RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 XAGE3Q8WTP9 111 aa9.12□□□□□ -0.95
SSB-209ENST00000470621 NT5C1AQ9BXI3 368 aa9.12□□□□□ -0.95
SSB-209ENST00000470621 OSBPL1AQ9BXW6 950 aa9.12□□□□□ -0.95
SSB-209ENST00000470621 KRTAP9-9Q9BYP9 154 aa9.12□□□□□ -0.95
SSB-209ENST00000470621 KRTAP9-4Q9BYQ2 154 aa9.12□□□□□ -0.95
SSB-209ENST00000470621 REV1Q9UBZ9 1251 aa9.12□□□□□ -0.95
SSB-209ENST00000470621 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.12□□□□□ -0.95
SSB-209ENST00000470621 U3KQE9 123 aa9.12□□□□□ -0.95
SSB-209ENST00000470621 PRR36Q9H6K5 1346 aa9.11□□□□□ -0.95
SSB-209ENST00000470621 HTR3BO95264 441 aa9.11□□□□□ -0.95
SSB-209ENST00000470621 PDE4BQ07343 736 aa9.11□□□□□ -0.95
SSB-209ENST00000470621 PAK2Q13177 524 aa9.11□□□□□ -0.95
SSB-209ENST00000470621 OGFOD3Q6PK18 319 aa9.11□□□□□ -0.95
SSB-209ENST00000470621 TMEM87BQ96K49 555 aa9.11□□□□□ -0.95
SSB-209ENST00000470621 ACBD3Q9H3P7 528 aa9.11□□□□□ -0.95
SSB-209ENST00000470621 IGSF5Q9NSI5 407 aa9.11□□□□□ -0.95
SSB-209ENST00000470621 PCDHB14Q9Y5E9 798 aa9.11□□□□□ -0.95
SSB-209ENST00000470621 ROBO2Q9HCK4 1378 aa9.11□□□□□ -0.95
SSB-209ENST00000470621 UPK3BL1B0FP48 263 aa9.1□□□□□ -0.95
SSB-209ENST00000470621 UPK3BL2E5RIL1 263 aa9.1□□□□□ -0.95
SSB-209ENST00000470621 E9PSI1 815 aa9.1□□□□□ -0.95
SSB-209ENST00000470621 LRIG2O94898 1065 aa9.1□□□□□ -0.95
SSB-209ENST00000470621 SLITRK5O94991 958 aa9.1□□□□□ -0.95
SSB-209ENST00000470621 CAP2P40123 477 aa9.1□□□□□ -0.95
SSB-209ENST00000470621 CLCQ05315 142 aa9.1□□□□□ -0.95
SSB-209ENST00000470621 MRPL41Q8IXM3 137 aaKnown RBP9.1□□□□□ -0.95
SSB-209ENST00000470621 NKD1Q969G9 470 aa9.1□□□□□ -0.95
SSB-209ENST00000470621 FOXQ1Q9C009 403 aa9.1□□□□□ -0.95
SSB-209ENST00000470621 PRDM10Q9NQV6 1147 aa9.1□□□□□ -0.95
SSB-209ENST00000470621 ATG3Q9NT62 314 aa9.1□□□□□ -0.95
SSB-209ENST00000470621 ADAM30Q9UKF2 790 aa9.1□□□□□ -0.95
SSB-209ENST00000470621 COL17A1Q9UMD9 1497 aaPredicted RBP9.09□□□□□ -0.95
SSB-209ENST00000470621 MED26O95402 600 aa9.09□□□□□ -0.95
SSB-209ENST00000470621 TNNI2P48788 182 aa9.09□□□□□ -0.95
SSB-209ENST00000470621 DIEXFQ68CQ4 756 aaKnown RBP9.09□□□□□ -0.95
SSB-209ENST00000470621 GK5Q6ZS86 529 aa9.09□□□□□ -0.95
SSB-209ENST00000470621 MCATQ8IVS2 390 aaKnown RBP9.09□□□□□ -0.95
SSB-209ENST00000470621 SLITRK4Q8IW52 837 aa9.09□□□□□ -0.95
SSB-209ENST00000470621 MIPEPQ99797 713 aa9.09□□□□□ -0.95
SSB-209ENST00000470621 TGIF2Q9GZN2 237 aa9.09□□□□□ -0.95
SSB-209ENST00000470621 PIM2Q9P1W9 311 aa9.09□□□□□ -0.95
SSB-209ENST00000470621 CST3P01034 146 aaPredicted RBP9.08□□□□□ -0.96
SSB-209ENST00000470621 ERCC5P28715 1186 aaPredicted RBP9.08□□□□□ -0.96
SSB-209ENST00000470621 MCM4P33991 863 aa9.08□□□□□ -0.96
SSB-209ENST00000470621 CD97P48960 835 aa9.08□□□□□ -0.96
SSB-209ENST00000470621 TMEM201Q5SNT2 666 aa9.08□□□□□ -0.96
SSB-209ENST00000470621 GIMAP7Q8NHV1 300 aa9.08□□□□□ -0.96
SSB-209ENST00000470621 RIN3Q8TB24 985 aa9.08□□□□□ -0.96
SSB-209ENST00000470621 METTL22Q9BUU2 404 aaPredicted RBP9.08□□□□□ -0.96
SSB-209ENST00000470621 LRRC4CQ9HCJ2 640 aa9.08□□□□□ -0.96
SSB-209ENST00000470621 KLHL3Q9UH77 587 aa9.08□□□□□ -0.96
SSB-209ENST00000470621 CNTNAP4Q9C0A0 1308 aa9.07□□□□□ -0.96
SSB-209ENST00000470621 CHURC1-FNTBB4DL54 471 aa9.07□□□□□ -0.96
SSB-209ENST00000470621 EOMESO95936 686 aa9.07□□□□□ -0.96
SSB-209ENST00000470621 SSTR4P31391 388 aa9.07□□□□□ -0.96
SSB-209ENST00000470621 SLC6A19Q695T7 634 aa9.07□□□□□ -0.96
SSB-209ENST00000470621 FAM181AQ8N9Y4 354 aa9.07□□□□□ -0.96
SSB-209ENST00000470621 FAM13CQ8NE31 585 aa9.07□□□□□ -0.96
SSB-209ENST00000470621 HEXIM2Q96MH2 286 aaKnown RBP9.07□□□□□ -0.96
SSB-209ENST00000470621 LEMD3Q9Y2U8 911 aa9.07□□□□□ -0.96
SSB-209ENST00000470621 CYP27A1Q02318 531 aa9.06□□□□□ -0.96
SSB-209ENST00000470621 DUSP27Q5VZP5 1158 aa9.06□□□□□ -0.96
SSB-209ENST00000470621 FAM214BQ7L5A3 538 aa9.06□□□□□ -0.96
SSB-209ENST00000470621 ANTXR1Q9H6X2 564 aa9.06□□□□□ -0.96
SSB-209ENST00000470621 CYP26A1O43174 497 aa9.05□□□□□ -0.96
SSB-209ENST00000470621 PAX4O43316 350 aa9.05□□□□□ -0.96
SSB-209ENST00000470621 FOSL1P15407 271 aa9.05□□□□□ -0.96
SSB-209ENST00000470621 CPSF6Q16630 551 aaKnown RBP eCLIP9.05□□□□□ -0.967e-8■■□□□ 12.2
SSB-209ENST00000470621 CYP27C1Q4G0S4 372 aa9.05□□□□□ -0.96
SSB-209ENST00000470621 LETMD1Q6P1Q0 360 aa9.05□□□□□ -0.96
SSB-209ENST00000470621 MFSD2AQ8NA29 543 aa9.05□□□□□ -0.96
SSB-209ENST00000470621 CCSER2Q9H7U1 834 aa9.05□□□□□ -0.96
SSB-209ENST00000470621 ZC3H7BQ9UGR2 993 aaKnown RBP9.05□□□□□ -0.96
SSB-209ENST00000470621 ATE1O95260 518 aa9.04□□□□□ -0.96
SSB-209ENST00000470621 GJA8P48165 433 aa9.04□□□□□ -0.96
SSB-209ENST00000470621 MSMPQ1L6U9 139 aa9.04□□□□□ -0.96
SSB-209ENST00000470621 OVOS1Q6IE37 1185 aa9.04□□□□□ -0.96
SSB-209ENST00000470621 GPRASP2Q96D09 838 aa9.04□□□□□ -0.96
SSB-209ENST00000470621 EHMT1Q9H9B1 1298 aa9.04□□□□□ -0.96
SSB-209ENST00000470621 GINM1Q9NU53 330 aa9.04□□□□□ -0.96
SSB-209ENST00000470621 SLC22A31A6NKX4 558 aa9.03□□□□□ -0.96
SSB-209ENST00000470621 CDH24Q86UP0 819 aa9.03□□□□□ -0.96
SSB-209ENST00000470621 REXO1Q8N1G1 1221 aaKnown RBP9.03□□□□□ -0.96
SSB-209ENST00000470621 PPT2Q9UMR5 302 aa9.03□□□□□ -0.96
SSB-209ENST00000470621 COBLO75128 1261 aa9.02□□□□□ -0.97
SSB-209ENST00000470621 ZNF165P49910 485 aa9.02□□□□□ -0.97
SSB-209ENST00000470621 CCDC81Q6ZN84 652 aa9.02□□□□□ -0.97
SSB-209ENST00000470621 SLFN12Q8IYM2 578 aa9.02□□□□□ -0.97
SSB-209ENST00000470621 PLD6Q8N2A8 252 aaKnown RBP9.02□□□□□ -0.97
SSB-209ENST00000470621 RASGRP4Q8TDF6 673 aa9.02□□□□□ -0.97
SSB-209ENST00000470621 PPP1R13LQ8WUF5 828 aa9.02□□□□□ -0.97
SSB-209ENST00000470621 KIAA1324LA8MWY0 1029 aaPredicted RBP9.01□□□□□ -0.97
SSB-209ENST00000470621 PRR33A8MZF0 331 aa9.01□□□□□ -0.97
SSB-209ENST00000470621 ITIH2P19823 946 aa9.01□□□□□ -0.97
SSB-209ENST00000470621 SPINK2P20155 84 aa9.01□□□□□ -0.97
SSB-209ENST00000470621 YARSP54577 528 aaKnown RBP9.01□□□□□ -0.97
SSB-209ENST00000470621 OXCT1P55809 520 aa9.01□□□□□ -0.97
SSB-209ENST00000470621 ARSHQ5FYA8 562 aa9.01□□□□□ -0.97
SSB-209ENST00000470621 DNAJB8Q8NHS0 232 aa9.01□□□□□ -0.97
SSB-209ENST00000470621 BAHD1Q8TBE0 780 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms