RNA–Protein interactions for RNA: ENST00000466913.1

MUC1-215, Transcript of mucin 1, cell surface associated, human

TSL 1 (best)

Gene MUC1, Length 177 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-215	ENST00000466913	ARHGEF5	Q12774	1597 aa		4.38	□□□□□ -1.71
MUC1-215	ENST00000466913	SPAG9	O60271	1321 aa	Known RBP	4.38	□□□□□ -1.71
MUC1-215	ENST00000466913	HOXA10	P31260	410 aa	Predicted RBP	4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	ADM	P35318	185 aa		4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	CEBPA	P49715	358 aa	Predicted RBP	4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	HNRNPM	P52272	730 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	LRRC14	Q15048	493 aa		4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	MSMP	Q1L6U9	139 aa		4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	MAP1S	Q66K74	1059 aa	Predicted RBP	4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	PDZD3	Q86UT5	571 aa		4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	SMYD4	Q8IYR2	804 aa	Predicted RBP	4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	C3orf58	Q8NDZ4	430 aa		4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	GATA6	Q92908	595 aa		4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	FRMD6	Q96NE9	622 aa		4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	NECAB3	Q96P71	396 aa	Predicted RBP	4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	FANCD2OS	Q96PS1	177 aa		4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	C12orf49	Q9H741	205 aa		4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	LRRC4C	Q9HCJ2	640 aa		4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	PICK1	Q9NRD5	415 aa		4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	FAM8A1	Q9UBU6	413 aa		4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	ZNF142	P52746	1687 aa	Predicted RBP	4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	UHRF1BP1	Q6BDS2	1440 aa		4.37	□□□□□ -1.71
MUC1-215	ENST00000466913	MAP3K1	Q13233	1512 aa		4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	KDM5D	Q9BY66	1539 aa		4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	MAST1	Q9Y2H9	1570 aa		4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	STRC	Q7RTU9	1775 aa		4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	ZNF862	O60290	1169 aa		4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	LDHB	P07195	334 aa	Known RBP	4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	P4HB	P07237	508 aa	Known RBP	4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	HCLS1	P14317	486 aa	Predicted RBP	4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	TTLL4	Q14679	1199 aa		4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	ZNF765	Q7L2R6	523 aa		4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	ANKRD24	Q8TF21	1146 aa		4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	WDR89	Q96FK6	387 aa	Predicted RBP	4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	FBXL18	Q96ME1	805 aa		4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	SSU72	Q9NP77	194 aa	Known RBP	4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	BSDC1	Q9NW68	430 aa	Predicted RBP	4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	TTF2	Q9UNY4	1162 aa	Known RBP	4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	PCDHGC5	Q9Y5F6	944 aa		4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	OAS3	Q9Y6K5	1087 aa	Known RBP	4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	MYOM3	Q5VTT5	1437 aa		4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	CNTLN	Q9NXG0	1405 aa		4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	4.36	□□□□□ -1.71
MUC1-215	ENST00000466913	MROH1	Q8NDA8	1641 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	RNF17	Q9BXT8	1623 aa	Known RBP	4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	PTPN23	Q9H3S7	1636 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	CEP152	O94986	1710 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	ENC1	O14682	589 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	DYNC1LI2	O43237	492 aa	Predicted RBP	4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	PAX4	O43316	350 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	ADAMTS4	O75173	837 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	FBXO24	O75426	580 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	TRIM37	O94972	964 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	PRNP	P04156	253 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	USP17L7	P0C7H9	530 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	PDIA4	P13667	645 aa	Known RBP	4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	ERVK-24	P63145	666 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	SCARA3	Q6AZY7	606 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	LLGL2	Q6P1M3	1020 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	OGFOD3	Q6PK18	319 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	SEZ6L2	Q6UXD5	910 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	ARHGAP27	Q6ZUM4	889 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	SND1	Q7KZF4	910 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	AGBL5	Q8NDL9	886 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	FLCN	Q8NFG4	579 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	STK35	Q8TDR2	534 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	GPBAR1	Q8TDU6	330 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	LGR6	Q9HBX8	967 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	DISC1	Q9NRI5	854 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	C1GALT1	Q9NS00	363 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	CCDC39	Q9UFE4	941 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	PCOLCE2	Q9UKZ9	415 aa		4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	DNMT1	P26358	1616 aa	Known RBP	4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	EIF2AK4	Q9P2K8	1649 aa	Known RBP	4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	ZC3H13	Q5T200	1668 aa	Known RBP	4.35	□□□□□ -1.71
MUC1-215	ENST00000466913	PRPF40A	O75400	957 aa	Known RBP	4.34	□□□□□ -1.71
MUC1-215	ENST00000466913	FAM87A	P0C7U9	286 aa		4.34	□□□□□ -1.71
MUC1-215	ENST00000466913	LMNB1	P20700	586 aa		4.34	□□□□□ -1.71
MUC1-215	ENST00000466913	EIF4B	P23588	611 aa	Known RBP	4.34	□□□□□ -1.71
MUC1-215	ENST00000466913	GNA15	P30679	374 aa		4.34	□□□□□ -1.71
MUC1-215	ENST00000466913	ZNF252P-AS1	Q0IIN9	211 aa		4.34	□□□□□ -1.71
MUC1-215	ENST00000466913	CDK5R2	Q13319	367 aa		4.34	□□□□□ -1.71
MUC1-215	ENST00000466913	COL19A1	Q14993	1142 aa		4.34	□□□□□ -1.71
MUC1-215	ENST00000466913	ZC3H12A	Q5D1E8	599 aa	Known RBP	4.34	□□□□□ -1.71
MUC1-215	ENST00000466913	AEBP1	Q8IUX7	1158 aa		4.34	□□□□□ -1.71
MUC1-215	ENST00000466913	TP53INP2	Q8IXH6	220 aa		4.34	□□□□□ -1.71
MUC1-215	ENST00000466913	STK11IP	Q8N1F8	1099 aa		4.34	□□□□□ -1.71
MUC1-215	ENST00000466913	RNF214	Q8ND24	703 aa		4.34	□□□□□ -1.71
MUC1-215	ENST00000466913	SETDB2	Q96T68	719 aa		4.34	□□□□□ -1.71
MUC1-215	ENST00000466913	OSBPL7	Q9BZF2	842 aa		4.34	□□□□□ -1.71
MUC1-215	ENST00000466913	WWC3	Q9ULE0	1092 aa		4.34	□□□□□ -1.71
MUC1-215	ENST00000466913	SHANK2	Q9UPX8	1470 aa		4.34	□□□□□ -1.71
MUC1-215	ENST00000466913	CAMSAP1	Q5T5Y3	1602 aa		4.34	□□□□□ -1.71
MUC1-215	ENST00000466913	POLR1A	O95602	1720 aa	Predicted RBP	4.33	□□□□□ -1.72
MUC1-215	ENST00000466913	ABCC3	O15438	1527 aa		4.33	□□□□□ -1.72
MUC1-215	ENST00000466913	PRDM15	P57071	1507 aa	Predicted RBP	4.33	□□□□□ -1.72
MUC1-215	ENST00000466913	FAM135A	Q9P2D6	1515 aa		4.33	□□□□□ -1.72
MUC1-215	ENST00000466913	RTEL1-TNFRSF6B	F6WH68	1400 aa		4.33	□□□□□ -1.72
MUC1-215	ENST00000466913	NPAT	Q14207	1427 aa		4.33	□□□□□ -1.72
MUC1-215	ENST00000466913	PTPRK	Q15262	1439 aa		4.33	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms