RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 CERKLQ49MI3 558 aaPredicted RBP14.14□□□□□ -0.15
HSPG2-206ENST00000439717 IFNL3Q8IZI9 196 aa14.14□□□□□ -0.15
HSPG2-206ENST00000439717 FAM227BQ96M60 508 aa14.14□□□□□ -0.15
HSPG2-206ENST00000439717 AFG3L2Q9Y4W6 797 aa14.14□□□□□ -0.15
HSPG2-206ENST00000439717 A0A0D9SFI3 127 aa14.13□□□□□ -0.15
HSPG2-206ENST00000439717 TRPA1O75762 1119 aa14.13□□□□□ -0.15
HSPG2-206ENST00000439717 SHMT1P34896 483 aa14.13□□□□□ -0.15
HSPG2-206ENST00000439717 BRI3BPQ8WY22 251 aa14.13□□□□□ -0.15
HSPG2-206ENST00000439717 PTPN18Q99952 460 aa14.13□□□□□ -0.15
HSPG2-206ENST00000439717 CFHR5Q9BXR6 569 aa14.13□□□□□ -0.15
HSPG2-206ENST00000439717 AS3MTQ9HBK9 375 aa14.13□□□□□ -0.15
HSPG2-206ENST00000439717 EPB41L4AQ9HCS5 686 aaPredicted RBP14.13□□□□□ -0.15
HSPG2-206ENST00000439717 ZCCHC17Q9NP64 241 aaKnown RBP14.13□□□□□ -0.15
HSPG2-206ENST00000439717 DIAPH3Q9NSV4 1193 aa14.13□□□□□ -0.15
HSPG2-206ENST00000439717 PPP4R2Q9NY27 417 aa14.13□□□□□ -0.15
HSPG2-206ENST00000439717 IGF2BP3O00425 579 aaKnown RBP eCLIP14.12□□□□□ -0.15
HSPG2-206ENST00000439717 GDF11O95390 407 aa14.12□□□□□ -0.15
HSPG2-206ENST00000439717 HSPA8P11142 646 aaKnown RBP14.12□□□□□ -0.15
HSPG2-206ENST00000439717 ABCB5Q2M3G0 1257 aa14.12□□□□□ -0.15
HSPG2-206ENST00000439717 CCDC129Q6ZRS4 1044 aa14.12□□□□□ -0.15
HSPG2-206ENST00000439717 C16orf86Q6ZW13 317 aa14.12□□□□□ -0.15
HSPG2-206ENST00000439717 ZNF280CQ8ND82 737 aa14.12□□□□□ -0.15
HSPG2-206ENST00000439717 WDR18Q9BV38 432 aa14.12□□□□□ -0.15
HSPG2-206ENST00000439717 NAPBQ9H115 298 aa14.12□□□□□ -0.15
HSPG2-206ENST00000439717 CABP5Q9NP86 173 aa14.12□□□□□ -0.15
HSPG2-206ENST00000439717 ZBTB21Q9ULJ3 1066 aa14.12□□□□□ -0.15
HSPG2-206ENST00000439717 CCDC171Q6TFL3 1326 aa14.12□□□□□ -0.15
HSPG2-206ENST00000439717 ROBO3Q96MS0 1386 aa14.11□□□□□ -0.15
HSPG2-206ENST00000439717 CYP2D7A0A087X1C5 515 aa14.11□□□□□ -0.15
HSPG2-206ENST00000439717 A0A0G2JLL6 359 aaPredicted RBP14.11□□□□□ -0.15
HSPG2-206ENST00000439717 MINDY4BA8MYZ0 360 aa14.11□□□□□ -0.15
HSPG2-206ENST00000439717 GH2P01242 217 aa14.11□□□□□ -0.15
HSPG2-206ENST00000439717 CDK8P49336 464 aa14.11□□□□□ -0.15
HSPG2-206ENST00000439717 JAG1P78504 1218 aa14.11□□□□□ -0.15
HSPG2-206ENST00000439717 EVX2Q03828 476 aa14.11□□□□□ -0.15
HSPG2-206ENST00000439717 ALX1Q15699 326 aa14.11□□□□□ -0.15
HSPG2-206ENST00000439717 FASTKD5Q7L8L6 764 aaKnown RBP14.11□□□□□ -0.15
HSPG2-206ENST00000439717 PRRT2Q7Z6L0 340 aaPredicted RBP14.11□□□□□ -0.15
HSPG2-206ENST00000439717 DYNLL2Q96FJ2 89 aa14.11□□□□□ -0.15
HSPG2-206ENST00000439717 CCDC17Q96LX7 622 aa14.11□□□□□ -0.15
HSPG2-206ENST00000439717 ZNF287Q9HBT7 754 aa14.11□□□□□ -0.15
HSPG2-206ENST00000439717 PRDM10Q9NQV6 1147 aa14.11□□□□□ -0.15
HSPG2-206ENST00000439717 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.11□□□□□ -0.15
HSPG2-206ENST00000439717 BAZ2AQ9UIF9 1905 aaKnown RBP14.11□□□□□ -0.15
HSPG2-206ENST00000439717 ATAD5Q96QE3 1844 aa14.11□□□□□ -0.15
HSPG2-206ENST00000439717 FOXP2O15409 715 aa14.1□□□□□ -0.15
HSPG2-206ENST00000439717 LBX1P52954 281 aa14.1□□□□□ -0.15
HSPG2-206ENST00000439717 SPP2Q13103 211 aa14.1□□□□□ -0.15
HSPG2-206ENST00000439717 NOM1Q5C9Z4 860 aaKnown RBP14.1□□□□□ -0.15
HSPG2-206ENST00000439717 CWC27Q6UX04 472 aaKnown RBP14.1□□□□□ -0.15
HSPG2-206ENST00000439717 ANKRD23Q86SG2 305 aa14.1□□□□□ -0.15
HSPG2-206ENST00000439717 ZNF589Q86UQ0 364 aaPredicted RBP14.1□□□□□ -0.15
HSPG2-206ENST00000439717 SLC44A5Q8NCS7 719 aa14.1□□□□□ -0.15
HSPG2-206ENST00000439717 ZMYM6O95789 1325 aa14.1□□□□□ -0.15
HSPG2-206ENST00000439717 PHIPQ8WWQ0 1821 aa14.09□□□□□ -0.15
HSPG2-206ENST00000439717 TRIM75PA6NK02 468 aa14.09□□□□□ -0.15
HSPG2-206ENST00000439717 C19orf81C9J6K1 198 aa14.09□□□□□ -0.15
HSPG2-206ENST00000439717 BTBD19C9JJ37 291 aa14.09□□□□□ -0.15
HSPG2-206ENST00000439717 SLC3A2P08195 630 aaKnown RBP14.09□□□□□ -0.15
HSPG2-206ENST00000439717 HSPD1P10809 573 aaKnown RBP14.09□□□□□ -0.15
HSPG2-206ENST00000439717 MOGSQ13724 837 aa14.09□□□□□ -0.15
HSPG2-206ENST00000439717 SHROOM1Q2M3G4 852 aaPredicted RBP14.09□□□□□ -0.15
HSPG2-206ENST00000439717 SH3D19Q5HYK7 790 aa14.09□□□□□ -0.15
HSPG2-206ENST00000439717 VPS53Q5VIR6 699 aa14.09□□□□□ -0.15
HSPG2-206ENST00000439717 TMEM179Q6ZVK1 233 aa14.09□□□□□ -0.15
HSPG2-206ENST00000439717 CCDC84Q86UT8 332 aaPredicted RBP14.09□□□□□ -0.15
HSPG2-206ENST00000439717 FAM43AQ8N2R8 423 aa14.09□□□□□ -0.15
HSPG2-206ENST00000439717 RUFY2Q8WXA3 655 aa14.09□□□□□ -0.15
HSPG2-206ENST00000439717 TSKSQ9UJT2 592 aa14.09□□□□□ -0.15
HSPG2-206ENST00000439717 SMIM22K7EJ46 135 aa14.08□□□□□ -0.16
HSPG2-206ENST00000439717 MPHOSPH10O00566 681 aaKnown RBP14.08□□□□□ -0.16
HSPG2-206ENST00000439717 TBC1D8O95759 1140 aa14.08□□□□□ -0.16
HSPG2-206ENST00000439717 CHMLP26374 656 aa14.08□□□□□ -0.16
HSPG2-206ENST00000439717 BACE1P56817 501 aa14.08□□□□□ -0.16
HSPG2-206ENST00000439717 PDE4BQ07343 736 aa14.08□□□□□ -0.16
HSPG2-206ENST00000439717 PPARAQ07869 468 aa14.08□□□□□ -0.16
HSPG2-206ENST00000439717 RAB3GAP1Q15042 981 aa14.08□□□□□ -0.16
HSPG2-206ENST00000439717 PROCA1Q8NCQ7 364 aaPredicted RBP14.08□□□□□ -0.16
HSPG2-206ENST00000439717 MKNK2Q9HBH9 465 aa14.08□□□□□ -0.16
HSPG2-206ENST00000439717 ANAPC4Q9UJX5 808 aa14.08□□□□□ -0.16
HSPG2-206ENST00000439717 SLC45A1Q9Y2W3 748 aa14.08□□□□□ -0.16
HSPG2-206ENST00000439717 RAD50Q92878 1312 aa14.08□□□□□ -0.16
HSPG2-206ENST00000439717 USP17L10C9JJH3 530 aa14.07□□□□□ -0.16
HSPG2-206ENST00000439717 FGAP02671 866 aa14.07□□□□□ -0.16
HSPG2-206ENST00000439717 GUCY1A2P33402 732 aa14.07□□□□□ -0.16
HSPG2-206ENST00000439717 TAF1CQ15572 869 aaPredicted RBP14.07□□□□□ -0.16
HSPG2-206ENST00000439717 BMP2KLQ5H9B9 411 aa14.07□□□□□ -0.16
HSPG2-206ENST00000439717 GPAT2Q6NUI2 795 aa14.07□□□□□ -0.16
HSPG2-206ENST00000439717 GADL1Q6ZQY3 521 aa14.07□□□□□ -0.16
HSPG2-206ENST00000439717 ZFYVE28Q9HCC9 887 aa14.07□□□□□ -0.16
HSPG2-206ENST00000439717 AGTPBP1Q9UPW5 1226 aa14.07□□□□□ -0.16
HSPG2-206ENST00000439717 GPR25O00155 361 aa14.06□□□□□ -0.16
HSPG2-206ENST00000439717 PDHXO00330 501 aa14.06□□□□□ -0.16
HSPG2-206ENST00000439717 AKR1B1P15121 316 aa14.06□□□□□ -0.16
HSPG2-206ENST00000439717 RASA1P20936 1047 aa14.06□□□□□ -0.16
HSPG2-206ENST00000439717 PABPC4Q13310 644 aaKnown RBP eCLIP14.06□□□□□ -0.16
HSPG2-206ENST00000439717 CRHR2Q13324 411 aa14.06□□□□□ -0.16
HSPG2-206ENST00000439717 MTMR2Q13614 643 aa14.06□□□□□ -0.16
HSPG2-206ENST00000439717 SEPT2Q15019 361 aa14.06□□□□□ -0.16
HSPG2-206ENST00000439717 ZNF444Q8N0Y2 327 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms