RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 SAP30BPQ9UHR5 308 aaKnown RBP25.29■■□□□ 1.64
CPNE1-219ENST00000440240 USP17L10C9JJH3 530 aa25.28■■□□□ 1.64
CPNE1-219ENST00000440240 H0YGN5 161 aa25.28■■□□□ 1.64
CPNE1-219ENST00000440240 IRX3P78415 501 aaPredicted RBP25.28■■□□□ 1.64
CPNE1-219ENST00000440240 AACSQ86V21 672 aa25.28■■□□□ 1.64
CPNE1-219ENST00000440240 PANK1Q8TE04 598 aa25.28■■□□□ 1.64
CPNE1-219ENST00000440240 TAOK2Q9UL54 1235 aa25.28■■□□□ 1.64
CPNE1-219ENST00000440240 EXOC6BQ9Y2D4 811 aa25.28■■□□□ 1.64
CPNE1-219ENST00000440240 USP5P45974 858 aa25.27■■□□□ 1.64
CPNE1-219ENST00000440240 JAG1P78504 1218 aa25.27■■□□□ 1.64
CPNE1-219ENST00000440240 MAGEB6Q8N7X4 407 aa25.27■■□□□ 1.64
CPNE1-219ENST00000440240 MORF4L1Q9UBU8 362 aa25.27■■□□□ 1.64
CPNE1-219ENST00000440240 MAST2Q6P0Q8 1798 aa25.26■■□□□ 1.63
CPNE1-219ENST00000440240 MIGA1Q8NAN2 632 aa25.26■■□□□ 1.63
CPNE1-219ENST00000440240 ZBTB21Q9ULJ3 1066 aa25.26■■□□□ 1.63
CPNE1-219ENST00000440240 COLQQ9Y215 455 aaPredicted RBP25.26■■□□□ 1.63
CPNE1-219ENST00000440240 GDF11O95390 407 aa25.25■■□□□ 1.63
CPNE1-219ENST00000440240 TFRCP02786 760 aaKnown RBP25.25■■□□□ 1.63
CPNE1-219ENST00000440240 P2RX7Q99572 595 aaKnown RBP25.25■■□□□ 1.63
CPNE1-219ENST00000440240 ANTXR1Q9H6X2 564 aa25.25■■□□□ 1.63
CPNE1-219ENST00000440240 ATAD5Q96QE3 1844 aa25.24■■□□□ 1.63
CPNE1-219ENST00000440240 LOC285556D6RIA3 1793 aa25.24■■□□□ 1.63
CPNE1-219ENST00000440240 FARP2O94887 1054 aaPredicted RBP25.24■■□□□ 1.63
CPNE1-219ENST00000440240 TTF1Q15361 905 aaPredicted RBP25.24■■□□□ 1.63
CPNE1-219ENST00000440240 TTC6Q86TZ1 520 aa25.24■■□□□ 1.63
CPNE1-219ENST00000440240 RHPN1Q8TCX5 695 aa25.24■■□□□ 1.63
CPNE1-219ENST00000440240 DEFB118Q96PH6 123 aa25.24■■□□□ 1.63
CPNE1-219ENST00000440240 PAK6Q9NQU5 681 aaPredicted RBP25.24■■□□□ 1.63
CPNE1-219ENST00000440240 GJD2Q9UKL4 321 aa25.24■■□□□ 1.63
CPNE1-219ENST00000440240 TATDN1Q6P1N9 297 aa25.23■■□□□ 1.63
CPNE1-219ENST00000440240 RPAP2Q8IXW5 612 aaPredicted RBP25.23■■□□□ 1.63
CPNE1-219ENST00000440240 GPRC5AQ8NFJ5 357 aa25.23■■□□□ 1.63
CPNE1-219ENST00000440240 EHD4Q9H223 541 aa25.23■■□□□ 1.63
CPNE1-219ENST00000440240 IL1RAPL2Q9NP60 686 aa25.23■■□□□ 1.63
CPNE1-219ENST00000440240 SERPINB13Q9UIV8 391 aa25.23■■□□□ 1.63
CPNE1-219ENST00000440240 NDUFB9Q9Y6M9 179 aa25.23■■□□□ 1.63
CPNE1-219ENST00000440240 DOCK3Q8IZD9 2030 aa25.22■■□□□ 1.63
CPNE1-219ENST00000440240 HERVK_113P62684 666 aa25.22■■□□□ 1.63
CPNE1-219ENST00000440240 CLASRPQ8N2M8 674 aaKnown RBP25.22■■□□□ 1.63
CPNE1-219ENST00000440240 NR2E3Q9Y5X4 410 aa25.22■■□□□ 1.63
CPNE1-219ENST00000440240 SIPA1L1O43166 1804 aa25.21■■□□□ 1.63
CPNE1-219ENST00000440240 HMMRO75330 724 aa25.21■■□□□ 1.63
CPNE1-219ENST00000440240 GH2P01242 217 aa25.21■■□□□ 1.63
CPNE1-219ENST00000440240 HMGCRP04035 888 aa25.21■■□□□ 1.63
CPNE1-219ENST00000440240 SHROOM1Q2M3G4 852 aaPredicted RBP25.21■■□□□ 1.63
CPNE1-219ENST00000440240 USP17L2Q6R6M4 530 aa25.21■■□□□ 1.63
CPNE1-219ENST00000440240 KIF1BPQ96EK5 621 aa25.21■■□□□ 1.63
CPNE1-219ENST00000440240 MYO5AQ9Y4I1 1855 aaKnown RBP25.21■■□□□ 1.63
CPNE1-219ENST00000440240 FXR1P51114 621 aaKnown RBP eCLIP25.2■■□□□ 1.62
CPNE1-219ENST00000440240 GTF3C2Q8WUA4 911 aaPredicted RBP25.2■■□□□ 1.62
CPNE1-219ENST00000440240 CRISPLD2Q9H0B8 497 aa25.2■■□□□ 1.62
CPNE1-219ENST00000440240 EMILIN3Q9NT22 766 aa25.2■■□□□ 1.62
CPNE1-219ENST00000440240 DDX19BQ9UMR2 479 aa25.2■■□□□ 1.62
CPNE1-219ENST00000440240 FOCADQ5VW36 1801 aa25.19■■□□□ 1.62
CPNE1-219ENST00000440240 CCAR1Q8IX12 1150 aaKnown RBP25.19■■□□□ 1.62
CPNE1-219ENST00000440240 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.19■■□□□ 1.626e-9■□□□□ 10.4
CPNE1-219ENST00000440240 CHMP4BQ9H444 224 aaKnown RBP25.19■■□□□ 1.62
CPNE1-219ENST00000440240 RBPJLQ9UBG7 517 aa25.19■■□□□ 1.62
CPNE1-219ENST00000440240 CDK5RAP2Q96SN8 1893 aa25.19■■□□□ 1.62
CPNE1-219ENST00000440240 TRIOBPQ9H2D6 2365 aa25.18■■□□□ 1.62
CPNE1-219ENST00000440240 RPTORQ8N122 1335 aa25.18■■□□□ 1.62
CPNE1-219ENST00000440240 MAGEB6P1A0A0J9YX57 407 aa25.18■■□□□ 1.62
CPNE1-219ENST00000440240 MAPK4P31152 587 aa25.18■■□□□ 1.62
CPNE1-219ENST00000440240 CERKLQ49MI3 558 aaPredicted RBP25.18■■□□□ 1.62
CPNE1-219ENST00000440240 SLC9C2Q5TAH2 1124 aa25.18■■□□□ 1.62
CPNE1-219ENST00000440240 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.18■■□□□ 1.62
CPNE1-219ENST00000440240 NUDT12Q9BQG2 462 aa25.18■■□□□ 1.62
CPNE1-219ENST00000440240 RIOK1Q9BRS2 568 aaKnown RBP25.18■■□□□ 1.62
CPNE1-219ENST00000440240 HMX1Q9NP08 348 aaPredicted RBP25.18■■□□□ 1.62
CPNE1-219ENST00000440240 CABP5Q9NP86 173 aa25.18■■□□□ 1.62
CPNE1-219ENST00000440240 IFIT2P09913 472 aaKnown RBP25.17■■□□□ 1.62
CPNE1-219ENST00000440240 USP14P54578 494 aa25.17■■□□□ 1.62
CPNE1-219ENST00000440240 ABCB5Q2M3G0 1257 aa25.17■■□□□ 1.62
CPNE1-219ENST00000440240 CHRDL2Q6WN34 429 aa25.17■■□□□ 1.62
CPNE1-219ENST00000440240 SOCS4Q8WXH5 440 aa25.17■■□□□ 1.62
CPNE1-219ENST00000440240 FEZ1Q99689 392 aa25.17■■□□□ 1.62
CPNE1-219ENST00000440240 TXNRD2Q9NNW7 524 aa25.17■■□□□ 1.62
CPNE1-219ENST00000440240 ZBTB40Q9NUA8 1239 aa25.17■■□□□ 1.62
CPNE1-219ENST00000440240 RAB11FIP3O75154 756 aa25.16■■□□□ 1.62
CPNE1-219ENST00000440240 POLR3DP05423 398 aaPredicted RBP25.16■■□□□ 1.62
CPNE1-219ENST00000440240 XRCC5P13010 732 aaKnown RBP25.16■■□□□ 1.62
CPNE1-219ENST00000440240 RAB3GAP1Q15042 981 aa25.16■■□□□ 1.62
CPNE1-219ENST00000440240 C12orf42Q96LP6 360 aa25.16■■□□□ 1.62
CPNE1-219ENST00000440240 CRNKL1Q9BZJ0 848 aaKnown RBP25.16■■□□□ 1.62
CPNE1-219ENST00000440240 USP17L15C9J2P7 530 aa25.15■■□□□ 1.62
CPNE1-219ENST00000440240 USP17L13C9JLJ4 530 aa25.15■■□□□ 1.62
CPNE1-219ENST00000440240 USP17L11C9JVI0 530 aa25.15■■□□□ 1.62
CPNE1-219ENST00000440240 USP17L18D6R9N7 530 aa25.15■■□□□ 1.62
CPNE1-219ENST00000440240 USP17L22D6RA61 530 aa25.15■■□□□ 1.62
CPNE1-219ENST00000440240 USP17L17D6RBQ6 530 aa25.15■■□□□ 1.62
CPNE1-219ENST00000440240 USP17L19D6RCP7 530 aa25.15■■□□□ 1.62
CPNE1-219ENST00000440240 USP17L20D6RJB6 530 aa25.15■■□□□ 1.62
CPNE1-219ENST00000440240 APBB1O00213 710 aa25.15■■□□□ 1.62
CPNE1-219ENST00000440240 EVI5O60447 810 aa25.15■■□□□ 1.62
CPNE1-219ENST00000440240 CYP2B6P20813 491 aa25.15■■□□□ 1.62
CPNE1-219ENST00000440240 PLCD1P51178 756 aa25.15■■□□□ 1.62
CPNE1-219ENST00000440240 ERVK-9P63128 1117 aa25.15■■□□□ 1.62
CPNE1-219ENST00000440240 ERVK-24P63145 666 aa25.15■■□□□ 1.62
CPNE1-219ENST00000440240 USP17L24Q0WX57 530 aa25.15■■□□□ 1.62
CPNE1-219ENST00000440240 PDE3AQ14432 1141 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms