RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 TNPO1Q92973 898 aaKnown RBP23.65■■□□□ 1.38
VRK2-207ENST00000440705 PI4KBQ9UBF8 816 aa23.65■■□□□ 1.38
VRK2-207ENST00000440705 KIF3AQ9Y496 699 aa23.65■■□□□ 1.38
VRK2-207ENST00000440705 WDR33Q9C0J8 1336 aaKnown RBP23.64■■□□□ 1.38
VRK2-207ENST00000440705 CPLX1O14810 134 aa23.64■■□□□ 1.38
VRK2-207ENST00000440705 MICU3Q86XE3 530 aa23.64■■□□□ 1.38
VRK2-207ENST00000440705 ZNF70Q9UC06 446 aaPredicted RBP23.64■■□□□ 1.38
VRK2-207ENST00000440705 CTDNEP1O95476 244 aa23.64■■□□□ 1.37
VRK2-207ENST00000440705 BRD1O95696 1058 aa23.64■■□□□ 1.37
VRK2-207ENST00000440705 SYT1P21579 422 aa23.64■■□□□ 1.37
VRK2-207ENST00000440705 SPDYE2Q495Y8 402 aa23.64■■□□□ 1.37
VRK2-207ENST00000440705 FKBP1CQ5VVH2 108 aa23.64■■□□□ 1.37
VRK2-207ENST00000440705 CPLX2Q6PUV4 134 aaKnown RBP23.64■■□□□ 1.37
VRK2-207ENST00000440705 DGKHQ86XP1 1220 aa23.64■■□□□ 1.37
VRK2-207ENST00000440705 ZSCAN29Q8IWY8 852 aaPredicted RBP23.64■■□□□ 1.37
VRK2-207ENST00000440705 ZFPM1Q8IX07 1006 aa23.64■■□□□ 1.37
VRK2-207ENST00000440705 ZNF654Q8IZM8 581 aa23.64■■□□□ 1.37
VRK2-207ENST00000440705 MYOZ2Q9NPC6 264 aa23.64■■□□□ 1.37
VRK2-207ENST00000440705 GJA3Q9Y6H8 435 aa23.64■■□□□ 1.37
VRK2-207ENST00000440705 NID2Q14112 1375 aa23.63■■□□□ 1.37
VRK2-207ENST00000440705 COL2A1P02458 1487 aaPredicted RBP23.63■■□□□ 1.37
VRK2-207ENST00000440705 GOLGA8AA7E2F4 631 aa23.63■■□□□ 1.37
VRK2-207ENST00000440705 STX6O43752 255 aa23.63■■□□□ 1.37
VRK2-207ENST00000440705 JAK2O60674 1132 aa23.63■■□□□ 1.37
VRK2-207ENST00000440705 GMPSP49915 693 aaPredicted RBP23.63■■□□□ 1.37
VRK2-207ENST00000440705 PPP2R5BQ15173 497 aa23.63■■□□□ 1.37
VRK2-207ENST00000440705 LARP1BQ659C4 914 aaKnown RBP23.63■■□□□ 1.37
VRK2-207ENST00000440705 CATIPQ7Z7H3 387 aa23.63■■□□□ 1.37
VRK2-207ENST00000440705 ZBED3Q96IU2 234 aaPredicted RBP23.63■■□□□ 1.37
VRK2-207ENST00000440705 ZDHHC9Q9Y397 364 aa23.63■■□□□ 1.37
VRK2-207ENST00000440705 SBF1O95248 1867 aa23.62■■□□□ 1.37
VRK2-207ENST00000440705 PTPDC1A2A3K4 754 aa23.62■■□□□ 1.37
VRK2-207ENST00000440705 CDKL5O76039 1030 aa23.62■■□□□ 1.37
VRK2-207ENST00000440705 RAB11FIP4Q86YS3 637 aa23.62■■□□□ 1.37
VRK2-207ENST00000440705 FOXP4Q8IVH2 680 aaPredicted RBP23.62■■□□□ 1.37
VRK2-207ENST00000440705 FAM184AQ8NB25 1140 aa23.62■■□□□ 1.37
VRK2-207ENST00000440705 NEDD1Q8NHV4 660 aa23.62■■□□□ 1.37
VRK2-207ENST00000440705 ANKS1AQ92625 1134 aa23.62■■□□□ 1.37
VRK2-207ENST00000440705 ATRNL1Q5VV63 1379 aa23.62■■□□□ 1.37
VRK2-207ENST00000440705 CCDC196A0A1B0GTZ2 297 aa23.61■■□□□ 1.37
VRK2-207ENST00000440705 DDTLA6NHG4 134 aaPredicted RBP23.61■■□□□ 1.37
VRK2-207ENST00000440705 NMT2O60551 498 aa23.61■■□□□ 1.37
VRK2-207ENST00000440705 CALM1P0DP23 149 aa23.61■■□□□ 1.37
VRK2-207ENST00000440705 CALM2P0DP24 149 aa23.61■■□□□ 1.37
VRK2-207ENST00000440705 CALM3P0DP25 149 aa23.61■■□□□ 1.37
VRK2-207ENST00000440705 MYL10Q9BUA6 226 aa23.61■■□□□ 1.37
VRK2-207ENST00000440705 IL17RBQ9NRM6 502 aa23.61■■□□□ 1.37
VRK2-207ENST00000440705 CLRN2A0PK11 232 aa23.6■■□□□ 1.37
VRK2-207ENST00000440705 WNT10BO00744 389 aa23.6■■□□□ 1.37
VRK2-207ENST00000440705 NFKBIBQ15653 356 aa23.6■■□□□ 1.37
VRK2-207ENST00000440705 CRACR2BQ8N4Y2 399 aaPredicted RBP23.6■■□□□ 1.37
VRK2-207ENST00000440705 DDX11Q96FC9 970 aa23.6■■□□□ 1.37
VRK2-207ENST00000440705 GBP4Q96PP9 640 aa23.6■■□□□ 1.37
VRK2-207ENST00000440705 CNOT7Q9UIV1 285 aaKnown RBP23.6■■□□□ 1.37
VRK2-207ENST00000440705 ZNF541Q9H0D2 1346 aa23.6■■□□□ 1.37
VRK2-207ENST00000440705 MYH8P13535 1937 aa23.6■■□□□ 1.37
VRK2-207ENST00000440705 DDAH1O94760 285 aa23.6■■□□□ 1.37
VRK2-207ENST00000440705 YBX3P16989 372 aaKnown RBP eCLIP23.6■■□□□ 1.376e-6■□□□□ 10.9
VRK2-207ENST00000440705 RXRAP19793 462 aa23.6■■□□□ 1.37
VRK2-207ENST00000440705 ADD1P35611 737 aaKnown RBP23.6■■□□□ 1.37
VRK2-207ENST00000440705 RTN1Q16799 776 aa23.6■■□□□ 1.37
VRK2-207ENST00000440705 SH3BP5LQ7L8J4 393 aa23.6■■□□□ 1.37
VRK2-207ENST00000440705 MICALL2Q8IY33 904 aa23.6■■□□□ 1.37
VRK2-207ENST00000440705 FANCBQ8NB91 859 aa23.6■■□□□ 1.37
VRK2-207ENST00000440705 FAM151AQ8WW52 585 aa23.6■■□□□ 1.37
VRK2-207ENST00000440705 TRIM34Q9BYJ4 488 aa23.6■■□□□ 1.37
VRK2-207ENST00000440705 TCP10L2B9ZVM9 353 aa23.59■■□□□ 1.37
VRK2-207ENST00000440705 DTNBO60941 627 aa23.59■■□□□ 1.37
VRK2-207ENST00000440705 RCSD1Q6JBY9 416 aa23.59■■□□□ 1.37
VRK2-207ENST00000440705 CLEC17AQ6ZS10 378 aa23.59■■□□□ 1.37
VRK2-207ENST00000440705 GPC2Q8N158 579 aa23.59■■□□□ 1.37
VRK2-207ENST00000440705 NUP133Q8WUM0 1156 aa23.59■■□□□ 1.37
VRK2-207ENST00000440705 PLIN4Q96Q06 1357 aa23.58■■□□□ 1.37
VRK2-207ENST00000440705 ZSCAN22P10073 491 aaPredicted RBP23.58■■□□□ 1.37
VRK2-207ENST00000440705 CDC27P30260 824 aa23.58■■□□□ 1.37
VRK2-207ENST00000440705 SHMT1P34896 483 aa23.58■■□□□ 1.37
VRK2-207ENST00000440705 FAM83AQ86UY5 434 aa23.58■■□□□ 1.37
VRK2-207ENST00000440705 METTL16Q86W50 562 aaKnown RBP23.58■■□□□ 1.37
VRK2-207ENST00000440705 CCDC144CPQ8IYA2 1237 aa23.58■■□□□ 1.37
VRK2-207ENST00000440705 CCDC17Q96LX7 622 aa23.58■■□□□ 1.37
VRK2-207ENST00000440705 KAT14Q9H8E8 782 aa23.58■■□□□ 1.37
VRK2-207ENST00000440705 FAM217BQ9NTX9 383 aaPredicted RBP23.58■■□□□ 1.37
VRK2-207ENST00000440705 NBPF9Q3BBW0 867 aa23.57■■□□□ 1.36
VRK2-207ENST00000440705 VEZTQ9HBM0 779 aa23.57■■□□□ 1.36
VRK2-207ENST00000440705 SHTN1A0MZ66 631 aa23.57■■□□□ 1.36
VRK2-207ENST00000440705 H7C1D1 291 aa23.57■■□□□ 1.36
VRK2-207ENST00000440705 TROAPQ12815 778 aa23.57■■□□□ 1.36
VRK2-207ENST00000440705 CSRNP1Q96S65 589 aa23.56■■□□□ 1.36
VRK2-207ENST00000440705 RBM28Q9NW13 759 aaKnown RBP23.56■■□□□ 1.36
VRK2-207ENST00000440705 ORC3Q9UBD5 711 aaPredicted RBP23.56■■□□□ 1.36
VRK2-207ENST00000440705 MTMR6Q9Y217 621 aa23.56■■□□□ 1.36
VRK2-207ENST00000440705 SIPA1L1O43166 1804 aa23.55■■□□□ 1.36
VRK2-207ENST00000440705 VPS37CA5D8V6 355 aaPredicted RBP23.55■■□□□ 1.36
VRK2-207ENST00000440705 TNNI2P48788 182 aa23.55■■□□□ 1.36
VRK2-207ENST00000440705 NTRK3Q16288 839 aa23.55■■□□□ 1.36
VRK2-207ENST00000440705 RBM26Q5T8P6 1007 aaKnown RBP23.55■■□□□ 1.36
VRK2-207ENST00000440705 FOXD4L5Q5VV16 416 aaPredicted RBP23.55■■□□□ 1.36
VRK2-207ENST00000440705 FOXD4L4Q8WXT5 416 aaPredicted RBP23.55■■□□□ 1.36
VRK2-207ENST00000440705 RNF181Q9P0P0 153 aa23.55■■□□□ 1.36
VRK2-207ENST00000440705 STX8Q9UNK0 236 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms