RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 SNRKQ9NRH2 765 aa16.85■□□□□ 0.29
PTPRE-203ENST00000442830 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.85■□□□□ 0.29
PTPRE-203ENST00000442830 TAOK2Q9UL54 1235 aa16.85■□□□□ 0.29
PTPRE-203ENST00000442830 MS4A1P11836 297 aa16.84■□□□□ 0.29
PTPRE-203ENST00000442830 MTMR2Q13614 643 aa16.84■□□□□ 0.29
PTPRE-203ENST00000442830 CCDC84Q86UT8 332 aaPredicted RBP16.84■□□□□ 0.29
PTPRE-203ENST00000442830 MAPKAPK5Q8IW41 473 aa16.84■□□□□ 0.29
PTPRE-203ENST00000442830 DEFB118Q96PH6 123 aa16.84■□□□□ 0.29
PTPRE-203ENST00000442830 CRISPLD2Q9H0B8 497 aa16.84■□□□□ 0.29
PTPRE-203ENST00000442830 TNNQ9UQP3 1299 aa16.84■□□□□ 0.29
PTPRE-203ENST00000442830 EVI5O60447 810 aa16.83■□□□□ 0.28
PTPRE-203ENST00000442830 SLURP2P0DP57 97 aa16.83■□□□□ 0.28
PTPRE-203ENST00000442830 MAPK4P31152 587 aa16.83■□□□□ 0.28
PTPRE-203ENST00000442830 ZAP70P43403 619 aa16.83■□□□□ 0.28
PTPRE-203ENST00000442830 MAP3K12Q12852 859 aa16.83■□□□□ 0.28
PTPRE-203ENST00000442830 PDE3AQ14432 1141 aa16.83■□□□□ 0.28
PTPRE-203ENST00000442830 CHRDL2Q6WN34 429 aa16.83■□□□□ 0.28
PTPRE-203ENST00000442830 NECAB2Q7Z6G3 386 aa16.83■□□□□ 0.28
PTPRE-203ENST00000442830 RPTORQ8N122 1335 aa16.83■□□□□ 0.28
PTPRE-203ENST00000442830 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.83■□□□□ 0.28
PTPRE-203ENST00000442830 HMX1Q9NP08 348 aaPredicted RBP16.83■□□□□ 0.28
PTPRE-203ENST00000442830 ZBTB7BO15156 539 aaPredicted RBP16.82■□□□□ 0.28
PTPRE-203ENST00000442830 XRCC5P13010 732 aaKnown RBP16.82■□□□□ 0.28
PTPRE-203ENST00000442830 CYP7A1P22680 504 aa16.82■□□□□ 0.28
PTPRE-203ENST00000442830 TTF1Q15361 905 aaPredicted RBP16.82■□□□□ 0.28
PTPRE-203ENST00000442830 USP17L2Q6R6M4 530 aa16.82■□□□□ 0.28
PTPRE-203ENST00000442830 TTC6Q86TZ1 520 aa16.82■□□□□ 0.28
PTPRE-203ENST00000442830 CCAR1Q8IX12 1150 aaKnown RBP16.82■□□□□ 0.28
PTPRE-203ENST00000442830 GPRC5AQ8NFJ5 357 aa16.82■□□□□ 0.28
PTPRE-203ENST00000442830 NUDT12Q9BQG2 462 aa16.82■□□□□ 0.28
PTPRE-203ENST00000442830 EHD4Q9H223 541 aa16.82■□□□□ 0.28
PTPRE-203ENST00000442830 DBNLQ9UJU6 430 aaKnown RBP16.82■□□□□ 0.28
PTPRE-203ENST00000442830 ZBTB21Q9ULJ3 1066 aa16.82■□□□□ 0.28
PTPRE-203ENST00000442830 PLXNB2O15031 1838 aa16.82■□□□□ 0.28
PTPRE-203ENST00000442830 IDH1O75874 414 aaKnown RBP16.81■□□□□ 0.28
PTPRE-203ENST00000442830 USP5P45974 858 aa16.81■□□□□ 0.28
PTPRE-203ENST00000442830 USP14P54578 494 aa16.81■□□□□ 0.28
PTPRE-203ENST00000442830 HERVK_113P62684 666 aa16.81■□□□□ 0.28
PTPRE-203ENST00000442830 HNRNPUQ00839 825 aaKnown RBP eCLIP16.81■□□□□ 0.28
PTPRE-203ENST00000442830 DNAJC18Q9H819 358 aa16.81■□□□□ 0.28
PTPRE-203ENST00000442830 GJD2Q9UKL4 321 aa16.81■□□□□ 0.28
PTPRE-203ENST00000442830 PALD1Q9ULE6 856 aa16.81■□□□□ 0.28
PTPRE-203ENST00000442830 GLRX3O76003 335 aaKnown RBP16.8■□□□□ 0.28
PTPRE-203ENST00000442830 CCNA1P78396 465 aa16.8■□□□□ 0.28
PTPRE-203ENST00000442830 RRP1BQ14684 758 aaKnown RBP16.8■□□□□ 0.28
PTPRE-203ENST00000442830 ADGRA1Q86SQ6 560 aa16.8■□□□□ 0.28
PTPRE-203ENST00000442830 PIH1D3Q9NQM4 214 aaKnown RBP16.8■□□□□ 0.28
PTPRE-203ENST00000442830 SERPINB13Q9UIV8 391 aa16.8■□□□□ 0.28
PTPRE-203ENST00000442830 TATDN1Q6P1N9 297 aa16.79■□□□□ 0.28
PTPRE-203ENST00000442830 CEP85Q6P2H3 762 aa16.79■□□□□ 0.28
PTPRE-203ENST00000442830 C12orf42Q96LP6 360 aa16.79■□□□□ 0.28
PTPRE-203ENST00000442830 CHMP4BQ9H444 224 aaKnown RBP16.79■□□□□ 0.28
PTPRE-203ENST00000442830 C1orf115Q9H7X2 142 aa16.79■□□□□ 0.28
PTPRE-203ENST00000442830 RBM27Q9P2N5 1060 aaKnown RBP16.79■□□□□ 0.28
PTPRE-203ENST00000442830 NAV1Q8NEY1 1877 aa16.79■□□□□ 0.28
PTPRE-203ENST00000442830 RANBP2P49792 3224 aaKnown RBP16.79■□□□□ 0.28
PTPRE-203ENST00000442830 GDF11O95390 407 aa16.78■□□□□ 0.28
PTPRE-203ENST00000442830 RGS2P41220 211 aa16.78■□□□□ 0.28
PTPRE-203ENST00000442830 ERVK-9P63128 1117 aa16.78■□□□□ 0.28
PTPRE-203ENST00000442830 ERVK-24P63145 666 aa16.78■□□□□ 0.28
PTPRE-203ENST00000442830 MAGEB6Q8N7X4 407 aa16.78■□□□□ 0.28
PTPRE-203ENST00000442830 EAF2Q96CJ1 260 aaPredicted RBP16.78■□□□□ 0.28
PTPRE-203ENST00000442830 P2RX7Q99572 595 aaKnown RBP16.78■□□□□ 0.28
PTPRE-203ENST00000442830 FEZ1Q99689 392 aa16.78■□□□□ 0.28
PTPRE-203ENST00000442830 CCDC8Q9H0W5 538 aaPredicted RBP16.78■□□□□ 0.28
PTPRE-203ENST00000442830 PRO3102Q9H379 93 aa16.78■□□□□ 0.28
PTPRE-203ENST00000442830 CWC22Q9HCG8 908 aaKnown RBP16.78■□□□□ 0.28
PTPRE-203ENST00000442830 CABP5Q9NP86 173 aa16.78■□□□□ 0.28
PTPRE-203ENST00000442830 SAP30BPQ9UHR5 308 aaKnown RBP16.78■□□□□ 0.28
PTPRE-203ENST00000442830 ALPK3Q96L96 1907 aa16.78■□□□□ 0.28
PTPRE-203ENST00000442830 DDX60LQ5H9U9 1706 aaKnown RBP16.77■□□□□ 0.28
PTPRE-203ENST00000442830 MYH8P13535 1937 aa16.77■□□□□ 0.28
PTPRE-203ENST00000442830 USP17L15C9J2P7 530 aa16.77■□□□□ 0.28
PTPRE-203ENST00000442830 USP17L13C9JLJ4 530 aa16.77■□□□□ 0.28
PTPRE-203ENST00000442830 USP17L11C9JVI0 530 aa16.77■□□□□ 0.28
PTPRE-203ENST00000442830 USP17L18D6R9N7 530 aa16.77■□□□□ 0.28
PTPRE-203ENST00000442830 USP17L22D6RA61 530 aa16.77■□□□□ 0.28
PTPRE-203ENST00000442830 USP17L17D6RBQ6 530 aa16.77■□□□□ 0.28
PTPRE-203ENST00000442830 USP17L19D6RCP7 530 aa16.77■□□□□ 0.28
PTPRE-203ENST00000442830 USP17L20D6RJB6 530 aa16.77■□□□□ 0.28
PTPRE-203ENST00000442830 HMMRO75330 724 aa16.77■□□□□ 0.28
PTPRE-203ENST00000442830 ZKSCAN1P17029 563 aaPredicted RBP16.77■□□□□ 0.28
PTPRE-203ENST00000442830 USP17L24Q0WX57 530 aa16.77■□□□□ 0.28
PTPRE-203ENST00000442830 AACSQ86V21 672 aa16.77■□□□□ 0.28
PTPRE-203ENST00000442830 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.77■□□□□ 0.28
PTPRE-203ENST00000442830 PAWRQ96IZ0 340 aaKnown RBP16.77■□□□□ 0.28
PTPRE-203ENST00000442830 NBPF3Q9H094 633 aa16.77■□□□□ 0.28
PTPRE-203ENST00000442830 RABGAP1Q9Y3P9 1069 aa16.77■□□□□ 0.28
PTPRE-203ENST00000442830 ZBED9Q6R2W3 1325 aa16.76■□□□□ 0.27
PTPRE-203ENST00000442830 GH2P01242 217 aa16.76■□□□□ 0.27
PTPRE-203ENST00000442830 DYNLL1P63167 89 aaKnown RBP16.76■□□□□ 0.27
PTPRE-203ENST00000442830 CERKLQ49MI3 558 aaPredicted RBP16.76■□□□□ 0.27
PTPRE-203ENST00000442830 MAP3K21Q5TCX8 1036 aa16.76■□□□□ 0.27
PTPRE-203ENST00000442830 CLASRPQ8N2M8 674 aaKnown RBP16.76■□□□□ 0.27
PTPRE-203ENST00000442830 TRIB2Q92519 343 aa16.76■□□□□ 0.27
PTPRE-203ENST00000442830 APBA2Q99767 749 aa16.76■□□□□ 0.27
PTPRE-203ENST00000442830 CRNKL1Q9BZJ0 848 aaKnown RBP16.76■□□□□ 0.27
PTPRE-203ENST00000442830 KIAA1683Q9H0B3 1180 aa16.76■□□□□ 0.27
PTPRE-203ENST00000442830 TLR7Q9NYK1 1049 aaKnown RBP16.76■□□□□ 0.27
PTPRE-203ENST00000442830 RLBP1P12271 317 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms