RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 PLXNA1Q9UIW2 1896 aa12.81□□□□□ -0.36
HDAC3-203ENST00000467533 TRIM43BA6NCK2 446 aa12.81□□□□□ -0.36
HDAC3-203ENST00000467533 TBC1D12O60347 775 aa12.81□□□□□ -0.36
HDAC3-203ENST00000467533 ALDH1L1O75891 902 aa12.81□□□□□ -0.36
HDAC3-203ENST00000467533 BTDP43251 543 aa12.81□□□□□ -0.36
HDAC3-203ENST00000467533 CCDC85BQ15834 202 aaPredicted RBP12.81□□□□□ -0.36
HDAC3-203ENST00000467533 AKNAD1Q5T1N1 836 aa12.81□□□□□ -0.36
HDAC3-203ENST00000467533 WDR78Q5VTH9 848 aa12.81□□□□□ -0.36
HDAC3-203ENST00000467533 ARRDC4Q8NCT1 418 aa12.81□□□□□ -0.36
HDAC3-203ENST00000467533 TRIM43Q96BQ3 446 aaPredicted RBP12.81□□□□□ -0.36
HDAC3-203ENST00000467533 EDC3Q96F86 508 aaKnown RBP12.81□□□□□ -0.36
HDAC3-203ENST00000467533 NECAB3Q96P71 396 aaPredicted RBP12.81□□□□□ -0.36
HDAC3-203ENST00000467533 SRCIN1Q9C0H9 1055 aa12.81□□□□□ -0.36
HDAC3-203ENST00000467533 FLRT1Q9NZU1 646 aa12.81□□□□□ -0.36
HDAC3-203ENST00000467533 RBPJLQ9UBG7 517 aa12.81□□□□□ -0.36
HDAC3-203ENST00000467533 TCF20Q9UGU0 1960 aaKnown RBP12.81□□□□□ -0.36
HDAC3-203ENST00000467533 SALL1Q9NSC2 1324 aa12.81□□□□□ -0.36
HDAC3-203ENST00000467533 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.8□□□□□ -0.36
HDAC3-203ENST00000467533 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.8□□□□□ -0.36
HDAC3-203ENST00000467533 GLRX3O76003 335 aaKnown RBP12.8□□□□□ -0.36
HDAC3-203ENST00000467533 HOXA7P31268 230 aaPredicted RBP12.8□□□□□ -0.36
HDAC3-203ENST00000467533 CAP2P40123 477 aa12.8□□□□□ -0.36
HDAC3-203ENST00000467533 EPHB4P54760 987 aa12.8□□□□□ -0.36
HDAC3-203ENST00000467533 ATP2B2Q01814 1243 aa12.8□□□□□ -0.36
HDAC3-203ENST00000467533 SNX17Q15036 470 aa12.8□□□□□ -0.36
HDAC3-203ENST00000467533 Q3C1V9 767 aa12.8□□□□□ -0.36
HDAC3-203ENST00000467533 GTF3C2Q8WUA4 911 aaPredicted RBP12.8□□□□□ -0.36
HDAC3-203ENST00000467533 LPIN2Q92539 896 aa12.8□□□□□ -0.36
HDAC3-203ENST00000467533 PRDM12Q9H4Q4 367 aa12.8□□□□□ -0.36
HDAC3-203ENST00000467533 GNL3LQ9NVN8 582 aaKnown RBP12.8□□□□□ -0.36
HDAC3-203ENST00000467533 NDUFB9Q9Y6M9 179 aa12.8□□□□□ -0.36
HDAC3-203ENST00000467533 NBPF7P0C2Y1 421 aaPredicted RBP12.79□□□□□ -0.36
HDAC3-203ENST00000467533 CYP2C19P33261 490 aa12.79□□□□□ -0.36
HDAC3-203ENST00000467533 BACE1P56817 501 aa12.79□□□□□ -0.36
HDAC3-203ENST00000467533 FPGSQ05932 587 aa12.79□□□□□ -0.36
HDAC3-203ENST00000467533 RABL6Q3YEC7 729 aaPredicted RBP12.79□□□□□ -0.36
HDAC3-203ENST00000467533 ANO1Q5XXA6 986 aa12.79□□□□□ -0.36
HDAC3-203ENST00000467533 SLF2Q8IX21 1173 aa12.79□□□□□ -0.36
HDAC3-203ENST00000467533 ZGPATQ8N5A5 531 aaKnown RBP12.79□□□□□ -0.36
HDAC3-203ENST00000467533 LRFN3Q9BTN0 628 aa12.79□□□□□ -0.36
HDAC3-203ENST00000467533 DENND2AQ9ULE3 1009 aa12.79□□□□□ -0.36
HDAC3-203ENST00000467533 SIPA1L1O43166 1804 aa12.78□□□□□ -0.36
HDAC3-203ENST00000467533 CLTBP09497 229 aa12.78□□□□□ -0.36
HDAC3-203ENST00000467533 RAG1P15918 1043 aa12.78□□□□□ -0.36
HDAC3-203ENST00000467533 IGFBP4P22692 258 aa12.78□□□□□ -0.36
HDAC3-203ENST00000467533 CCDC129Q6ZRS4 1044 aa12.78□□□□□ -0.36
HDAC3-203ENST00000467533 ANKRD44Q8N8A2 993 aa12.78□□□□□ -0.36
HDAC3-203ENST00000467533 TRPV1Q8NER1 839 aa12.78□□□□□ -0.36
HDAC3-203ENST00000467533 FERMT2Q96AC1 680 aa12.78□□□□□ -0.36
HDAC3-203ENST00000467533 WDR18Q9BV38 432 aa12.78□□□□□ -0.36
HDAC3-203ENST00000467533 IVNS1ABPQ9Y6Y0 642 aa12.78□□□□□ -0.36
HDAC3-203ENST00000467533 MROH7-TTC4A0A0A0MT08 1334 aa12.78□□□□□ -0.36
HDAC3-203ENST00000467533 NCOR1O75376 2440 aa12.78□□□□□ -0.36
HDAC3-203ENST00000467533 ZNF236Q9UL36 1845 aa12.77□□□□□ -0.37
HDAC3-203ENST00000467533 SLC15A5A6NIM6 579 aa12.77□□□□□ -0.37
HDAC3-203ENST00000467533 CYBAP13498 195 aa12.77□□□□□ -0.37
HDAC3-203ENST00000467533 ITGB8P26012 769 aa12.77□□□□□ -0.37
HDAC3-203ENST00000467533 ADCYAP1R1P41586 468 aa12.77□□□□□ -0.37
HDAC3-203ENST00000467533 CCNA1P78396 465 aa12.77□□□□□ -0.37
HDAC3-203ENST00000467533 TLE2Q04725 743 aa12.77□□□□□ -0.37
HDAC3-203ENST00000467533 RRP1BQ14684 758 aaKnown RBP12.77□□□□□ -0.37
HDAC3-203ENST00000467533 ALYREFQ86V81 257 aaKnown RBP12.77□□□□□ -0.37
HDAC3-203ENST00000467533 TSPYL2Q9H2G4 693 aaPredicted RBP12.77□□□□□ -0.37
HDAC3-203ENST00000467533 ABCF2Q9UG63 623 aa12.77□□□□□ -0.37
HDAC3-203ENST00000467533 TACC3Q9Y6A5 838 aa12.77□□□□□ -0.37
HDAC3-203ENST00000467533 FANCIQ9NVI1 1328 aa12.77□□□□□ -0.37
HDAC3-203ENST00000467533 SEMA3EO15041 775 aa12.76□□□□□ -0.37
HDAC3-203ENST00000467533 VAMP4O75379 141 aa12.76□□□□□ -0.37
HDAC3-203ENST00000467533 PTPREP23469 700 aa12.76□□□□□ -0.37
HDAC3-203ENST00000467533 ATP2B3Q16720 1220 aa12.76□□□□□ -0.37
HDAC3-203ENST00000467533 TMEM31Q5JXX7 168 aa12.76□□□□□ -0.37
HDAC3-203ENST00000467533 NPLOC4Q8TAT6 608 aa12.76□□□□□ -0.37
HDAC3-203ENST00000467533 GBF1Q92538 1859 aa12.76□□□□□ -0.37
HDAC3-203ENST00000467533 C19orf81C9J6K1 198 aa12.75□□□□□ -0.37
HDAC3-203ENST00000467533 USP17L10C9JJH3 530 aa12.75□□□□□ -0.37
HDAC3-203ENST00000467533 EYA2O00167 538 aa12.75□□□□□ -0.37
HDAC3-203ENST00000467533 PQBP1O60828 265 aaKnown RBP12.75□□□□□ -0.37
HDAC3-203ENST00000467533 ASNSP08243 561 aa12.75□□□□□ -0.37
HDAC3-203ENST00000467533 PBX2P40425 430 aa12.75□□□□□ -0.37
HDAC3-203ENST00000467533 PHKA1P46020 1223 aa12.75□□□□□ -0.37
HDAC3-203ENST00000467533 RHBDL3P58872 404 aa12.75□□□□□ -0.37
HDAC3-203ENST00000467533 C1orf53Q5VUE5 145 aa12.75□□□□□ -0.37
HDAC3-203ENST00000467533 SNX27Q96L92 541 aa12.75□□□□□ -0.37
HDAC3-203ENST00000467533 PBX4Q9BYU1 374 aa12.75□□□□□ -0.37
HDAC3-203ENST00000467533 EPHX3Q9H6B9 360 aa12.75□□□□□ -0.37
HDAC3-203ENST00000467533 CXXC1Q9P0U4 656 aaPredicted RBP12.75□□□□□ -0.37
HDAC3-203ENST00000467533 HERC5Q9UII4 1024 aaKnown RBP12.75□□□□□ -0.37
HDAC3-203ENST00000467533 RABGAP1Q9Y3P9 1069 aa12.75□□□□□ -0.37
HDAC3-203ENST00000467533 LRRC37A2A6NM11 1700 aa12.74□□□□□ -0.37
HDAC3-203ENST00000467533 IL16Q14005 1332 aa12.74□□□□□ -0.37
HDAC3-203ENST00000467533 KIAA0355O15063 1070 aa12.74□□□□□ -0.37
HDAC3-203ENST00000467533 NPM3O75607 178 aaKnown RBP12.74□□□□□ -0.37
HDAC3-203ENST00000467533 HOXC6P09630 235 aa12.74□□□□□ -0.37
HDAC3-203ENST00000467533 ADGRE1Q14246 886 aa12.74□□□□□ -0.37
HDAC3-203ENST00000467533 GRB14Q14449 540 aa12.74□□□□□ -0.37
HDAC3-203ENST00000467533 LRRC41Q15345 812 aa12.74□□□□□ -0.37
HDAC3-203ENST00000467533 WWC1Q8IX03 1113 aa12.74□□□□□ -0.37
HDAC3-203ENST00000467533 MICALL1Q8N3F8 863 aa12.74□□□□□ -0.37
HDAC3-203ENST00000467533 FAM163AQ96GL9 167 aaPredicted RBP12.74□□□□□ -0.37
HDAC3-203ENST00000467533 GPR75-ASB3A0A0A6YYF3 556 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms