RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 COL14A1Q05707 1796 aaKnown RBP15.61■□□□□ 0.09
NPHP4-207ENST00000470763 EXOC5O00471 708 aa15.61■□□□□ 0.09
NPHP4-207ENST00000470763 FOXP2O15409 715 aa15.61■□□□□ 0.09
NPHP4-207ENST00000470763 COBLO75128 1261 aa15.61■□□□□ 0.09
NPHP4-207ENST00000470763 ERLIN2O94905 339 aa15.61■□□□□ 0.09
NPHP4-207ENST00000470763 CPP00450 1065 aa15.61■□□□□ 0.09
NPHP4-207ENST00000470763 FGAP02671 866 aa15.61■□□□□ 0.09
NPHP4-207ENST00000470763 IFIT1P09914 478 aaKnown RBP15.61■□□□□ 0.09
NPHP4-207ENST00000470763 FXR1P51114 621 aaKnown RBP eCLIP15.61■□□□□ 0.09
NPHP4-207ENST00000470763 WHAMMP3Q1A5X7 153 aa15.61■□□□□ 0.09
NPHP4-207ENST00000470763 LMBR1LQ6UX01 489 aa15.61■□□□□ 0.09
NPHP4-207ENST00000470763 SUGP1Q8IWZ8 645 aaKnown RBP15.61■□□□□ 0.09
NPHP4-207ENST00000470763 MLKLQ8NB16 471 aa15.61■□□□□ 0.09
NPHP4-207ENST00000470763 HINFPQ9BQA5 517 aa15.61■□□□□ 0.09
NPHP4-207ENST00000470763 METTL22Q9BUU2 404 aaPredicted RBP15.61■□□□□ 0.09
NPHP4-207ENST00000470763 RGPD2P0DJD1 1756 aa15.6■□□□□ 0.09
NPHP4-207ENST00000470763 FAM237AA0A1B0GTK4 181 aa15.6■□□□□ 0.09
NPHP4-207ENST00000470763 ENC1O14682 589 aa15.6■□□□□ 0.09
NPHP4-207ENST00000470763 MFAP3LO75121 409 aa15.6■□□□□ 0.09
NPHP4-207ENST00000470763 CHRM1P11229 460 aaPredicted RBP15.6■□□□□ 0.09
NPHP4-207ENST00000470763 FBXW10Q5XX13 1052 aa15.6■□□□□ 0.09
NPHP4-207ENST00000470763 NKX2-3Q8TAU0 364 aa15.6■□□□□ 0.09
NPHP4-207ENST00000470763 HPCAL4Q9UM19 191 aa15.6■□□□□ 0.09
NPHP4-207ENST00000470763 MYO6Q9UM54 1294 aa15.6■□□□□ 0.09
NPHP4-207ENST00000470763 MORC3Q14149 939 aa15.6■□□□□ 0.09
NPHP4-207ENST00000470763 MICU3Q86XE3 530 aa15.6■□□□□ 0.09
NPHP4-207ENST00000470763 KRI1Q8N9T8 703 aaKnown RBP15.6■□□□□ 0.09
NPHP4-207ENST00000470763 HDAC6Q9UBN7 1215 aa15.6■□□□□ 0.09
NPHP4-207ENST00000470763 TRIM10Q9UDY6 481 aa15.6■□□□□ 0.09
NPHP4-207ENST00000470763 A0A087WZG4 1122 aa15.59■□□□□ 0.09
NPHP4-207ENST00000470763 CDC25AP30304 524 aa15.59■□□□□ 0.09
NPHP4-207ENST00000470763 GGCXP38435 758 aa15.59■□□□□ 0.09
NPHP4-207ENST00000470763 METAP2P50579 478 aaKnown RBP eCLIP15.59■□□□□ 0.09
NPHP4-207ENST00000470763 MNAT1P51948 309 aa15.59■□□□□ 0.09
NPHP4-207ENST00000470763 CCDC148Q8NFR7 591 aa15.59■□□□□ 0.09
NPHP4-207ENST00000470763 DACH1Q9UI36 760 aa15.59■□□□□ 0.09
NPHP4-207ENST00000470763 CASP1P29466 404 aa15.59■□□□□ 0.09
NPHP4-207ENST00000470763 EIF5P55010 431 aaKnown RBP15.59■□□□□ 0.09
NPHP4-207ENST00000470763 TRDNQ13061 729 aa15.59■□□□□ 0.09
NPHP4-207ENST00000470763 APTXQ7Z2E3 356 aaKnown RBP15.59■□□□□ 0.09
NPHP4-207ENST00000470763 FBXL16Q8N461 479 aa15.59■□□□□ 0.09
NPHP4-207ENST00000470763 NCOA7Q8NI08 942 aa15.59■□□□□ 0.09
NPHP4-207ENST00000470763 IP6K1Q92551 441 aa15.59■□□□□ 0.09
NPHP4-207ENST00000470763 SLF1Q9BQI6 1058 aa15.59■□□□□ 0.09
NPHP4-207ENST00000470763 NAA15Q9BXJ9 866 aaKnown RBP15.59■□□□□ 0.09
NPHP4-207ENST00000470763 KAT14Q9H8E8 782 aa15.59■□□□□ 0.09
NPHP4-207ENST00000470763 SENP2Q9HC62 589 aa15.59■□□□□ 0.09
NPHP4-207ENST00000470763 CDHR2Q9BYE9 1310 aa15.59■□□□□ 0.09
NPHP4-207ENST00000470763 HEG1Q9ULI3 1381 aa15.59■□□□□ 0.09
NPHP4-207ENST00000470763 GYPCP04921 128 aa15.59■□□□□ 0.09
NPHP4-207ENST00000470763 ZC3H6P61129 1189 aaKnown RBP15.59■□□□□ 0.09
NPHP4-207ENST00000470763 ERVK-24P63145 666 aa15.59■□□□□ 0.09
NPHP4-207ENST00000470763 SMYD4Q8IYR2 804 aaPredicted RBP15.59■□□□□ 0.09
NPHP4-207ENST00000470763 MYL10Q9BUA6 226 aa15.59■□□□□ 0.09
NPHP4-207ENST00000470763 CCT6AP40227 531 aaKnown RBP15.58■□□□□ 0.08
NPHP4-207ENST00000470763 TUBB2AQ13885 445 aa15.58■□□□□ 0.08
NPHP4-207ENST00000470763 CHRNA2Q15822 529 aa15.58■□□□□ 0.08
NPHP4-207ENST00000470763 WDR93Q6P2C0 686 aa15.58■□□□□ 0.08
NPHP4-207ENST00000470763 CCDC91Q7Z6B0 441 aa15.58■□□□□ 0.08
NPHP4-207ENST00000470763 TUBB2BQ9BVA1 445 aa15.58■□□□□ 0.08
NPHP4-207ENST00000470763 PRDM11Q9NQV5 511 aa15.58■□□□□ 0.08
NPHP4-207ENST00000470763 GUCA1BQ9UMX6 200 aa15.58■□□□□ 0.08
NPHP4-207ENST00000470763 TTF2Q9UNY4 1162 aaKnown RBP15.58■□□□□ 0.08
NPHP4-207ENST00000470763 SRGAP2O75044 1071 aa15.58■□□□□ 0.08
NPHP4-207ENST00000470763 AARSP49588 968 aaKnown RBP eCLIP15.58■□□□□ 0.08
NPHP4-207ENST00000470763 PLCD1P51178 756 aa15.58■□□□□ 0.08
NPHP4-207ENST00000470763 STIM1Q13586 685 aa15.58■□□□□ 0.08
NPHP4-207ENST00000470763 ANKRD13DQ6ZTN6 518 aa15.58■□□□□ 0.08
NPHP4-207ENST00000470763 USP49Q70CQ1 688 aa15.58■□□□□ 0.08
NPHP4-207ENST00000470763 CAPZA3Q96KX2 299 aa15.58■□□□□ 0.08
NPHP4-207ENST00000470763 LTN1O94822 1766 aa15.58■□□□□ 0.08
NPHP4-207ENST00000470763 ARHGAP25P42331 645 aa15.57■□□□□ 0.08
NPHP4-207ENST00000470763 TTC19Q6DKK2 380 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-207ENST00000470763 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.57■□□□□ 0.08
NPHP4-207ENST00000470763 FAM169AQ9Y6X4 670 aa15.57■□□□□ 0.08
NPHP4-207ENST00000470763 RNF225M0QZC1 329 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-207ENST00000470763 ONECUT3O60422 494 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-207ENST00000470763 SARSP49591 514 aaKnown RBP15.57■□□□□ 0.08
NPHP4-207ENST00000470763 TUBB4BP68371 445 aa15.57■□□□□ 0.08
NPHP4-207ENST00000470763 AMPD2Q01433 879 aa15.57■□□□□ 0.08
NPHP4-207ENST00000470763 TRIM29Q14134 588 aa15.57■□□□□ 0.08
NPHP4-207ENST00000470763 CT47A1Q5JQC4 288 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-207ENST00000470763 CTCFLQ8NI51 663 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-207ENST00000470763 TFR2Q9UP52 801 aa15.57■□□□□ 0.08
NPHP4-207ENST00000470763 ZMYM6O95789 1325 aa15.57■□□□□ 0.08
NPHP4-207ENST00000470763 MYBL2P10244 700 aa15.57■□□□□ 0.08
NPHP4-207ENST00000470763 CD44P16070 742 aaKnown RBP15.57■□□□□ 0.08
NPHP4-207ENST00000470763 AFMP43652 599 aa15.57■□□□□ 0.08
NPHP4-207ENST00000470763 RABL6Q3YEC7 729 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-207ENST00000470763 ATG9AQ7Z3C6 839 aa15.57■□□□□ 0.08
NPHP4-207ENST00000470763 ZNF594Q96JF6 807 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-207ENST00000470763 MMS19Q96T76 1030 aa15.57■□□□□ 0.08
NPHP4-207ENST00000470763 ADD3Q9UEY8 706 aaKnown RBP15.57■□□□□ 0.08
NPHP4-207ENST00000470763 ZC3H4Q9UPT8 1303 aaKnown RBP15.57■□□□□ 0.08
NPHP4-207ENST00000470763 BRWD3Q6RI45 1802 aa15.56■□□□□ 0.08
NPHP4-207ENST00000470763 C4AP0C0L4 1744 aa15.56■□□□□ 0.08
NPHP4-207ENST00000470763 C4BP0C0L5 1744 aa15.56■□□□□ 0.08
NPHP4-207ENST00000470763 PSEN1P49768 467 aa15.56■□□□□ 0.08
NPHP4-207ENST00000470763 CRACR2AQ9BSW2 395 aa15.56■□□□□ 0.08
NPHP4-207ENST00000470763 CXorf56Q9H5V9 222 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms