RNA–Protein interactions for RNA: ENST00000444396.5

NR1H3-212, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-212ENST00000444396 RRP1BQ14684 758 aaKnown RBP22.37■■□□□ 1.17
NR1H3-212ENST00000444396 CERKLQ49MI3 558 aaPredicted RBP22.37■■□□□ 1.17
NR1H3-212ENST00000444396 ELP3Q9H9T3 547 aa22.37■■□□□ 1.17
NR1H3-212ENST00000444396 PTPRAP18433 802 aa22.36■■□□□ 1.17
NR1H3-212ENST00000444396 OPTNQ96CV9 577 aa22.36■■□□□ 1.17
NR1H3-212ENST00000444396 DYNLL2Q96FJ2 89 aa22.36■■□□□ 1.17
NR1H3-212ENST00000444396 LAMA4Q16363 1823 aa22.36■■□□□ 1.17
NR1H3-212ENST00000444396 ATAD5Q96QE3 1844 aa22.36■■□□□ 1.17
NR1H3-212ENST00000444396 PDE4BQ07343 736 aa22.35■■□□□ 1.17
NR1H3-212ENST00000444396 PAXIP1Q6ZW49 1069 aaPredicted RBP22.35■■□□□ 1.17
NR1H3-212ENST00000444396 MAP4K1Q92918 833 aa22.35■■□□□ 1.17
NR1H3-212ENST00000444396 ZBTB21Q9ULJ3 1066 aa22.35■■□□□ 1.17
NR1H3-212ENST00000444396 KCNH4Q9UQ05 1017 aa22.35■■□□□ 1.17
NR1H3-212ENST00000444396 GJA5P36382 358 aa22.34■■□□□ 1.17
NR1H3-212ENST00000444396 INHBEP58166 350 aa22.34■■□□□ 1.17
NR1H3-212ENST00000444396 JMYQ8N9B5 988 aa22.34■■□□□ 1.17
NR1H3-212ENST00000444396 SLC44A5Q8NCS7 719 aa22.34■■□□□ 1.17
NR1H3-212ENST00000444396 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.34■■□□□ 1.17
NR1H3-212ENST00000444396 U3KPZ7 1027 aaPredicted RBP22.34■■□□□ 1.17
NR1H3-212ENST00000444396 MANSC4A6NHS7 340 aaPredicted RBP22.33■■□□□ 1.17
NR1H3-212ENST00000444396 USP17L5A8MUK1 530 aa22.33■■□□□ 1.17
NR1H3-212ENST00000444396 SMIM22K7EJ46 135 aa22.33■■□□□ 1.17
NR1H3-212ENST00000444396 CXCL11O14625 94 aa22.33■■□□□ 1.17
NR1H3-212ENST00000444396 EPB41L2O43491 1005 aaKnown RBP22.33■■□□□ 1.17
NR1H3-212ENST00000444396 ORC4O43929 436 aa22.33■■□□□ 1.17
NR1H3-212ENST00000444396 ABCB5Q2M3G0 1257 aa22.33■■□□□ 1.17
NR1H3-212ENST00000444396 KIAA1211Q6ZU35 1233 aa22.33■■□□□ 1.17
NR1H3-212ENST00000444396 TMEM179Q6ZVK1 233 aa22.33■■□□□ 1.17
NR1H3-212ENST00000444396 WDR18Q9BV38 432 aa22.33■■□□□ 1.17
NR1H3-212ENST00000444396 AS3MTQ9HBK9 375 aa22.33■■□□□ 1.17
NR1H3-212ENST00000444396 CABP5Q9NP86 173 aa22.33■■□□□ 1.17
NR1H3-212ENST00000444396 MYH8P13535 1937 aa22.33■■□□□ 1.16
NR1H3-212ENST00000444396 PHIPQ8WWQ0 1821 aa22.32■■□□□ 1.16
NR1H3-212ENST00000444396 TESPA1A2RU30 521 aaPredicted RBP22.32■■□□□ 1.16
NR1H3-212ENST00000444396 ZNF213O14771 459 aa22.32■■□□□ 1.16
NR1H3-212ENST00000444396 RASA1P20936 1047 aa22.32■■□□□ 1.16
NR1H3-212ENST00000444396 IMMTQ16891 758 aaKnown RBP22.32■■□□□ 1.16
NR1H3-212ENST00000444396 STAG1Q8WVM7 1258 aa22.32■■□□□ 1.16
NR1H3-212ENST00000444396 OTUD5Q96G74 571 aa22.32■■□□□ 1.16
NR1H3-212ENST00000444396 LSG1Q9H089 658 aaKnown RBP22.32■■□□□ 1.16
NR1H3-212ENST00000444396 RNF41Q9H4P4 317 aaPredicted RBP22.32■■□□□ 1.16
NR1H3-212ENST00000444396 MKNK2Q9HBH9 465 aa22.32■■□□□ 1.16
NR1H3-212ENST00000444396 AFG3L2Q9Y4W6 797 aa22.32■■□□□ 1.16
NR1H3-212ENST00000444396 PLIN4Q96Q06 1357 aa22.32■■□□□ 1.16
NR1H3-212ENST00000444396 GREB1LQ9C091 1923 aaPredicted RBP22.31■■□□□ 1.16
NR1H3-212ENST00000444396 IRF6O14896 467 aa22.31■■□□□ 1.16
NR1H3-212ENST00000444396 GDF11O95390 407 aa22.31■■□□□ 1.16
NR1H3-212ENST00000444396 GH2P01242 217 aa22.31■■□□□ 1.16
NR1H3-212ENST00000444396 GTF2A2P52657 109 aa22.31■■□□□ 1.16
NR1H3-212ENST00000444396 JAG1P78504 1218 aa22.31■■□□□ 1.16
NR1H3-212ENST00000444396 PTH1RQ03431 593 aa22.31■■□□□ 1.16
NR1H3-212ENST00000444396 SREBF2Q12772 1141 aa22.31■■□□□ 1.16
NR1H3-212ENST00000444396 ZHX2Q9Y6X8 837 aa22.31■■□□□ 1.16
NR1H3-212ENST00000444396 TM4SF4P48230 202 aa22.3■■□□□ 1.16
NR1H3-212ENST00000444396 KIF23Q02241 960 aaPredicted RBP22.3■■□□□ 1.16
NR1H3-212ENST00000444396 SNAPC2Q13487 334 aa22.3■■□□□ 1.16
NR1H3-212ENST00000444396 ZNF280CQ8ND82 737 aa22.3■■□□□ 1.16
NR1H3-212ENST00000444396 CNKSR2Q8WXI2 1034 aa22.3■■□□□ 1.16
NR1H3-212ENST00000444396 MS4A4AQ96JQ5 239 aa22.3■■□□□ 1.16
NR1H3-212ENST00000444396 EIF5BO60841 1220 aaKnown RBP22.29■■□□□ 1.16
NR1H3-212ENST00000444396 GUCY1A2P33402 732 aa22.29■■□□□ 1.16
NR1H3-212ENST00000444396 AKNAD1Q5T1N1 836 aa22.29■■□□□ 1.16
NR1H3-212ENST00000444396 ZNF444Q8N0Y2 327 aaPredicted RBP22.29■■□□□ 1.16
NR1H3-212ENST00000444396 NBPF3Q9H094 633 aa22.29■■□□□ 1.16
NR1H3-212ENST00000444396 AOC2O75106 756 aa22.28■■□□□ 1.16
NR1H3-212ENST00000444396 CETPP11597 493 aa22.28■■□□□ 1.16
NR1H3-212ENST00000444396 AKR1B1P15121 316 aa22.28■■□□□ 1.16
NR1H3-212ENST00000444396 MAP2K1Q02750 393 aaPredicted RBP22.28■■□□□ 1.16
NR1H3-212ENST00000444396 CTDSPL2Q05D32 466 aa22.28■■□□□ 1.16
NR1H3-212ENST00000444396 SH3D19Q5HYK7 790 aa22.28■■□□□ 1.16
NR1H3-212ENST00000444396 ZCCHC17Q9NP64 241 aaKnown RBP22.28■■□□□ 1.16
NR1H3-212ENST00000444396 ANO2Q9NQ90 1003 aa22.28■■□□□ 1.16
NR1H3-212ENST00000444396 A0A0G2JLL6 359 aaPredicted RBP22.27■■□□□ 1.16
NR1H3-212ENST00000444396 REC8O95072 547 aa22.27■■□□□ 1.16
NR1H3-212ENST00000444396 GRM1Q13255 1194 aa22.27■■□□□ 1.16
NR1H3-212ENST00000444396 PPP4R3BQ5MIZ7 849 aa22.27■■□□□ 1.16
NR1H3-212ENST00000444396 MFSD6Q6ZSS7 791 aa22.27■■□□□ 1.16
NR1H3-212ENST00000444396 PRRT2Q7Z6L0 340 aaPredicted RBP22.27■■□□□ 1.16
NR1H3-212ENST00000444396 NEDD1Q8NHV4 660 aa22.27■■□□□ 1.16
NR1H3-212ENST00000444396 KANSL2Q9H9L4 492 aa22.27■■□□□ 1.16
NR1H3-212ENST00000444396 SYNPO2Q9UMS6 1093 aa22.27■■□□□ 1.16
NR1H3-212ENST00000444396 RBM8AQ9Y5S9 174 aaKnown RBP22.27■■□□□ 1.16
NR1H3-212ENST00000444396 IGKV6D-41A0A0C4DH26 115 aa22.26■■□□□ 1.15
NR1H3-212ENST00000444396 C19orf81C9J6K1 198 aa22.26■■□□□ 1.15
NR1H3-212ENST00000444396 HAND2P61296 217 aa22.26■■□□□ 1.15
NR1H3-212ENST00000444396 SEPT2Q15019 361 aa22.26■■□□□ 1.15
NR1H3-212ENST00000444396 SHROOM1Q2M3G4 852 aaPredicted RBP22.26■■□□□ 1.15
NR1H3-212ENST00000444396 TBC1D10CQ8IV04 446 aa22.26■■□□□ 1.15
NR1H3-212ENST00000444396 ZIC5Q96T25 663 aa22.26■■□□□ 1.15
NR1H3-212ENST00000444396 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.26■■□□□ 1.15
NR1H3-212ENST00000444396 TACC3Q9Y6A5 838 aa22.26■■□□□ 1.15
NR1H3-212ENST00000444396 PTPRFP10586 1907 aa22.25■■□□□ 1.15
NR1H3-212ENST00000444396 USP17L10C9JJH3 530 aa22.25■■□□□ 1.15
NR1H3-212ENST00000444396 MPHOSPH10O00566 681 aaKnown RBP22.25■■□□□ 1.15
NR1H3-212ENST00000444396 CYP21A2P08686 494 aa22.25■■□□□ 1.15
NR1H3-212ENST00000444396 BACE1P56817 501 aa22.25■■□□□ 1.15
NR1H3-212ENST00000444396 SPP2Q13103 211 aa22.25■■□□□ 1.15
NR1H3-212ENST00000444396 RAB3GAP1Q15042 981 aa22.25■■□□□ 1.15
NR1H3-212ENST00000444396 NECTIN1Q15223 517 aa22.25■■□□□ 1.15
NR1H3-212ENST00000444396 FASTKD5Q7L8L6 764 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms