RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 SLC34A2O95436 690 aa21.48■■□□□ 1.03
COL1A2-202ENST00000461525 FLT3LGP49771 235 aa21.48■■□□□ 1.03
COL1A2-202ENST00000461525 UBXN2AP68543 259 aa21.48■■□□□ 1.03
COL1A2-202ENST00000461525 SHROOM1Q2M3G4 852 aaPredicted RBP21.48■■□□□ 1.03
COL1A2-202ENST00000461525 SLC9C2Q5TAH2 1124 aa21.48■■□□□ 1.03
COL1A2-202ENST00000461525 PTPRFP10586 1907 aa21.47■■□□□ 1.03
COL1A2-202ENST00000461525 MAGEB6P1A0A0J9YX57 407 aa21.47■■□□□ 1.03
COL1A2-202ENST00000461525 PDE6AP16499 860 aa21.47■■□□□ 1.03
COL1A2-202ENST00000461525 IRX3P78415 501 aaPredicted RBP21.47■■□□□ 1.03
COL1A2-202ENST00000461525 PDE3AQ14432 1141 aa21.47■■□□□ 1.03
COL1A2-202ENST00000461525 TTC6Q86TZ1 520 aa21.47■■□□□ 1.03
COL1A2-202ENST00000461525 COA7Q96BR5 231 aa21.47■■□□□ 1.03
COL1A2-202ENST00000461525 RIOK1Q9BRS2 568 aaKnown RBP21.47■■□□□ 1.03
COL1A2-202ENST00000461525 EHD4Q9H223 541 aa21.47■■□□□ 1.03
COL1A2-202ENST00000461525 SERPINB13Q9UIV8 391 aa21.47■■□□□ 1.03
COL1A2-202ENST00000461525 SIPA1L1O43166 1804 aa21.47■■□□□ 1.03
COL1A2-202ENST00000461525 CENPFP49454 3210 aa21.46■■□□□ 1.03
COL1A2-202ENST00000461525 C19orf81C9J6K1 198 aa21.46■■□□□ 1.03
COL1A2-202ENST00000461525 USP17L10C9JJH3 530 aa21.46■■□□□ 1.03
COL1A2-202ENST00000461525 ADCY3O60266 1144 aa21.46■■□□□ 1.03
COL1A2-202ENST00000461525 GH2P01242 217 aa21.46■■□□□ 1.03
COL1A2-202ENST00000461525 CCL5P13501 91 aa21.46■■□□□ 1.03
COL1A2-202ENST00000461525 C20orf194Q5TEA3 1177 aa21.46■■□□□ 1.03
COL1A2-202ENST00000461525 NKX2-3Q8TAU0 364 aa21.46■■□□□ 1.03
COL1A2-202ENST00000461525 IRF5Q13568 498 aa21.45■■□□□ 1.02
COL1A2-202ENST00000461525 CRNKL1Q9BZJ0 848 aaKnown RBP21.45■■□□□ 1.02
COL1A2-202ENST00000461525 RNF208Q9H0X6 261 aa21.45■■□□□ 1.02
COL1A2-202ENST00000461525 ZNF532Q9HCE3 1301 aa21.45■■□□□ 1.02
COL1A2-202ENST00000461525 LOC285556D6RIA3 1793 aa21.44■■□□□ 1.02
COL1A2-202ENST00000461525 GJB1P08034 283 aa21.44■■□□□ 1.02
COL1A2-202ENST00000461525 HOXA7P31268 230 aaPredicted RBP21.44■■□□□ 1.02
COL1A2-202ENST00000461525 TATDN1Q6P1N9 297 aa21.44■■□□□ 1.02
COL1A2-202ENST00000461525 PXYLP1Q8TE99 480 aa21.44■■□□□ 1.02
COL1A2-202ENST00000461525 SHISA4Q96DD7 197 aa21.44■■□□□ 1.02
COL1A2-202ENST00000461525 EDC3Q96F86 508 aaKnown RBP21.44■■□□□ 1.02
COL1A2-202ENST00000461525 TAOK2Q9UL54 1235 aa21.44■■□□□ 1.02
COL1A2-202ENST00000461525 MYO5AQ9Y4I1 1855 aaKnown RBP21.43■■□□□ 1.02
COL1A2-202ENST00000461525 POLR3DP05423 398 aaPredicted RBP21.43■■□□□ 1.02
COL1A2-202ENST00000461525 ELNP15502 786 aa21.43■■□□□ 1.02
COL1A2-202ENST00000461525 BOLA2Q9H3K6 86 aa21.43■■□□□ 1.02
COL1A2-202ENST00000461525 PAG1Q9NWQ8 432 aa21.43■■□□□ 1.02
COL1A2-202ENST00000461525 MORF4L1Q9UBU8 362 aa21.43■■□□□ 1.02
COL1A2-202ENST00000461525 INHAP05111 366 aa21.42■■□□□ 1.02
COL1A2-202ENST00000461525 ATP5JP18859 108 aa21.42■■□□□ 1.02
COL1A2-202ENST00000461525 GJA8P48165 433 aa21.42■■□□□ 1.02
COL1A2-202ENST00000461525 CERKLQ49MI3 558 aaPredicted RBP21.42■■□□□ 1.02
COL1A2-202ENST00000461525 FOCADQ5VW36 1801 aa21.42■■□□□ 1.02
COL1A2-202ENST00000461525 ATAD5Q96QE3 1844 aa21.42■■□□□ 1.02
COL1A2-202ENST00000461525 P2RX7Q99572 595 aaKnown RBP21.42■■□□□ 1.02
COL1A2-202ENST00000461525 FEZ1Q99689 392 aa21.42■■□□□ 1.02
COL1A2-202ENST00000461525 LRRCC1Q9C099 1032 aa21.42■■□□□ 1.02
COL1A2-202ENST00000461525 MCM9Q9NXL9 1143 aa21.42■■□□□ 1.02
COL1A2-202ENST00000461525 TCRBV5S4A2TA0A5A2 114 aa21.41■■□□□ 1.02
COL1A2-202ENST00000461525 PLCD1P51178 756 aa21.41■■□□□ 1.02
COL1A2-202ENST00000461525 HERVK_113P62684 666 aa21.41■■□□□ 1.02
COL1A2-202ENST00000461525 RAB3GAP1Q15042 981 aa21.41■■□□□ 1.02
COL1A2-202ENST00000461525 ABCB5Q2M3G0 1257 aa21.41■■□□□ 1.02
COL1A2-202ENST00000461525 USP17L2Q6R6M4 530 aa21.41■■□□□ 1.02
COL1A2-202ENST00000461525 GCC1Q96CN9 775 aa21.41■■□□□ 1.02
COL1A2-202ENST00000461525 UNC93B1Q9H1C4 597 aa21.41■■□□□ 1.02
COL1A2-202ENST00000461525 CABP5Q9NP86 173 aa21.41■■□□□ 1.02
COL1A2-202ENST00000461525 EMILIN3Q9NT22 766 aa21.41■■□□□ 1.02
COL1A2-202ENST00000461525 BRCA2P51587 3418 aa21.41■■□□□ 1.02
COL1A2-202ENST00000461525 SHMT1P34896 483 aa21.4■■□□□ 1.02
COL1A2-202ENST00000461525 LCORLQ8N3X6 602 aa21.4■■□□□ 1.02
COL1A2-202ENST00000461525 HAUS7Q99871 368 aa21.4■■□□□ 1.02
COL1A2-202ENST00000461525 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.4■■□□□ 1.02
COL1A2-202ENST00000461525 CDK5RAP2Q96SN8 1893 aa21.4■■□□□ 1.02
COL1A2-202ENST00000461525 ADD2P35612 726 aa21.39■■□□□ 1.01
COL1A2-202ENST00000461525 ZYXQ15942 572 aaKnown RBP21.39■■□□□ 1.01
COL1A2-202ENST00000461525 U2AF1L4Q8WU68 220 aaKnown RBP21.39■■□□□ 1.01
COL1A2-202ENST00000461525 GTF3C2Q8WUA4 911 aaPredicted RBP21.39■■□□□ 1.01
COL1A2-202ENST00000461525 SDR42E1Q8WUS8 393 aa21.39■■□□□ 1.01
COL1A2-202ENST00000461525 C12orf42Q96LP6 360 aa21.39■■□□□ 1.01
COL1A2-202ENST00000461525 USP14P54578 494 aa21.38■■□□□ 1.01
COL1A2-202ENST00000461525 GABPAQ06546 454 aa21.38■■□□□ 1.01
COL1A2-202ENST00000461525 GPRC5AQ8NFJ5 357 aa21.38■■□□□ 1.01
COL1A2-202ENST00000461525 ARMT1Q9H993 441 aa21.38■■□□□ 1.01
COL1A2-202ENST00000461525 TXNRD2Q9NNW7 524 aa21.38■■□□□ 1.01
COL1A2-202ENST00000461525 DCP1AQ9NPI6 582 aaPredicted RBP21.38■■□□□ 1.01
COL1A2-202ENST00000461525 MKI67P46013 3256 aaKnown RBP21.38■■□□□ 1.01
COL1A2-202ENST00000461525 SMARCA5O60264 1052 aaPredicted RBP21.37■■□□□ 1.01
COL1A2-202ENST00000461525 MBD4O95243 580 aa21.37■■□□□ 1.01
COL1A2-202ENST00000461525 KIAA1683Q9H0B3 1180 aa21.37■■□□□ 1.01
COL1A2-202ENST00000461525 GJD2Q9UKL4 321 aa21.37■■□□□ 1.01
COL1A2-202ENST00000461525 PEX10O60683 326 aa21.36■■□□□ 1.01
COL1A2-202ENST00000461525 ACER1Q8TDN7 264 aa21.36■■□□□ 1.01
COL1A2-202ENST00000461525 PAGR1Q9BTK6 254 aa21.36■■□□□ 1.01
COL1A2-202ENST00000461525 RBPJLQ9UBG7 517 aa21.36■■□□□ 1.01
COL1A2-202ENST00000461525 MGAMO43451 1857 aa21.36■■□□□ 1.01
COL1A2-202ENST00000461525 USP17L15C9J2P7 530 aa21.35■■□□□ 1.01
COL1A2-202ENST00000461525 USP17L13C9JLJ4 530 aa21.35■■□□□ 1.01
COL1A2-202ENST00000461525 USP17L11C9JVI0 530 aa21.35■■□□□ 1.01
COL1A2-202ENST00000461525 USP17L18D6R9N7 530 aa21.35■■□□□ 1.01
COL1A2-202ENST00000461525 USP17L22D6RA61 530 aa21.35■■□□□ 1.01
COL1A2-202ENST00000461525 USP17L17D6RBQ6 530 aa21.35■■□□□ 1.01
COL1A2-202ENST00000461525 USP17L19D6RCP7 530 aa21.35■■□□□ 1.01
COL1A2-202ENST00000461525 USP17L20D6RJB6 530 aa21.35■■□□□ 1.01
COL1A2-202ENST00000461525 MPHOSPH10O00566 681 aaKnown RBP21.35■■□□□ 1.01
COL1A2-202ENST00000461525 SGPL1O95470 568 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms