RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 WIPI1Q5MNZ9 446 aaPredicted RBP7.64□□□□□ -1.19
UPP2-IT1-201ENST00000439185 TTBK2Q6IQ55 1244 aa7.64□□□□□ -1.19
UPP2-IT1-201ENST00000439185 HID1Q8IV36 788 aa7.64□□□□□ -1.19
UPP2-IT1-201ENST00000439185 MFSD4AQ8N468 514 aa7.64□□□□□ -1.19
UPP2-IT1-201ENST00000439185 MFSD2AQ8NA29 543 aa7.64□□□□□ -1.19
UPP2-IT1-201ENST00000439185 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.63□□□□□ -1.19
UPP2-IT1-201ENST00000439185 H3BS24 57 aa7.63□□□□□ -1.19
UPP2-IT1-201ENST00000439185 CBX7O95931 251 aa7.63□□□□□ -1.19
UPP2-IT1-201ENST00000439185 ZNF865P0CJ78 1059 aaPredicted RBP7.63□□□□□ -1.19
UPP2-IT1-201ENST00000439185 CAP2P40123 477 aa7.63□□□□□ -1.19
UPP2-IT1-201ENST00000439185 LETMD1Q6P1Q0 360 aa7.63□□□□□ -1.19
UPP2-IT1-201ENST00000439185 C22orf34Q6ZV56 151 aa7.63□□□□□ -1.19
UPP2-IT1-201ENST00000439185 NPAS4Q8IUM7 802 aa7.63□□□□□ -1.19
UPP2-IT1-201ENST00000439185 FRMD6Q96NE9 622 aa7.63□□□□□ -1.19
UPP2-IT1-201ENST00000439185 KRTAP4-7Q9BYR0 210 aa7.63□□□□□ -1.19
UPP2-IT1-201ENST00000439185 GRK4P32298 578 aa7.62□□□□□ -1.19
UPP2-IT1-201ENST00000439185 XAGE3Q8WTP9 111 aa7.62□□□□□ -1.19
UPP2-IT1-201ENST00000439185 KIRREL1Q96J84 757 aa7.62□□□□□ -1.19
UPP2-IT1-201ENST00000439185 CAPN6Q9Y6Q1 641 aa7.62□□□□□ -1.19
UPP2-IT1-201ENST00000439185 RBAK-RBAKDNI3L0D1 243 aa7.61□□□□□ -1.19
UPP2-IT1-201ENST00000439185 CST3P01034 146 aaPredicted RBP7.61□□□□□ -1.19
UPP2-IT1-201ENST00000439185 GLI1P08151 1106 aa7.61□□□□□ -1.19
UPP2-IT1-201ENST00000439185 EIF4BP23588 611 aaKnown RBP7.61□□□□□ -1.19
UPP2-IT1-201ENST00000439185 PRAMEF13Q5VWM6 474 aa7.61□□□□□ -1.19
UPP2-IT1-201ENST00000439185 C19orf73Q9NVV2 129 aa7.61□□□□□ -1.19
UPP2-IT1-201ENST00000439185 PCDHB5Q9Y5E4 795 aa7.61□□□□□ -1.19
UPP2-IT1-201ENST00000439185 ST14Q9Y5Y6 855 aa7.61□□□□□ -1.19
UPP2-IT1-201ENST00000439185 LMNB1P20700 586 aa7.6□□□□□ -1.19
UPP2-IT1-201ENST00000439185 GDNFP39905 211 aa7.6□□□□□ -1.19
UPP2-IT1-201ENST00000439185 KCNA1Q09470 495 aa7.6□□□□□ -1.19
UPP2-IT1-201ENST00000439185 SEPT6Q14141 434 aa7.6□□□□□ -1.19
UPP2-IT1-201ENST00000439185 CCDC85BQ15834 202 aaPredicted RBP7.6□□□□□ -1.19
UPP2-IT1-201ENST00000439185 TMEM67Q5HYA8 995 aa7.6□□□□□ -1.19
UPP2-IT1-201ENST00000439185 CDH24Q86UP0 819 aa7.6□□□□□ -1.19
UPP2-IT1-201ENST00000439185 BHLHE22Q8NFJ8 381 aaPredicted RBP7.6□□□□□ -1.19
UPP2-IT1-201ENST00000439185 UBE2FQ969M7 185 aa7.6□□□□□ -1.19
UPP2-IT1-201ENST00000439185 GFRA2O00451 464 aa7.59□□□□□ -1.19
UPP2-IT1-201ENST00000439185 GNA15P30679 374 aa7.59□□□□□ -1.19
UPP2-IT1-201ENST00000439185 FBLN7Q53RD9 439 aa7.59□□□□□ -1.19
UPP2-IT1-201ENST00000439185 ZNF746Q6NUN9 644 aaPredicted RBP7.59□□□□□ -1.19
UPP2-IT1-201ENST00000439185 MPZL3Q6UWV2 235 aa7.59□□□□□ -1.19
UPP2-IT1-201ENST00000439185 SPOCD1Q6ZMY3 1216 aa7.59□□□□□ -1.19
UPP2-IT1-201ENST00000439185 PRR23BQ6ZRT6 265 aa7.59□□□□□ -1.19
UPP2-IT1-201ENST00000439185 ZSWIM5Q9P217 1185 aa7.59□□□□□ -1.19
UPP2-IT1-201ENST00000439185 CYP7A1P22680 504 aa7.58□□□□□ -1.2
UPP2-IT1-201ENST00000439185 RAP1GAPP47736 663 aa7.58□□□□□ -1.2
UPP2-IT1-201ENST00000439185 RPS26P62854 115 aaKnown RBP7.58□□□□□ -1.2
UPP2-IT1-201ENST00000439185 THAP5Q7Z6K1 395 aa7.58□□□□□ -1.2
UPP2-IT1-201ENST00000439185 MAP3K11Q16584 847 aa7.57□□□□□ -1.2
UPP2-IT1-201ENST00000439185 SYDE1Q6ZW31 735 aaPredicted RBP7.57□□□□□ -1.2
UPP2-IT1-201ENST00000439185 AK5Q9Y6K8 562 aa7.57□□□□□ -1.2
UPP2-IT1-201ENST00000439185 PRPF40AO75400 957 aaKnown RBP7.56□□□□□ -1.2
UPP2-IT1-201ENST00000439185 TNK2Q07912 1038 aa7.56□□□□□ -1.2
UPP2-IT1-201ENST00000439185 AGMOQ6ZNB7 445 aa7.56□□□□□ -1.2
UPP2-IT1-201ENST00000439185 CILP2Q8IUL8 1156 aa7.56□□□□□ -1.2
UPP2-IT1-201ENST00000439185 CCDC120Q96HB5 630 aa7.56□□□□□ -1.2
UPP2-IT1-201ENST00000439185 ALPK1Q96QP1 1244 aa7.56□□□□□ -1.2
UPP2-IT1-201ENST00000439185 DPH2Q9BQC3 489 aaPredicted RBP7.56□□□□□ -1.2
UPP2-IT1-201ENST00000439185 RNF19AQ9NV58 838 aa7.56□□□□□ -1.2
UPP2-IT1-201ENST00000439185 SLAMF8Q9P0V8 285 aa7.56□□□□□ -1.2
UPP2-IT1-201ENST00000439185 TJP2Q9UDY2 1190 aa7.56□□□□□ -1.2
UPP2-IT1-201ENST00000439185 TACC3Q9Y6A5 838 aa7.56□□□□□ -1.2
UPP2-IT1-201ENST00000439185 PGRP06401 933 aa7.55□□□□□ -1.2
UPP2-IT1-201ENST00000439185 KIR3DL1P43629 444 aa7.55□□□□□ -1.2
UPP2-IT1-201ENST00000439185 LIG3P49916 1009 aa7.55□□□□□ -1.2
UPP2-IT1-201ENST00000439185 LCE4AQ5TA78 99 aa7.55□□□□□ -1.2
UPP2-IT1-201ENST00000439185 MRPL41Q8IXM3 137 aaKnown RBP7.55□□□□□ -1.2
UPP2-IT1-201ENST00000439185 COX4I2Q96KJ9 171 aa7.55□□□□□ -1.2
UPP2-IT1-201ENST00000439185 PPP1R16BQ96T49 567 aa7.55□□□□□ -1.2
UPP2-IT1-201ENST00000439185 MIR1-1HGQ9H1L0 117 aa7.55□□□□□ -1.2
UPP2-IT1-201ENST00000439185 TSPAN15O95858 294 aa7.54□□□□□ -1.2
UPP2-IT1-201ENST00000439185 SLC6A19Q695T7 634 aa7.54□□□□□ -1.2
UPP2-IT1-201ENST00000439185 TTC6Q86TZ1 520 aa7.54□□□□□ -1.2
UPP2-IT1-201ENST00000439185 TMEM87BQ96K49 555 aa7.54□□□□□ -1.2
UPP2-IT1-201ENST00000439185 TOX2Q96NM4 488 aa7.54□□□□□ -1.2
UPP2-IT1-201ENST00000439185 DIRC2Q96SL1 478 aa7.54□□□□□ -1.2
UPP2-IT1-201ENST00000439185 DUSP9Q99956 384 aaKnown RBP7.54□□□□□ -1.2
UPP2-IT1-201ENST00000439185 TIMELESSQ9UNS1 1208 aa7.54□□□□□ -1.2
UPP2-IT1-201ENST00000439185 WASH4PA8MWX3 477 aa7.53□□□□□ -1.2
UPP2-IT1-201ENST00000439185 CFPP27918 469 aa7.53□□□□□ -1.2
UPP2-IT1-201ENST00000439185 KRTAP19-4Q3LI73 84 aa7.53□□□□□ -1.2
UPP2-IT1-201ENST00000439185 NSUN3Q9H649 340 aaKnown RBP7.53□□□□□ -1.2
UPP2-IT1-201ENST00000439185 DNAJC25-GNG10A0A024R161 153 aa7.52□□□□□ -1.21
UPP2-IT1-201ENST00000439185 ESR1P03372 595 aa7.52□□□□□ -1.21
UPP2-IT1-201ENST00000439185 TFE3P19532 575 aaPredicted RBP7.52□□□□□ -1.21
UPP2-IT1-201ENST00000439185 ETV3P41162 512 aa7.52□□□□□ -1.21
UPP2-IT1-201ENST00000439185 PDE4BQ07343 736 aa7.52□□□□□ -1.21
UPP2-IT1-201ENST00000439185 TSNAXIP1Q2TAA8 658 aa7.52□□□□□ -1.21
UPP2-IT1-201ENST00000439185 RALGPS1Q5JS13 557 aa7.52□□□□□ -1.21
UPP2-IT1-201ENST00000439185 MEI1Q5TIA1 1274 aa7.52□□□□□ -1.21
UPP2-IT1-201ENST00000439185 TMPRSS7Q7RTY8 843 aa7.52□□□□□ -1.21
UPP2-IT1-201ENST00000439185 ANKLE2Q86XL3 938 aa7.52□□□□□ -1.21
UPP2-IT1-201ENST00000439185 ABHD4Q8TB40 342 aa7.52□□□□□ -1.21
UPP2-IT1-201ENST00000439185 PIWIL2Q8TC59 973 aaKnown RBP7.52□□□□□ -1.21
UPP2-IT1-201ENST00000439185 JARID2Q92833 1246 aaPredicted RBP7.52□□□□□ -1.21
UPP2-IT1-201ENST00000439185 C1QTNF9P0C862 333 aa7.51□□□□□ -1.21
UPP2-IT1-201ENST00000439185 RAC2P15153 192 aa7.51□□□□□ -1.21
UPP2-IT1-201ENST00000439185 HK2P52789 917 aa7.51□□□□□ -1.21
UPP2-IT1-201ENST00000439185 ERVFC1P60507 584 aa7.51□□□□□ -1.21
UPP2-IT1-201ENST00000439185 CREG2Q8IUH2 290 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms