RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 MKI67P46013 3256 aaKnown RBP25.59■■□□□ 1.69
VSX1-206ENST00000444511 JAG1P78504 1218 aa25.59■■□□□ 1.69
VSX1-206ENST00000444511 RNF208Q9H0X6 261 aa25.59■■□□□ 1.69
VSX1-206ENST00000444511 ASCC2Q9H1I8 757 aaPredicted RBP25.59■■□□□ 1.69
VSX1-206ENST00000444511 ZBTB40Q9NUA8 1239 aa25.59■■□□□ 1.69
VSX1-206ENST00000444511 ZBTB21Q9ULJ3 1066 aa25.59■■□□□ 1.69
VSX1-206ENST00000444511 LOC285556D6RIA3 1793 aa25.59■■□□□ 1.69
VSX1-206ENST00000444511 TTF1Q15361 905 aaPredicted RBP25.58■■□□□ 1.69
VSX1-206ENST00000444511 BCL11AQ9H165 835 aa25.58■■□□□ 1.69
VSX1-206ENST00000444511 CHMP4BQ9H444 224 aaKnown RBP25.58■■□□□ 1.69
VSX1-206ENST00000444511 RCAN3Q9UKA8 241 aa25.58■■□□□ 1.69
VSX1-206ENST00000444511 FOCADQ5VW36 1801 aa25.58■■□□□ 1.68
VSX1-206ENST00000444511 GJB1P08034 283 aa25.57■■□□□ 1.68
VSX1-206ENST00000444511 IFIT2P09913 472 aaKnown RBP25.57■■□□□ 1.68
VSX1-206ENST00000444511 IRX3P78415 501 aaPredicted RBP25.57■■□□□ 1.68
VSX1-206ENST00000444511 IRF5Q13568 498 aa25.57■■□□□ 1.68
VSX1-206ENST00000444511 SHROOM1Q2M3G4 852 aaPredicted RBP25.57■■□□□ 1.68
VSX1-206ENST00000444511 SHISA4Q96DD7 197 aa25.57■■□□□ 1.68
VSX1-206ENST00000444511 TAOK2Q9UL54 1235 aa25.57■■□□□ 1.68
VSX1-206ENST00000444511 MGAMO43451 1857 aa25.57■■□□□ 1.68
VSX1-206ENST00000444511 CDK5RAP2Q96SN8 1893 aa25.57■■□□□ 1.68
VSX1-206ENST00000444511 C19orf81C9J6K1 198 aa25.56■■□□□ 1.68
VSX1-206ENST00000444511 USP17L10C9JJH3 530 aa25.56■■□□□ 1.68
VSX1-206ENST00000444511 ELNP15502 786 aa25.56■■□□□ 1.68
VSX1-206ENST00000444511 PXYLP1Q8TE99 480 aa25.56■■□□□ 1.68
VSX1-206ENST00000444511 GJA8P48165 433 aa25.55■■□□□ 1.68
VSX1-206ENST00000444511 TTC6Q86TZ1 520 aa25.55■■□□□ 1.68
VSX1-206ENST00000444511 SIRT2Q8IXJ6 389 aa25.55■■□□□ 1.68
VSX1-206ENST00000444511 SERPINB13Q9UIV8 391 aa25.55■■□□□ 1.68
VSX1-206ENST00000444511 RAB11FIP3O75154 756 aa25.54■■□□□ 1.68
VSX1-206ENST00000444511 INHAP05111 366 aa25.54■■□□□ 1.68
VSX1-206ENST00000444511 SLC9C2Q5TAH2 1124 aa25.54■■□□□ 1.68
VSX1-206ENST00000444511 DNAJC2Q99543 621 aaKnown RBP25.54■■□□□ 1.68
VSX1-206ENST00000444511 UNC93B1Q9H1C4 597 aa25.54■■□□□ 1.68
VSX1-206ENST00000444511 EHD4Q9H223 541 aa25.54■■□□□ 1.68
VSX1-206ENST00000444511 MAGEB6P1A0A0J9YX57 407 aa25.53■■□□□ 1.68
VSX1-206ENST00000444511 GOLIM4O00461 696 aa25.53■■□□□ 1.68
VSX1-206ENST00000444511 GH2P01242 217 aa25.53■■□□□ 1.68
VSX1-206ENST00000444511 HOXA7P31268 230 aaPredicted RBP25.53■■□□□ 1.68
VSX1-206ENST00000444511 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.53■■□□□ 1.68
VSX1-206ENST00000444511 RIOK1Q9BRS2 568 aaKnown RBP25.53■■□□□ 1.68
VSX1-206ENST00000444511 PDE6AP16499 860 aa25.52■■□□□ 1.68
VSX1-206ENST00000444511 TATDN1Q6P1N9 297 aa25.52■■□□□ 1.68
VSX1-206ENST00000444511 U2AF1L4Q8WU68 220 aaKnown RBP25.52■■□□□ 1.68
VSX1-206ENST00000444511 MORF4L1Q9UBU8 362 aa25.52■■□□□ 1.68
VSX1-206ENST00000444511 P2RX7Q99572 595 aaKnown RBP25.51■■□□□ 1.67
VSX1-206ENST00000444511 CRNKL1Q9BZJ0 848 aaKnown RBP25.51■■□□□ 1.67
VSX1-206ENST00000444511 HERVK_113P62684 666 aa25.5■■□□□ 1.67
VSX1-206ENST00000444511 CERKLQ49MI3 558 aaPredicted RBP25.5■■□□□ 1.67
VSX1-206ENST00000444511 USP17L2Q6R6M4 530 aa25.5■■□□□ 1.67
VSX1-206ENST00000444511 FEZ1Q99689 392 aa25.5■■□□□ 1.67
VSX1-206ENST00000444511 ZNF532Q9HCE3 1301 aa25.5■■□□□ 1.67
VSX1-206ENST00000444511 SGPL1O95470 568 aa25.49■■□□□ 1.67
VSX1-206ENST00000444511 POLR3DP05423 398 aaPredicted RBP25.49■■□□□ 1.67
VSX1-206ENST00000444511 RAB3GAP1Q15042 981 aa25.49■■□□□ 1.67
VSX1-206ENST00000444511 EMILIN3Q9NT22 766 aa25.49■■□□□ 1.67
VSX1-206ENST00000444511 MYH1P12882 1939 aa25.49■■□□□ 1.67
VSX1-206ENST00000444511 PLCD1P51178 756 aa25.48■■□□□ 1.67
VSX1-206ENST00000444511 ABCB5Q2M3G0 1257 aa25.48■■□□□ 1.67
VSX1-206ENST00000444511 HABP4Q5JVS0 413 aaKnown RBP25.48■■□□□ 1.67
VSX1-206ENST00000444511 GPRC5AQ8NFJ5 357 aa25.48■■□□□ 1.67
VSX1-206ENST00000444511 CABP5Q9NP86 173 aa25.48■■□□□ 1.67
VSX1-206ENST00000444511 PDE3AQ14432 1141 aa25.47■■□□□ 1.67
VSX1-206ENST00000444511 ZYXQ15942 572 aaKnown RBP25.47■■□□□ 1.67
VSX1-206ENST00000444511 DPF3Q92784 378 aa25.47■■□□□ 1.67
VSX1-206ENST00000444511 EDC3Q96F86 508 aaKnown RBP25.47■■□□□ 1.67
VSX1-206ENST00000444511 BOLA2Q9H3K6 86 aa25.47■■□□□ 1.67
VSX1-206ENST00000444511 PAG1Q9NWQ8 432 aa25.47■■□□□ 1.67
VSX1-206ENST00000444511 MCM9Q9NXL9 1143 aa25.47■■□□□ 1.67
VSX1-206ENST00000444511 TCRBV5S4A2TA0A5A2 114 aa25.46■■□□□ 1.67
VSX1-206ENST00000444511 FARP2O94887 1054 aaPredicted RBP25.46■■□□□ 1.67
VSX1-206ENST00000444511 C20orf194Q5TEA3 1177 aa25.46■■□□□ 1.67
VSX1-206ENST00000444511 UBE2Q1Q7Z7E8 422 aa25.46■■□□□ 1.67
VSX1-206ENST00000444511 GTF3C2Q8WUA4 911 aaPredicted RBP25.46■■□□□ 1.67
VSX1-206ENST00000444511 DEFB118Q96PH6 123 aa25.46■■□□□ 1.67
VSX1-206ENST00000444511 HTATIP2Q9BUP3 242 aa25.46■■□□□ 1.67
VSX1-206ENST00000444511 TXNRD2Q9NNW7 524 aa25.46■■□□□ 1.67
VSX1-206ENST00000444511 GJD2Q9UKL4 321 aa25.46■■□□□ 1.67
VSX1-206ENST00000444511 H0YGN5 161 aa25.45■■□□□ 1.66
VSX1-206ENST00000444511 PEX10O60683 326 aa25.45■■□□□ 1.66
VSX1-206ENST00000444511 TFRCP02786 760 aaKnown RBP25.45■■□□□ 1.66
VSX1-206ENST00000444511 HMGCRP04035 888 aa25.45■■□□□ 1.66
VSX1-206ENST00000444511 ATP5JP18859 108 aa25.45■■□□□ 1.66
VSX1-206ENST00000444511 SHMT1P34896 483 aa25.45■■□□□ 1.66
VSX1-206ENST00000444511 USP14P54578 494 aa25.45■■□□□ 1.66
VSX1-206ENST00000444511 CCAR1Q8IX12 1150 aaKnown RBP25.45■■□□□ 1.66
VSX1-206ENST00000444511 LCORLQ8N3X6 602 aa25.45■■□□□ 1.66
VSX1-206ENST00000444511 C12orf42Q96LP6 360 aa25.45■■□□□ 1.66
VSX1-206ENST00000444511 PAGR1Q9BTK6 254 aa25.45■■□□□ 1.66
VSX1-206ENST00000444511 PAK6Q9NQU5 681 aaPredicted RBP25.45■■□□□ 1.66
VSX1-206ENST00000444511 RBPJLQ9UBG7 517 aa25.45■■□□□ 1.66
VSX1-206ENST00000444511 CAPN2P17655 700 aa25.44■■□□□ 1.66
VSX1-206ENST00000444511 SDR42E1Q8WUS8 393 aa25.44■■□□□ 1.66
VSX1-206ENST00000444511 KIAA1683Q9H0B3 1180 aa25.44■■□□□ 1.66
VSX1-206ENST00000444511 USP17L15C9J2P7 530 aa25.43■■□□□ 1.66
VSX1-206ENST00000444511 USP17L13C9JLJ4 530 aa25.43■■□□□ 1.66
VSX1-206ENST00000444511 USP17L11C9JVI0 530 aa25.43■■□□□ 1.66
VSX1-206ENST00000444511 USP17L18D6R9N7 530 aa25.43■■□□□ 1.66
VSX1-206ENST00000444511 USP17L22D6RA61 530 aa25.43■■□□□ 1.66
VSX1-206ENST00000444511 USP17L17D6RBQ6 530 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms