RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 ZYXQ15942 572 aaKnown RBP5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 SV2CQ496J9 727 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 DALRD3Q5D0E6 543 aaKnown RBP5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 TMEM67Q5HYA8 995 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 OVOS1Q6IE37 1185 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 MRM1Q6IN84 353 aaKnown RBP5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 LRFN4Q6PJG9 635 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 C12orf40Q86WS4 652 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 CACTIN-AS1Q8N1I8 211 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 CHAC2Q8WUX2 184 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 EDARADDQ8WWZ3 215 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 ATG4CQ96DT6 458 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 LPIN3Q9BQK8 851 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 USP26Q9BXU7 913 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 NAGPAQ9UK23 515 aa5.07□□□□□ -1.6
HMGB1P25-201ENST00000468402 MEIS3P2A8K0S8 358 aa5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 NEURL1BA8MQ27 555 aa5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 GFRA2O00451 464 aa5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 C2CD2LO14523 706 aa5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 SUSD5O60279 629 aa5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 L1CAMP32004 1257 aa5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 ODR4Q5SWX8 454 aa5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 NIM1KQ8IY84 436 aa5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 UBR7Q8N806 425 aa5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 ZBTB38Q8NAP3 1195 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 STAG1Q8WVM7 1258 aa5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 ZNF669Q96BR6 464 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 MFSD3Q96ES6 412 aa5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 SLC9A7Q96T83 725 aa5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 PSMD1Q99460 953 aa5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 CARD10Q9BWT7 1032 aa5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 KRTAP4-8Q9BYQ9 185 aa5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 CCDC86Q9H6F5 360 aaKnown RBP5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 JPH1Q9HDC5 661 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 RAD18Q9NS91 495 aa5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 FRRS1LQ9P0K9 344 aa5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 TCEAL9Q9UHQ7 104 aa5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 GDF2Q9UK05 429 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P25-201ENST00000468402 LTBP3Q9NS15 1303 aa5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 C1QTNF9BB2RNN3 333 aa5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 ECEL1O95672 775 aa5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 TP53P04637 393 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 ITGB2P05107 769 aa5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 SLFN14P0C7P3 912 aa5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 GRK4P32298 578 aa5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 PIP4K2BP78356 416 aa5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 NFKB2Q00653 900 aa5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 FAM50AQ14320 339 aaKnown RBP5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 CBX2Q14781 532 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 SLC10A6Q3KNW5 377 aa5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 INTS3Q68E01 1043 aaKnown RBP5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 KRT26Q7Z3Y9 468 aa5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 FMNL3Q8IVF7 1028 aa5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 PHACTR4Q8IZ21 702 aa5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 GOLGA6L1Q8N7Z2 621 aa5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 TNFRSF25Q93038 417 aa5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 EPN3Q9H201 632 aa5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 ATP8A1Q9Y2Q0 1164 aa5.05□□□□□ -1.6
HMGB1P25-201ENST00000468402 PRR36Q9H6K5 1346 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 UPK3BL1B0FP48 263 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 CHURC1-FNTBB4DL54 471 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 UPK3BL2E5RIL1 263 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 GNB5O14775 395 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 FSCN2O14926 492 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 ACRP10323 421 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 NAT2P11245 290 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 SOX5P35711 763 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 NLRP12P59046 1061 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 BBS9Q3SYG4 887 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 ZC3H12BQ5HYM0 836 aaKnown RBP5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 WWC2Q6AWC2 1192 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 CNNM4Q6P4Q7 775 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 JAMLQ86YT9 394 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 TAB3Q8N5C8 712 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 JMYQ8N9B5 988 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 FAM13CQ8NE31 585 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 ATL2Q8NHH9 583 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 NINJ1Q92982 152 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 DHRS1Q96LJ7 313 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 APBA2Q99767 749 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 IER2Q9BTL4 223 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 SOX17Q9H6I2 414 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 CAAP1Q9H8G2 361 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 CNNM2Q9H8M5 875 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 AVENQ9NQS1 362 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 KRT82Q9NSB4 513 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 TYW1Q9NV66 732 aaKnown RBP5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 MCM8Q9UJA3 840 aa5.04□□□□□ -1.6
HMGB1P25-201ENST00000468402 ELOA3CA0A087WX78 387 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 CCDC163A0A0D9SF12 145 aa5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 ELOA3DA6NLF2 546 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 ADARB2-AS1A8MUL3 147 aa5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 SHISA8B8ZZ34 492 aa5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 ZNF862O60290 1169 aa5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 RAPGEF3O95398 923 aa5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 VIL1P09327 827 aaKnown RBP5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 ARAFP10398 606 aa5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 POLR2BP30876 1174 aaKnown RBP5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 GBP1P32455 592 aa5.03□□□□□ -1.6
HMGB1P25-201ENST00000468402 YARSP54577 528 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms