RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 NEDD9Q14511 834 aa10.96□□□□□ -0.65
UFD1-205ENST00000459854 TNIP1Q15025 636 aa10.96□□□□□ -0.65
UFD1-205ENST00000459854 ZNF569Q5MCW4 686 aa10.96□□□□□ -0.65
UFD1-205ENST00000459854 AIDAQ96BJ3 306 aa10.96□□□□□ -0.65
UFD1-205ENST00000459854 IQCDQ96DY2 449 aa10.96□□□□□ -0.65
UFD1-205ENST00000459854 RAB3IPQ96QF0 476 aaPredicted RBP10.96□□□□□ -0.65
UFD1-205ENST00000459854 SELENOSQ9BQE4 189 aa10.96□□□□□ -0.65
UFD1-205ENST00000459854 BCAP29Q9UHQ4 241 aa10.96□□□□□ -0.65
UFD1-205ENST00000459854 GLI3P10071 1580 aa10.96□□□□□ -0.65
UFD1-205ENST00000459854 BICDL2A1A5D9 508 aa10.96□□□□□ -0.65
UFD1-205ENST00000459854 FYB2Q5VWT5 728 aa10.96□□□□□ -0.65
UFD1-205ENST00000459854 CABS1Q96KC9 395 aa10.96□□□□□ -0.65
UFD1-205ENST00000459854 TACO1Q9BSH4 297 aaKnown RBP10.96□□□□□ -0.65
UFD1-205ENST00000459854 BCL2L12Q9HB09 334 aa10.96□□□□□ -0.65
UFD1-205ENST00000459854 VEZTQ9HBM0 779 aa10.96□□□□□ -0.65
UFD1-205ENST00000459854 SEC63Q9UGP8 760 aaKnown RBP10.96□□□□□ -0.65
UFD1-205ENST00000459854 HDAC9Q9UKV0 1011 aa10.96□□□□□ -0.65
UFD1-205ENST00000459854 GOLGA8KD6RF30 607 aa10.96□□□□□ -0.66
UFD1-205ENST00000459854 IARSP41252 1262 aaKnown RBP10.96□□□□□ -0.66
UFD1-205ENST00000459854 CEP85LQ5SZL2 805 aa10.96□□□□□ -0.66
UFD1-205ENST00000459854 BEND3Q5T5X7 828 aa10.96□□□□□ -0.66
UFD1-205ENST00000459854 PAXIP1Q6ZW49 1069 aaPredicted RBP10.96□□□□□ -0.66
UFD1-205ENST00000459854 TAOK1Q7L7X3 1001 aa10.96□□□□□ -0.66
UFD1-205ENST00000459854 NLRP10Q86W26 655 aa10.96□□□□□ -0.66
UFD1-205ENST00000459854 TRIM47Q96LD4 638 aa10.96□□□□□ -0.66
UFD1-205ENST00000459854 TMX1Q9H3N1 280 aa10.96□□□□□ -0.66
UFD1-205ENST00000459854 GOLGA8BA8MQT2 603 aa10.96□□□□□ -0.66
UFD1-205ENST00000459854 BIN1O00499 593 aa10.96□□□□□ -0.66
UFD1-205ENST00000459854 BRD2P25440 801 aaKnown RBP10.96□□□□□ -0.66
UFD1-205ENST00000459854 ERCC6LQ2NKX8 1250 aa10.96□□□□□ -0.66
UFD1-205ENST00000459854 BRAPQ7Z569 592 aa10.96□□□□□ -0.66
UFD1-205ENST00000459854 RNF10Q8N5U6 811 aaKnown RBP10.96□□□□□ -0.66
UFD1-205ENST00000459854 CNKSR1Q969H4 720 aa10.96□□□□□ -0.66
UFD1-205ENST00000459854 RBSNQ9H1K0 784 aa10.96□□□□□ -0.66
UFD1-205ENST00000459854 EXOC6BQ9Y2D4 811 aa10.96□□□□□ -0.66
UFD1-205ENST00000459854 GOLGA8AA7E2F4 631 aa10.95□□□□□ -0.66
UFD1-205ENST00000459854 AKR1B15C9JRZ8 316 aaPredicted RBP10.95□□□□□ -0.66
UFD1-205ENST00000459854 ARHGAP6O43182 974 aa10.95□□□□□ -0.66
UFD1-205ENST00000459854 IGHDP01880 384 aa10.95□□□□□ -0.66
UFD1-205ENST00000459854 ATP2A2P16615 1042 aaKnown RBP10.95□□□□□ -0.66
UFD1-205ENST00000459854 CCDC42Q96M95 316 aa10.95□□□□□ -0.66
UFD1-205ENST00000459854 USP42Q9H9J4 1324 aaKnown RBP10.95□□□□□ -0.66
UFD1-205ENST00000459854 CCDC194A0A1B0GVG4 234 aa10.95□□□□□ -0.66
UFD1-205ENST00000459854 PTF1AQ7RTS3 328 aa10.95□□□□□ -0.66
UFD1-205ENST00000459854 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.95□□□□□ -0.66
UFD1-205ENST00000459854 GOLGA6BA6NDN3 693 aa10.95□□□□□ -0.66
UFD1-205ENST00000459854 ZNF213O14771 459 aa10.95□□□□□ -0.66
UFD1-205ENST00000459854 MYL5Q02045 173 aa10.95□□□□□ -0.66
UFD1-205ENST00000459854 C2CD5Q86YS7 1000 aa10.95□□□□□ -0.66
UFD1-205ENST00000459854 GBP5Q96PP8 586 aa10.95□□□□□ -0.66
UFD1-205ENST00000459854 CAMKK2Q96RR4 588 aa10.95□□□□□ -0.66
UFD1-205ENST00000459854 ANKRD2Q9GZV1 360 aa10.95□□□□□ -0.66
UFD1-205ENST00000459854 MTFR1LQ9H019 292 aa10.95□□□□□ -0.66
UFD1-205ENST00000459854 ORC3Q9UBD5 711 aaPredicted RBP10.95□□□□□ -0.66
UFD1-205ENST00000459854 FAN1Q9Y2M0 1017 aa10.95□□□□□ -0.66
UFD1-205ENST00000459854 PRPF4BQ13523 1007 aaKnown RBP10.95□□□□□ -0.66
UFD1-205ENST00000459854 CAVIN4Q5BKX8 364 aa10.95□□□□□ -0.66
UFD1-205ENST00000459854 THEGQ9P2T0 379 aa10.95□□□□□ -0.66
UFD1-205ENST00000459854 ABCC4O15439 1325 aa10.95□□□□□ -0.66
UFD1-205ENST00000459854 C6orf229H3BNL8 230 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 KIF1CO43896 1103 aaKnown RBP10.94□□□□□ -0.66
UFD1-205ENST00000459854 FAM71BQ8TC56 605 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 ESYT1Q9BSJ8 1104 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 ZNF219Q9P2Y4 722 aaPredicted RBP10.94□□□□□ -0.66
UFD1-205ENST00000459854 RGPD1P0DJD0 1748 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 CAMTA2O94983 1202 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 ERCC3P19447 782 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 ZNF75DP51815 510 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 TRIM28Q13263 835 aaKnown RBP10.94□□□□□ -0.66
UFD1-205ENST00000459854 TRPC3Q13507 836 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 SLMAPQ14BN4 828 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 GRIPAP1Q4V328 841 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 MAP3K21Q5TCX8 1036 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 PHLDB3Q6NSJ2 640 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 IQCA1Q86XH1 822 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 TMTC2Q8N394 836 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 SEC62Q99442 399 aaKnown RBP10.94□□□□□ -0.66
UFD1-205ENST00000459854 EXOC1Q9NV70 894 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 SLC5A1P13866 664 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 HLFQ16534 295 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 USP37Q86T82 979 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 RAB11FIP4Q86YS3 637 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 EFCAB8A8MWE9 144 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 WDHD1O75717 1129 aaPredicted RBP10.94□□□□□ -0.66
UFD1-205ENST00000459854 PAK2Q13177 524 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 ELF2Q15723 593 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 COL23A1Q86Y22 540 aaPredicted RBP10.94□□□□□ -0.66
UFD1-205ENST00000459854 PAF1Q8N7H5 531 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 MTUS1Q9ULD2 1270 aa10.94□□□□□ -0.66
UFD1-205ENST00000459854 ACTN4O43707 911 aaKnown RBP10.93□□□□□ -0.66
UFD1-205ENST00000459854 IGSF3O75054 1194 aa10.93□□□□□ -0.66
UFD1-205ENST00000459854 RHOXF2BP0C7M4 288 aa10.93□□□□□ -0.66
UFD1-205ENST00000459854 UBA7P41226 1012 aa10.93□□□□□ -0.66
UFD1-205ENST00000459854 FKBP4Q02790 459 aaKnown RBP eCLIP10.93□□□□□ -0.66
UFD1-205ENST00000459854 ZKSCAN8Q15776 578 aaPredicted RBP10.93□□□□□ -0.66
UFD1-205ENST00000459854 HSP90AA5PQ58FG0 334 aa10.93□□□□□ -0.66
UFD1-205ENST00000459854 TMC4Q7Z404 712 aa10.93□□□□□ -0.66
UFD1-205ENST00000459854 RHOXF2Q9BQY4 288 aa10.93□□□□□ -0.66
UFD1-205ENST00000459854 VCX3AQ9NNX9 186 aa10.93□□□□□ -0.66
UFD1-205ENST00000459854 A0A087WUV0 522 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms