 aa8.96□□□□□ -0.98
TM9SF3-204ENST00000475401 TMEM40Q8WWA1 233 aa8.96□□□□□ -0.98
TM9SF3-204ENST00000475401 CCDC74BQ96LY2 380 aa8.96□□□□□ -0.98
TM9SF3-204ENST00000475401 LRRC4CQ9HCJ2 640 aa8.96□□□□□ -0.98
TM9SF3-204ENST00000475401 STRIP2Q9ULQ0 834 aa8.96□□□□□ -0.98
TM9SF3-204ENST00000475401 PPT2Q9UMR5 302 aa8.96□□□□□ -0.98
TM9SF3-204ENST00000475401 SLC22A31A6NKX4 558 aa8.95□□□□□ -0.98
TM9SF3-204ENST00000475401 UPK3BL1B0FP48 263 aa8.95□□□□□ -0.98
TM9SF3-204ENST00000475401 CHURC1-FNTBB4DL54 471 aa8.95□□□□□ -0.98
TM9SF3-204ENST00000475401 UPK3BL2E5RIL1 263 aa8.95□□□□□ -0.98
TM9SF3-204ENST00000475401 CYP26A1O43174 497 aa8.95□□□□□ -0.98
TM9SF3-204ENST00000475401 LEFTY1O75610 366 aa8.95□□□□□ -0.98
TM9SF3-204ENST00000475401 GBP1P32455 592 aa8.95□□□□□ -0.98
TM9SF3-204ENST00000475401 ETV3P41162 512 aa8.95□□□□□ -0.98
TM9SF3-204ENST00000475401 ARID5AQ03989 594 aa8.95□□□□□ -0.98
TM9SF3-204ENST00000475401 ARSHQ5FYA8 562 aa8.95□□□□□ -0.98
TM9SF3-204ENST00000475401 PRDM5Q9NQX1 630 aaPredicted RBP8.95□□□□□ -0.98
TM9SF3-204ENST00000475401 SLITRK5O94991 958 aa8.94□□□□□ -0.98
TM9SF3-204ENST00000475401 ATF4P18848 351 aaPredicted RBP8.94□□□□□ -0.98
TM9SF3-204ENST00000475401 EIF6P56537 245 aaKnown RBP8.94□□□□□ -0.98
TM9SF3-204ENST00000475401 OVOS1Q6IE37 1185 aa8.94□□□□□ -0.98
TM9SF3-204ENST00000475401 COX4I2Q96KJ9 171 aa8.94□□□□□ -0.98
TM9SF3-204ENST00000475401 TINF2Q9BSI4 451 aa8.94□□□□□ -0.98
TM9SF3-204ENST00000475401 SRRTQ9BXP5 876 aaKnown RBP8.94□□□□□ -0.98
TM9SF3-204ENST00000475401 GNAT3A8MTJ3 354 aa8.93□□□□□ -0.98
TM9SF3-204ENST00000475401 SSBP05455 408 aaKnown RBP eCLIP8.93□□□□□ -0.98
TM9SF3-204ENST00000475401 DNAJA1P31689 397 aaKnown RBP8.93□□□□□ -0.98
TM9SF3-204ENST00000475401 NAALADL2Q58DX5 795 aa8.93□□□□□ -0.98
TM9SF3-204ENST00000475401 INTS5Q6P9B9 1019 aaKnown RBP8.93□□□□□ -0.98
TM9SF3-204ENST00000475401 NLRC3Q7RTR2 1065 aa8.93□□□□□ -0.98
TM9SF3-204ENST00000475401 SLC43A3Q8NBI5 491 aa8.93□□□□□ -0.98
TM9SF3-204ENST00000475401 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.93□□□□□ -0.98
TM9SF3-204ENST00000475401 RNF112Q9ULX5 631 aa8.93□□□□□ -0.98
TM9SF3-204ENST00000475401 MEIS3P2A8K0S8 358 aa8.92□□□□□ -0.98
TM9SF3-204ENST00000475401 TGFB1P01137 390 aa8.92□□□□□ -0.98
TM9SF3-204ENST00000475401 CDCP2Q5VXM1 449 aa8.92□□□□□ -0.98
TM9SF3-204ENST00000475401 CCDC81Q6ZN84 652 aa8.92□□□□□ -0.98
TM9SF3-204ENST00000475401 CDH24Q86UP0 819 aa8.92□□□□□ -0.98
TM9SF3-204ENST00000475401 SHISA5Q8N114 240 aa8.92□□□□□ -0.98
TM9SF3-204ENST00000475401 OR6P1Q8NGX9 317 aa8.92□□□□□ -0.98
TM9SF3-204ENST00000475401 ATG4CQ96DT6 458 aa8.92□□□□□ -0.98
TM9SF3-204ENST00000475401 C8orf37Q96NL8 207 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms