RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 PSMC4P43686 418 aa22.9■■□□□ 1.26
COL5A1-203ENST00000460264 TTC6Q86TZ1 520 aa22.9■■□□□ 1.26
COL5A1-203ENST00000460264 LCORLQ8N3X6 602 aa22.9■■□□□ 1.26
COL5A1-203ENST00000460264 ECHDC1Q9NTX5 307 aa22.9■■□□□ 1.26
COL5A1-203ENST00000460264 MYH8P13535 1937 aa22.89■■□□□ 1.25
COL5A1-203ENST00000460264 MTMR2Q13614 643 aa22.89■■□□□ 1.25
COL5A1-203ENST00000460264 SLFNL1Q499Z3 407 aa22.89■■□□□ 1.25
COL5A1-203ENST00000460264 SH3D19Q5HYK7 790 aa22.89■■□□□ 1.25
COL5A1-203ENST00000460264 TATDN1Q6P1N9 297 aa22.89■■□□□ 1.25
COL5A1-203ENST00000460264 SMCR8Q8TEV9 937 aaPredicted RBP22.89■■□□□ 1.25
COL5A1-203ENST00000460264 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.89■■□□□ 1.25
COL5A1-203ENST00000460264 PNMA3Q9UL41 463 aa22.89■■□□□ 1.25
COL5A1-203ENST00000460264 KIAA0100Q14667 2235 aaKnown RBP22.89■■□□□ 1.25
COL5A1-203ENST00000460264 PRMT2P55345 433 aa22.88■■□□□ 1.25
COL5A1-203ENST00000460264 SLC9C1Q4G0N8 1177 aa22.88■■□□□ 1.25
COL5A1-203ENST00000460264 PLCD1P51178 756 aa22.87■■□□□ 1.25
COL5A1-203ENST00000460264 BACE1P56817 501 aa22.87■■□□□ 1.25
COL5A1-203ENST00000460264 SDR42E1Q8WUS8 393 aa22.87■■□□□ 1.25
COL5A1-203ENST00000460264 GPATCH3Q96I76 525 aa22.87■■□□□ 1.25
COL5A1-203ENST00000460264 ZNF333Q96JL9 665 aa22.87■■□□□ 1.25
COL5A1-203ENST00000460264 ARMT1Q9H993 441 aa22.87■■□□□ 1.25
COL5A1-203ENST00000460264 PDE4DIPQ5VU43 2346 aa22.87■■□□□ 1.25
COL5A1-203ENST00000460264 MBD4O95243 580 aa22.86■■□□□ 1.25
COL5A1-203ENST00000460264 FMNL1O95466 1100 aaPredicted RBP22.86■■□□□ 1.25
COL5A1-203ENST00000460264 GH2P01242 217 aa22.86■■□□□ 1.25
COL5A1-203ENST00000460264 CHGBP05060 677 aa22.86■■□□□ 1.25
COL5A1-203ENST00000460264 OSBPP22059 807 aa22.86■■□□□ 1.25
COL5A1-203ENST00000460264 PABPC4Q13310 644 aaKnown RBP eCLIP22.86■■□□□ 1.25
COL5A1-203ENST00000460264 CRBNQ96SW2 442 aa22.86■■□□□ 1.25
COL5A1-203ENST00000460264 DCP1AQ9NPI6 582 aaPredicted RBP22.86■■□□□ 1.25
COL5A1-203ENST00000460264 MCM9Q9NXL9 1143 aa22.86■■□□□ 1.25
COL5A1-203ENST00000460264 SRRDQ9UH36 339 aa22.86■■□□□ 1.25
COL5A1-203ENST00000460264 POLR3DP05423 398 aaPredicted RBP22.85■■□□□ 1.25
COL5A1-203ENST00000460264 SHMT1P34896 483 aa22.85■■□□□ 1.25
COL5A1-203ENST00000460264 FCGRTP55899 365 aa22.85■■□□□ 1.25
COL5A1-203ENST00000460264 UBE3CQ15386 1083 aa22.85■■□□□ 1.25
COL5A1-203ENST00000460264 TSHZ3Q63HK5 1081 aa22.85■■□□□ 1.25
COL5A1-203ENST00000460264 POTEFA5A3E0 1075 aa22.84■■□□□ 1.25
COL5A1-203ENST00000460264 C19orf81C9J6K1 198 aa22.84■■□□□ 1.25
COL5A1-203ENST00000460264 USP17L10C9JJH3 530 aa22.84■■□□□ 1.25
COL5A1-203ENST00000460264 HOXD10P28358 340 aa22.84■■□□□ 1.25
COL5A1-203ENST00000460264 EVX2Q03828 476 aa22.84■■□□□ 1.25
COL5A1-203ENST00000460264 GABPAQ06546 454 aa22.84■■□□□ 1.25
COL5A1-203ENST00000460264 NBPF11Q86T75 865 aa22.84■■□□□ 1.25
COL5A1-203ENST00000460264 ANKRD13CQ8N6S4 541 aa22.84■■□□□ 1.25
COL5A1-203ENST00000460264 ASCC2Q9H1I8 757 aaPredicted RBP22.84■■□□□ 1.25
COL5A1-203ENST00000460264 TMOD4Q9NZQ9 345 aa22.84■■□□□ 1.25
COL5A1-203ENST00000460264 MYPNQ86TC9 1320 aa22.83■■□□□ 1.25
COL5A1-203ENST00000460264 CERKLQ49MI3 558 aaPredicted RBP22.83■■□□□ 1.25
COL5A1-203ENST00000460264 ZSCAN25Q6NSZ9 544 aa22.83■■□□□ 1.25
COL5A1-203ENST00000460264 SH3TC2Q8TF17 1288 aa22.83■■□□□ 1.25
COL5A1-203ENST00000460264 DOCK3Q8IZD9 2030 aa22.82■■□□□ 1.24
COL5A1-203ENST00000460264 PRKAB2O43741 272 aa22.82■■□□□ 1.24
COL5A1-203ENST00000460264 CYP2D6P10635 497 aa22.82■■□□□ 1.24
COL5A1-203ENST00000460264 GCLCP48506 637 aaPredicted RBP22.82■■□□□ 1.24
COL5A1-203ENST00000460264 FAM110CQ1W6H9 321 aa22.82■■□□□ 1.24
COL5A1-203ENST00000460264 ABCB5Q2M3G0 1257 aa22.82■■□□□ 1.24
COL5A1-203ENST00000460264 PRKCZQ05513 592 aa22.81■■□□□ 1.24
COL5A1-203ENST00000460264 KBTBD3Q8NAB2 608 aa22.81■■□□□ 1.24
COL5A1-203ENST00000460264 RAET1EQ8TD07 263 aa22.81■■□□□ 1.24
COL5A1-203ENST00000460264 ATP8A2Q9NTI2 1148 aa22.81■■□□□ 1.24
COL5A1-203ENST00000460264 HOXA7P31268 230 aaPredicted RBP22.8■■□□□ 1.24
COL5A1-203ENST00000460264 IRX3P78415 501 aaPredicted RBP22.8■■□□□ 1.24
COL5A1-203ENST00000460264 RAB3GAP1Q15042 981 aa22.8■■□□□ 1.24
COL5A1-203ENST00000460264 PUS7LQ9H0K6 701 aaKnown RBP22.8■■□□□ 1.24
COL5A1-203ENST00000460264 EMILIN3Q9NT22 766 aa22.8■■□□□ 1.24
COL5A1-203ENST00000460264 BRCA2P51587 3418 aa22.8■■□□□ 1.24
COL5A1-203ENST00000460264 TTC41PQ6P2S7 1318 aa22.8■■□□□ 1.24
COL5A1-203ENST00000460264 TNPO2O14787 897 aaKnown RBP22.79■■□□□ 1.24
COL5A1-203ENST00000460264 USP17L2Q6R6M4 530 aa22.79■■□□□ 1.24
COL5A1-203ENST00000460264 SLC44A5Q8NCS7 719 aa22.79■■□□□ 1.24
COL5A1-203ENST00000460264 OTUD7AQ8TE49 926 aaPredicted RBP22.79■■□□□ 1.24
COL5A1-203ENST00000460264 FEZ1Q99689 392 aa22.79■■□□□ 1.24
COL5A1-203ENST00000460264 CABP5Q9NP86 173 aa22.79■■□□□ 1.24
COL5A1-203ENST00000460264 TAOK2Q9UL54 1235 aa22.79■■□□□ 1.24
COL5A1-203ENST00000460264 GABRQQ9UN88 632 aa22.79■■□□□ 1.24
COL5A1-203ENST00000460264 MYCP01106 439 aaPredicted RBP22.78■■□□□ 1.24
COL5A1-203ENST00000460264 GRK4P32298 578 aa22.78■■□□□ 1.24
COL5A1-203ENST00000460264 GUCY1A2P33402 732 aa22.78■■□□□ 1.24
COL5A1-203ENST00000460264 C12orf42Q96LP6 360 aa22.78■■□□□ 1.24
COL5A1-203ENST00000460264 TMEM106CQ9BVX2 250 aa22.78■■□□□ 1.24
COL5A1-203ENST00000460264 ZYXQ15942 572 aaKnown RBP22.77■■□□□ 1.24
COL5A1-203ENST00000460264 PI4K2BQ8TCG2 481 aa22.77■■□□□ 1.24
COL5A1-203ENST00000460264 ACER1Q8TDN7 264 aa22.77■■□□□ 1.24
COL5A1-203ENST00000460264 DYNLL2Q96FJ2 89 aa22.77■■□□□ 1.24
COL5A1-203ENST00000460264 KIAA1683Q9H0B3 1180 aa22.77■■□□□ 1.24
COL5A1-203ENST00000460264 SWAP70Q9UH65 585 aa22.77■■□□□ 1.24
COL5A1-203ENST00000460264 SLC4A4Q9Y6R1 1079 aa22.77■■□□□ 1.24
COL5A1-203ENST00000460264 PLXNB2O15031 1838 aa22.76■■□□□ 1.23
COL5A1-203ENST00000460264 CYP2D7A0A087X1C5 515 aa22.76■■□□□ 1.23
COL5A1-203ENST00000460264 EN2P19622 333 aaPredicted RBP22.76■■□□□ 1.23
COL5A1-203ENST00000460264 FLT3LGP49771 235 aa22.76■■□□□ 1.23
COL5A1-203ENST00000460264 HERVK_113P62684 666 aa22.76■■□□□ 1.23
COL5A1-203ENST00000460264 HDAC1Q13547 482 aaPredicted RBP22.76■■□□□ 1.23
COL5A1-203ENST00000460264 SEPT2Q15019 361 aa22.76■■□□□ 1.23
COL5A1-203ENST00000460264 C12orf60Q5U649 245 aa22.76■■□□□ 1.23
COL5A1-203ENST00000460264 APPBP2Q92624 585 aa22.76■■□□□ 1.23
COL5A1-203ENST00000460264 DDRGK1Q96HY6 314 aa22.76■■□□□ 1.23
COL5A1-203ENST00000460264 P2RX7Q99572 595 aaKnown RBP22.76■■□□□ 1.23
COL5A1-203ENST00000460264 MORF4L1Q9UBU8 362 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms