RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 GUCY2CP25092 1073 aa6.62□□□□□ -1.35
HMGB1P16-201ENST00000447155 USP11P51784 963 aa6.62□□□□□ -1.35
HMGB1P16-201ENST00000447155 SERINC3Q13530 473 aa6.62□□□□□ -1.35
HMGB1P16-201ENST00000447155 CCDC144BQ3MJ40 725 aa6.62□□□□□ -1.35
HMGB1P16-201ENST00000447155 RUFY4Q6ZNE9 571 aa6.62□□□□□ -1.35
HMGB1P16-201ENST00000447155 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P16-201ENST00000447155 NLRC3Q7RTR2 1065 aa6.62□□□□□ -1.35
HMGB1P16-201ENST00000447155 SLFN12Q8IYM2 578 aa6.62□□□□□ -1.35
HMGB1P16-201ENST00000447155 FAM13CQ8NE31 585 aa6.62□□□□□ -1.35
HMGB1P16-201ENST00000447155 YIPF2Q9BWQ6 316 aa6.62□□□□□ -1.35
HMGB1P16-201ENST00000447155 FBRSQ9HAH7 460 aa6.62□□□□□ -1.35
HMGB1P16-201ENST00000447155 KLHL3Q9UH77 587 aa6.62□□□□□ -1.35
HMGB1P16-201ENST00000447155 PCOLCE2Q9UKZ9 415 aa6.62□□□□□ -1.35
HMGB1P16-201ENST00000447155 TTBK1Q5TCY1 1321 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P16-201ENST00000447155 LOC105371045A0A1W2PR82 267 aa6.61□□□□□ -1.35
HMGB1P16-201ENST00000447155 CHURC1-FNTBB4DL54 471 aa6.61□□□□□ -1.35
HMGB1P16-201ENST00000447155 TNFRSF10CO14798 259 aa6.61□□□□□ -1.35
HMGB1P16-201ENST00000447155 SLBPQ14493 270 aaKnown RBP eCLIP6.61□□□□□ -1.35
HMGB1P16-201ENST00000447155 ARSHQ5FYA8 562 aa6.61□□□□□ -1.35
HMGB1P16-201ENST00000447155 TXNRD3Q86VQ6 643 aa6.61□□□□□ -1.35
HMGB1P16-201ENST00000447155 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.61□□□□□ -1.35
HMGB1P16-201ENST00000447155 MKL1Q969V6 931 aa6.61□□□□□ -1.35
HMGB1P16-201ENST00000447155 UBL7Q96S82 380 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P16-201ENST00000447155 ACSS3Q9H6R3 686 aa6.61□□□□□ -1.35
HMGB1P16-201ENST00000447155 SSU72Q9NP77 194 aaKnown RBP6.61□□□□□ -1.35
HMGB1P16-201ENST00000447155 SLC12A7Q9Y666 1083 aa6.61□□□□□ -1.35
HMGB1P16-201ENST00000447155 A0A1W2PQH9 124 aa6.6□□□□□ -1.35
HMGB1P16-201ENST00000447155 UPK3BL1B0FP48 263 aa6.6□□□□□ -1.35
HMGB1P16-201ENST00000447155 UPK3BL2E5RIL1 263 aa6.6□□□□□ -1.35
HMGB1P16-201ENST00000447155 CST3P01034 146 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P16-201ENST00000447155 RAG1P15918 1043 aa6.6□□□□□ -1.35
HMGB1P16-201ENST00000447155 RAB6AP20340 208 aa6.6□□□□□ -1.35
HMGB1P16-201ENST00000447155 PPP2R5EQ16537 467 aa6.6□□□□□ -1.35
HMGB1P16-201ENST00000447155 NKG7Q16617 165 aa6.6□□□□□ -1.35
HMGB1P16-201ENST00000447155 UBE3DQ7Z6J8 389 aa6.6□□□□□ -1.35
HMGB1P16-201ENST00000447155 TTC6Q86TZ1 520 aa6.6□□□□□ -1.35
HMGB1P16-201ENST00000447155 DZIP1LQ8IYY4 767 aaKnown RBP6.6□□□□□ -1.35
HMGB1P16-201ENST00000447155 TNKS2Q9H2K2 1166 aa6.6□□□□□ -1.35
HMGB1P16-201ENST00000447155 ZSWIM4Q9H7M6 989 aa6.6□□□□□ -1.35
HMGB1P16-201ENST00000447155 ACRP10323 421 aa6.59□□□□□ -1.35
HMGB1P16-201ENST00000447155 CCNFP41002 786 aa6.59□□□□□ -1.35
HMGB1P16-201ENST00000447155 MAP7Q14244 749 aa6.59□□□□□ -1.35
HMGB1P16-201ENST00000447155 NFE2L2Q16236 605 aa6.59□□□□□ -1.35
HMGB1P16-201ENST00000447155 FXNQ16595 210 aa6.59□□□□□ -1.35
HMGB1P16-201ENST00000447155 CDPF1Q6NVV7 123 aa6.59□□□□□ -1.35
HMGB1P16-201ENST00000447155 NOP9Q86U38 636 aaKnown RBP6.59□□□□□ -1.35
HMGB1P16-201ENST00000447155 EZH1Q92800 747 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P16-201ENST00000447155 MEGF10Q96KG7 1140 aa6.59□□□□□ -1.35
HMGB1P16-201ENST00000447155 MYRFLQ96LU7 910 aa6.59□□□□□ -1.35
HMGB1P16-201ENST00000447155 FOXQ1Q9C009 403 aa6.59□□□□□ -1.35
HMGB1P16-201ENST00000447155 KRBA1A5PL33 1030 aa6.58□□□□□ -1.36
HMGB1P16-201ENST00000447155 K7ELQ4 463 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P16-201ENST00000447155 BMS1Q14692 1282 aaKnown RBP6.58□□□□□ -1.36
HMGB1P16-201ENST00000447155 SGO2Q562F6 1265 aa6.58□□□□□ -1.36
HMGB1P16-201ENST00000447155 PRAMEF13Q5VWM6 474 aa6.58□□□□□ -1.36
HMGB1P16-201ENST00000447155 UNC5AQ6ZN44 842 aa6.58□□□□□ -1.36
HMGB1P16-201ENST00000447155 LRP10Q7Z4F1 713 aa6.58□□□□□ -1.36
HMGB1P16-201ENST00000447155 PHACTR4Q8IZ21 702 aa6.58□□□□□ -1.36
HMGB1P16-201ENST00000447155 CYB5D2Q8WUJ1 264 aa6.58□□□□□ -1.36
HMGB1P16-201ENST00000447155 FBLIM1Q8WUP2 373 aa6.58□□□□□ -1.36
HMGB1P16-201ENST00000447155 UTP4Q969X6 686 aaKnown RBP6.58□□□□□ -1.36
HMGB1P16-201ENST00000447155 CCDC74BQ96LY2 380 aa6.58□□□□□ -1.36
HMGB1P16-201ENST00000447155 SLC9A7Q96T83 725 aa6.58□□□□□ -1.36
HMGB1P16-201ENST00000447155 DPH2Q9BQC3 489 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P16-201ENST00000447155 SEMA6CQ9H3T2 930 aa6.58□□□□□ -1.36
HMGB1P16-201ENST00000447155 DAGLAQ9Y4D2 1042 aa6.58□□□□□ -1.36
HMGB1P16-201ENST00000447155 RGS13O14921 159 aa6.57□□□□□ -1.36
HMGB1P16-201ENST00000447155 LRIG2O94898 1065 aa6.57□□□□□ -1.36
HMGB1P16-201ENST00000447155 NFICP08651 508 aa6.57□□□□□ -1.36
HMGB1P16-201ENST00000447155 BMP3P12645 472 aa6.57□□□□□ -1.36
HMGB1P16-201ENST00000447155 MAP4P27816 1152 aaKnown RBP6.57□□□□□ -1.36
HMGB1P16-201ENST00000447155 DDR2Q16832 855 aa6.57□□□□□ -1.36
HMGB1P16-201ENST00000447155 LARP1BQ659C4 914 aaKnown RBP6.57□□□□□ -1.36
HMGB1P16-201ENST00000447155 ARMCX6Q7L4S7 300 aa6.57□□□□□ -1.36
HMGB1P16-201ENST00000447155 ARMC10Q8N2F6 343 aa6.57□□□□□ -1.36
HMGB1P16-201ENST00000447155 CELF2-AS1Q8N7Q2 184 aa6.57□□□□□ -1.36
HMGB1P16-201ENST00000447155 MFSD2AQ8NA29 543 aa6.57□□□□□ -1.36
HMGB1P16-201ENST00000447155 DCAF5Q96JK2 942 aa6.57□□□□□ -1.36
HMGB1P16-201ENST00000447155 KIF2CQ99661 725 aa6.57□□□□□ -1.36
HMGB1P16-201ENST00000447155 PIF1Q9H611 641 aa6.57□□□□□ -1.36
HMGB1P16-201ENST00000447155 PHAXQ9H814 394 aaKnown RBP6.57□□□□□ -1.36
HMGB1P16-201ENST00000447155 STK17AQ9UEE5 414 aa6.57□□□□□ -1.36
HMGB1P16-201ENST00000447155 RXRBP28702 533 aa6.56□□□□□ -1.36
HMGB1P16-201ENST00000447155 GBP1P32455 592 aa6.56□□□□□ -1.36
HMGB1P16-201ENST00000447155 CHRNA4P43681 627 aa6.56□□□□□ -1.36
HMGB1P16-201ENST00000447155 ZYXQ15942 572 aaKnown RBP6.56□□□□□ -1.36
HMGB1P16-201ENST00000447155 FAM20CQ8IXL6 584 aa6.56□□□□□ -1.36
HMGB1P16-201ENST00000447155 MRFAP1L1Q96HT8 127 aa6.56□□□□□ -1.36
HMGB1P16-201ENST00000447155 SSBP4Q9BWG4 385 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P16-201ENST00000447155 CCDC113Q9H0I3 377 aa6.56□□□□□ -1.36
HMGB1P16-201ENST00000447155 CDK11AQ9UQ88 783 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P16-201ENST00000447155 MSRB2Q9Y3D2 182 aa6.56□□□□□ -1.36
HMGB1P16-201ENST00000447155 LTBP3Q9NS15 1303 aa6.55□□□□□ -1.36
HMGB1P16-201ENST00000447155 FAM95CA0A1B0GW59 222 aa6.55□□□□□ -1.36
HMGB1P16-201ENST00000447155 DHX15O43143 795 aaKnown RBP6.55□□□□□ -1.36
HMGB1P16-201ENST00000447155 UBOX5O94941 541 aa6.55□□□□□ -1.36
HMGB1P16-201ENST00000447155 POLR2BP30876 1174 aaKnown RBP6.55□□□□□ -1.36
HMGB1P16-201ENST00000447155 SEZ6L2Q6UXD5 910 aa6.55□□□□□ -1.36
HMGB1P16-201ENST00000447155 CD163Q86VB7 1156 aa6.55□□□□□ -1.36
HMGB1P16-201ENST00000447155 DHRS1Q96LJ7 313 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms