RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 ASNSP08243 561 aa17.34■□□□□ 0.37
SQSTM1-205ENST00000464493 MFAP1P55081 439 aaKnown RBP17.34■□□□□ 0.37
SQSTM1-205ENST00000464493 JAG1P78504 1218 aa17.34■□□□□ 0.37
SQSTM1-205ENST00000464493 SNAPC2Q13487 334 aa17.34■□□□□ 0.37
SQSTM1-205ENST00000464493 VPS53Q5VIR6 699 aa17.34■□□□□ 0.37
SQSTM1-205ENST00000464493 CCDC171Q6TFL3 1326 aa17.34■□□□□ 0.37
SQSTM1-205ENST00000464493 ZNF589Q86UQ0 364 aaPredicted RBP17.34■□□□□ 0.37
SQSTM1-205ENST00000464493 ATAD5Q96QE3 1844 aa17.34■□□□□ 0.37
SQSTM1-205ENST00000464493 NAPBQ9H115 298 aa17.34■□□□□ 0.37
SQSTM1-205ENST00000464493 RNF186Q9NXI6 227 aa17.34■□□□□ 0.37
SQSTM1-205ENST00000464493 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.34■□□□□ 0.37
SQSTM1-205ENST00000464493 KCNH4Q9UQ05 1017 aa17.34■□□□□ 0.37
SQSTM1-205ENST00000464493 AFG3L2Q9Y4W6 797 aa17.34■□□□□ 0.37
SQSTM1-205ENST00000464493 LAMB1P07942 1786 aa17.33■□□□□ 0.37
SQSTM1-205ENST00000464493 CCL15-CCL14A0A0B4J2E2 113 aa17.33■□□□□ 0.36
SQSTM1-205ENST00000464493 USP17L5A8MUK1 530 aa17.33■□□□□ 0.36
SQSTM1-205ENST00000464493 CXCL11O14625 94 aa17.33■□□□□ 0.36
SQSTM1-205ENST00000464493 CETPP11597 493 aa17.33■□□□□ 0.36
SQSTM1-205ENST00000464493 CDK8P49336 464 aa17.33■□□□□ 0.36
SQSTM1-205ENST00000464493 CCL15Q16663 113 aa17.33■□□□□ 0.36
SQSTM1-205ENST00000464493 C16orf86Q6ZW13 317 aa17.33■□□□□ 0.36
SQSTM1-205ENST00000464493 SLC44A5Q8NCS7 719 aa17.33■□□□□ 0.36
SQSTM1-205ENST00000464493 FOXN1O15353 648 aa17.32■□□□□ 0.36
SQSTM1-205ENST00000464493 FOXP2O15409 715 aa17.32■□□□□ 0.36
SQSTM1-205ENST00000464493 TRPA1O75762 1119 aa17.32■□□□□ 0.36
SQSTM1-205ENST00000464493 GH2P01242 217 aa17.32■□□□□ 0.36
SQSTM1-205ENST00000464493 HSPD1P10809 573 aaKnown RBP17.32■□□□□ 0.36
SQSTM1-205ENST00000464493 ALX1Q15699 326 aa17.32■□□□□ 0.36
SQSTM1-205ENST00000464493 ABCB5Q2M3G0 1257 aa17.32■□□□□ 0.36
SQSTM1-205ENST00000464493 SHROOM1Q2M3G4 852 aaPredicted RBP17.32■□□□□ 0.36
SQSTM1-205ENST00000464493 OTUD7BQ6GQQ9 843 aa17.32■□□□□ 0.36
SQSTM1-205ENST00000464493 CCDC84Q86UT8 332 aaPredicted RBP17.32■□□□□ 0.36
SQSTM1-205ENST00000464493 IFNL1Q8IU54 200 aa17.32■□□□□ 0.36
SQSTM1-205ENST00000464493 BRI3BPQ8WY22 251 aa17.32■□□□□ 0.36
SQSTM1-205ENST00000464493 PTPN18Q99952 460 aa17.32■□□□□ 0.36
SQSTM1-205ENST00000464493 TBC1D2Q9BYX2 928 aa17.32■□□□□ 0.36
SQSTM1-205ENST00000464493 CABP5Q9NP86 173 aa17.32■□□□□ 0.36
SQSTM1-205ENST00000464493 SAGE1Q9NXZ1 904 aa17.32■□□□□ 0.36
SQSTM1-205ENST00000464493 ZBTB21Q9ULJ3 1066 aa17.32■□□□□ 0.36
SQSTM1-205ENST00000464493 PHIPQ8WWQ0 1821 aa17.31■□□□□ 0.36
SQSTM1-205ENST00000464493 TRIM75PA6NK02 468 aa17.31■□□□□ 0.36
SQSTM1-205ENST00000464493 IGF2BP3O00425 579 aaKnown RBP eCLIP17.31■□□□□ 0.36
SQSTM1-205ENST00000464493 ALDH1A1P00352 501 aa17.31■□□□□ 0.36
SQSTM1-205ENST00000464493 CHMLP26374 656 aa17.31■□□□□ 0.36
SQSTM1-205ENST00000464493 BMP2KLQ5H9B9 411 aa17.31■□□□□ 0.36
SQSTM1-205ENST00000464493 ZNF280CQ8ND82 737 aa17.31■□□□□ 0.36
SQSTM1-205ENST00000464493 RUFY2Q8WXA3 655 aa17.31■□□□□ 0.36
SQSTM1-205ENST00000464493 AS3MTQ9HBK9 375 aa17.31■□□□□ 0.36
SQSTM1-205ENST00000464493 MYH8P13535 1937 aa17.3■□□□□ 0.36
SQSTM1-205ENST00000464493 MPHOSPH10O00566 681 aaKnown RBP17.3■□□□□ 0.36
SQSTM1-205ENST00000464493 FGAP02671 866 aa17.3■□□□□ 0.36
SQSTM1-205ENST00000464493 CTCFP49711 727 aaPredicted RBP17.3■□□□□ 0.36
SQSTM1-205ENST00000464493 SPP2Q13103 211 aa17.3■□□□□ 0.36
SQSTM1-205ENST00000464493 RAB3GAP1Q15042 981 aa17.3■□□□□ 0.36
SQSTM1-205ENST00000464493 STK11IPQ8N1F8 1099 aa17.3■□□□□ 0.36
SQSTM1-205ENST00000464493 CCDC17Q96LX7 622 aa17.3■□□□□ 0.36
SQSTM1-205ENST00000464493 WDR18Q9BV38 432 aa17.3■□□□□ 0.36
SQSTM1-205ENST00000464493 MKNK2Q9HBH9 465 aa17.3■□□□□ 0.36
SQSTM1-205ENST00000464493 ROBO3Q96MS0 1386 aa17.29■□□□□ 0.36
SQSTM1-205ENST00000464493 A0A0G2JLL6 359 aaPredicted RBP17.29■□□□□ 0.36
SQSTM1-205ENST00000464493 SLC3A2P08195 630 aaKnown RBP17.29■□□□□ 0.36
SQSTM1-205ENST00000464493 PPARAQ07869 468 aa17.29■□□□□ 0.36
SQSTM1-205ENST00000464493 FASTKD5Q7L8L6 764 aaKnown RBP17.29■□□□□ 0.36
SQSTM1-205ENST00000464493 PRRT2Q7Z6L0 340 aaPredicted RBP17.29■□□□□ 0.36
SQSTM1-205ENST00000464493 ZNF287Q9HBT7 754 aa17.29■□□□□ 0.36
SQSTM1-205ENST00000464493 TSKSQ9UJT2 592 aa17.29■□□□□ 0.36
SQSTM1-205ENST00000464493 BTBD19C9JJ37 291 aa17.28■□□□□ 0.36
SQSTM1-205ENST00000464493 AKR1B1P15121 316 aa17.28■□□□□ 0.36
SQSTM1-205ENST00000464493 MOGSQ13724 837 aa17.28■□□□□ 0.36
SQSTM1-205ENST00000464493 FAM43AQ8N2R8 423 aa17.28■□□□□ 0.36
SQSTM1-205ENST00000464493 IL25Q9H293 177 aa17.28■□□□□ 0.36
SQSTM1-205ENST00000464493 ZMYM6O95789 1325 aa17.27■□□□□ 0.36
SQSTM1-205ENST00000464493 RAD50Q92878 1312 aa17.27■□□□□ 0.36
SQSTM1-205ENST00000464493 USP17L10C9JJH3 530 aa17.27■□□□□ 0.36
SQSTM1-205ENST00000464493 TBC1D8O95759 1140 aa17.27■□□□□ 0.36
SQSTM1-205ENST00000464493 HSPA8P11142 646 aaKnown RBP17.27■□□□□ 0.36
SQSTM1-205ENST00000464493 GUCY1A2P33402 732 aa17.27■□□□□ 0.36
SQSTM1-205ENST00000464493 BACE1P56817 501 aa17.27■□□□□ 0.36
SQSTM1-205ENST00000464493 PDE4BQ07343 736 aa17.27■□□□□ 0.36
SQSTM1-205ENST00000464493 SEPT2Q15019 361 aa17.27■□□□□ 0.36
SQSTM1-205ENST00000464493 TMEM179Q6ZVK1 233 aa17.27■□□□□ 0.36
SQSTM1-205ENST00000464493 ZCCHC17Q9NP64 241 aaKnown RBP17.27■□□□□ 0.36
SQSTM1-205ENST00000464493 ANAPC4Q9UJX5 808 aa17.27■□□□□ 0.36
SQSTM1-205ENST00000464493 PTPRFP10586 1907 aa17.26■□□□□ 0.35
SQSTM1-205ENST00000464493 C19orf81C9J6K1 198 aa17.26■□□□□ 0.35
SQSTM1-205ENST00000464493 RASA1P20936 1047 aa17.26■□□□□ 0.35
SQSTM1-205ENST00000464493 LBX1P52954 281 aa17.26■□□□□ 0.35
SQSTM1-205ENST00000464493 CTDSPL2Q05D32 466 aa17.26■□□□□ 0.35
SQSTM1-205ENST00000464493 SH3D19Q5HYK7 790 aa17.26■□□□□ 0.35
SQSTM1-205ENST00000464493 GADL1Q6ZQY3 521 aa17.26■□□□□ 0.35
SQSTM1-205ENST00000464493 ANKRD23Q86SG2 305 aa17.26■□□□□ 0.35
SQSTM1-205ENST00000464493 ZNF444Q8N0Y2 327 aaPredicted RBP17.26■□□□□ 0.35
SQSTM1-205ENST00000464493 DSCC1Q9BVC3 393 aa17.26■□□□□ 0.35
SQSTM1-205ENST00000464493 CFHR5Q9BXR6 569 aa17.26■□□□□ 0.35
SQSTM1-205ENST00000464493 PDHXO00330 501 aa17.25■□□□□ 0.35
SQSTM1-205ENST00000464493 SGSM2O43147 1006 aa17.25■□□□□ 0.35
SQSTM1-205ENST00000464493 PRDM1O75626 825 aa17.25■□□□□ 0.35
SQSTM1-205ENST00000464493 HMGCS2P54868 508 aa17.25■□□□□ 0.35
SQSTM1-205ENST00000464493 MTMR2Q13614 643 aa17.25■□□□□ 0.35
SQSTM1-205ENST00000464493 GPAT2Q6NUI2 795 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms