RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 SGIP1Q9BQI5 828 aa21.87■■□□□ 1.09
POLR1E-203ENST00000442009 VPS33BQ9H267 617 aa21.87■■□□□ 1.09
POLR1E-203ENST00000442009 ATF5Q9Y2D1 282 aaPredicted RBP21.87■■□□□ 1.09
POLR1E-203ENST00000442009 TSPY2A6NKD2 308 aa21.86■■□□□ 1.09
POLR1E-203ENST00000442009 FIBPO43427 364 aa21.86■■□□□ 1.09
POLR1E-203ENST00000442009 RASA1P20936 1047 aa21.86■■□□□ 1.09
POLR1E-203ENST00000442009 ILDR1Q86SU0 546 aaPredicted RBP21.86■■□□□ 1.09
POLR1E-203ENST00000442009 DGKHQ86XP1 1220 aa21.86■■□□□ 1.09
POLR1E-203ENST00000442009 CRACR2BQ8N4Y2 399 aaPredicted RBP21.86■■□□□ 1.09
POLR1E-203ENST00000442009 SLC44A5Q8NCS7 719 aa21.86■■□□□ 1.09
POLR1E-203ENST00000442009 DDX4Q9NQI0 724 aaKnown RBP21.86■■□□□ 1.09
POLR1E-203ENST00000442009 USP40Q9NVE5 1235 aa21.86■■□□□ 1.09
POLR1E-203ENST00000442009 CSPP1Q1MSJ5 1256 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 TTC6Q86TZ1 520 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 MKNK2Q9HBH9 465 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 DDAH1O94760 285 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 CALM1P0DP23 149 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 CALM2P0DP24 149 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 CALM3P0DP25 149 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 NCLP19338 710 aaKnown RBP21.85■■□□□ 1.09
POLR1E-203ENST00000442009 POLD1P28340 1107 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 CDK8P49336 464 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 UBE2HP62256 183 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 GUCY1B3Q02153 619 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 GABPAQ06546 454 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 FUT2Q10981 343 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 OTUD7BQ6GQQ9 843 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 CATIPQ7Z7H3 387 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 KIAA0825Q8IV33 1275 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 SCAND2PQ9GZW5 306 aaPredicted RBP21.85■■□□□ 1.09
POLR1E-203ENST00000442009 ZNF287Q9HBT7 754 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 GJB4Q9NTQ9 266 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 PIM2Q9P1W9 311 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 COL4A5P29400 1685 aa21.85■■□□□ 1.09
POLR1E-203ENST00000442009 FSD2A1L4K1 749 aa21.84■■□□□ 1.09
POLR1E-203ENST00000442009 FOSBP53539 338 aa21.84■■□□□ 1.09
POLR1E-203ENST00000442009 SSRP1Q08945 709 aaKnown RBP21.84■■□□□ 1.09
POLR1E-203ENST00000442009 AIFM3Q96NN9 605 aa21.84■■□□□ 1.09
POLR1E-203ENST00000442009 ALG1Q9BT22 464 aa21.84■■□□□ 1.09
POLR1E-203ENST00000442009 SERPINA10Q9UK55 444 aa21.84■■□□□ 1.09
POLR1E-203ENST00000442009 CCDC178Q5BJE1 867 aa21.83■■□□□ 1.09
POLR1E-203ENST00000442009 SOGA3Q5TF21 947 aa21.83■■□□□ 1.09
POLR1E-203ENST00000442009 ATL3Q6DD88 541 aa21.83■■□□□ 1.09
POLR1E-203ENST00000442009 CAVIN1Q6NZI2 390 aaKnown RBP21.83■■□□□ 1.09
POLR1E-203ENST00000442009 ZNF444Q8N0Y2 327 aaPredicted RBP21.83■■□□□ 1.09
POLR1E-203ENST00000442009 NUP133Q8WUM0 1156 aa21.83■■□□□ 1.09
POLR1E-203ENST00000442009 TFIP11Q9UBB9 837 aaKnown RBP21.83■■□□□ 1.09
POLR1E-203ENST00000442009 UPF1Q92900 1129 aaKnown RBP eCLIP21.83■■□□□ 1.084e-14■■■■■ 42.3
POLR1E-203ENST00000442009 TMEM63CQ9P1W3 806 aa21.83■■□□□ 1.08
POLR1E-203ENST00000442009 MYH6P13533 1939 aa21.82■■□□□ 1.08
POLR1E-203ENST00000442009 FER1L6Q2WGJ9 1857 aa21.82■■□□□ 1.08
POLR1E-203ENST00000442009 UBE2Q2LH0YL09 131 aa21.82■■□□□ 1.08
POLR1E-203ENST00000442009 NOVP48745 357 aa21.82■■□□□ 1.08
POLR1E-203ENST00000442009 R3HDM1Q15032 1099 aaKnown RBP21.82■■□□□ 1.08
POLR1E-203ENST00000442009 NEDD1Q8NHV4 660 aa21.82■■□□□ 1.08
POLR1E-203ENST00000442009 LEO1Q8WVC0 666 aaPredicted RBP21.82■■□□□ 1.08
POLR1E-203ENST00000442009 SLC26A6Q9BXS9 759 aa21.82■■□□□ 1.08
POLR1E-203ENST00000442009 NPM3O75607 178 aaKnown RBP21.81■■□□□ 1.08
POLR1E-203ENST00000442009 MAP3K14Q99558 947 aa21.81■■□□□ 1.08
POLR1E-203ENST00000442009 OSBPL5Q9H0X9 879 aaPredicted RBP21.81■■□□□ 1.08
POLR1E-203ENST00000442009 RBM28Q9NW13 759 aaKnown RBP21.81■■□□□ 1.08
POLR1E-203ENST00000442009 CFAP45Q9UL16 551 aa21.81■■□□□ 1.08
POLR1E-203ENST00000442009 PCDHAC2Q9Y5I4 1007 aa21.81■■□□□ 1.08
POLR1E-203ENST00000442009 GUCY1A2P33402 732 aa21.8■■□□□ 1.08
POLR1E-203ENST00000442009 KIF23Q02241 960 aaPredicted RBP21.8■■□□□ 1.08
POLR1E-203ENST00000442009 KRT40Q6A162 431 aa21.8■■□□□ 1.08
POLR1E-203ENST00000442009 WASF1Q92558 559 aa21.8■■□□□ 1.08
POLR1E-203ENST00000442009 GMLQ99445 158 aa21.8■■□□□ 1.08
POLR1E-203ENST00000442009 IDI2Q9BXS1 227 aa21.8■■□□□ 1.08
POLR1E-203ENST00000442009 RNF26Q9BY78 433 aaPredicted RBP21.8■■□□□ 1.08
POLR1E-203ENST00000442009 ZNF277Q9NRM2 450 aaPredicted RBP21.8■■□□□ 1.08
POLR1E-203ENST00000442009 RBM27Q9P2N5 1060 aaKnown RBP21.8■■□□□ 1.08
POLR1E-203ENST00000442009 VIL1P09327 827 aaKnown RBP21.8■■□□□ 1.08
POLR1E-203ENST00000442009 TSPY3P0CV98 308 aa21.8■■□□□ 1.08
POLR1E-203ENST00000442009 TSPY8P0CW00 308 aa21.8■■□□□ 1.08
POLR1E-203ENST00000442009 ZNF445P59923 1031 aa21.8■■□□□ 1.08
POLR1E-203ENST00000442009 NFIAQ12857 509 aa21.8■■□□□ 1.08
POLR1E-203ENST00000442009 PICALMQ13492 652 aa21.8■■□□□ 1.08
POLR1E-203ENST00000442009 ZSCAN23Q3MJ62 389 aa21.8■■□□□ 1.08
POLR1E-203ENST00000442009 TRIM22Q8IYM9 498 aa21.8■■□□□ 1.08
POLR1E-203ENST00000442009 CMTR1Q8N1G2 835 aaKnown RBP21.8■■□□□ 1.08
POLR1E-203ENST00000442009 RCOR1Q9UKL0 485 aa21.8■■□□□ 1.08
POLR1E-203ENST00000442009 DEXIO95424 95 aa21.79■■□□□ 1.08
POLR1E-203ENST00000442009 TMTC3Q6ZXV5 915 aa21.79■■□□□ 1.08
POLR1E-203ENST00000442009 BRAPQ7Z569 592 aa21.79■■□□□ 1.08
POLR1E-203ENST00000442009 LARGE2Q8N3Y3 721 aa21.79■■□□□ 1.08
POLR1E-203ENST00000442009 SPATA32Q96LK8 384 aa21.79■■□□□ 1.08
POLR1E-203ENST00000442009 KIF28PB7ZC32 967 aa21.78■■□□□ 1.08
POLR1E-203ENST00000442009 DALRD3Q5D0E6 543 aaKnown RBP21.78■■□□□ 1.08
POLR1E-203ENST00000442009 ISY1Q9ULR0 285 aaKnown RBP21.78■■□□□ 1.08
POLR1E-203ENST00000442009 CD2APQ9Y5K6 639 aa21.78■■□□□ 1.08
POLR1E-203ENST00000442009 MYO3BQ8WXR4 1341 aa21.78■■□□□ 1.08
POLR1E-203ENST00000442009 PLIN4Q96Q06 1357 aa21.78■■□□□ 1.08
POLR1E-203ENST00000442009 PRPF3O43395 683 aaKnown RBP21.78■■□□□ 1.08
POLR1E-203ENST00000442009 U2AF2P26368 475 aaKnown RBP eCLIP21.78■■□□□ 1.08
POLR1E-203ENST00000442009 PKN1Q16512 942 aa21.78■■□□□ 1.08
POLR1E-203ENST00000442009 RSBN1LQ6PCB5 846 aaPredicted RBP21.78■■□□□ 1.08
POLR1E-203ENST00000442009 GAS2L3Q86XJ1 694 aa21.78■■□□□ 1.08
POLR1E-203ENST00000442009 USP28Q96RU2 1077 aa21.78■■□□□ 1.08
POLR1E-203ENST00000442009 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms