RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 IGSF3O75054 1194 aa12.99□□□□□ -0.33
PTCH1-208ENST00000430669 PTPN12Q05209 780 aaKnown RBP12.99□□□□□ -0.33
PTCH1-208ENST00000430669 BICD1Q96G01 975 aa12.99□□□□□ -0.33
PTCH1-208ENST00000430669 CYP27B1O15528 508 aa12.99□□□□□ -0.33
PTCH1-208ENST00000430669 APBB1IPQ7Z5R6 666 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-208ENST00000430669 FOXP1Q9H334 677 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-208ENST00000430669 CNKSR1Q969H4 720 aa12.99□□□□□ -0.33
PTCH1-208ENST00000430669 TRMT1Q9NXH9 659 aaKnown RBP12.99□□□□□ -0.33
PTCH1-208ENST00000430669 GOLGA6L10A0A0M3HER8 536 aa12.99□□□□□ -0.33
PTCH1-208ENST00000430669 GRIPAP1Q4V328 841 aa12.99□□□□□ -0.33
PTCH1-208ENST00000430669 DIS3L2Q8IYB7 885 aaKnown RBP12.99□□□□□ -0.33
PTCH1-208ENST00000430669 TRIML1Q8N9V2 468 aa12.99□□□□□ -0.33
PTCH1-208ENST00000430669 V9GY48 417 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-208ENST00000430669 CEMIPQ8WUJ3 1361 aa12.99□□□□□ -0.33
PTCH1-208ENST00000430669 SLC1A4P43007 532 aa12.99□□□□□ -0.33
PTCH1-208ENST00000430669 EIF6P56537 245 aaKnown RBP12.99□□□□□ -0.33
PTCH1-208ENST00000430669 RBM6P78332 1123 aaKnown RBP12.99□□□□□ -0.33
PTCH1-208ENST00000430669 VWA3BQ502W6 1294 aa12.99□□□□□ -0.33
PTCH1-208ENST00000430669 KCNG1Q9UIX4 513 aa12.99□□□□□ -0.33
PTCH1-208ENST00000430669 SCN11AQ9UI33 1791 aa12.99□□□□□ -0.33
PTCH1-208ENST00000430669 CALUO43852 315 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-208ENST00000430669 PPFIA3O75145 1194 aa12.99□□□□□ -0.33
PTCH1-208ENST00000430669 NIM1KQ8IY84 436 aa12.99□□□□□ -0.33
PTCH1-208ENST00000430669 NT5C3AQ9H0P0 336 aa12.99□□□□□ -0.33
PTCH1-208ENST00000430669 COL15A1P39059 1388 aa12.99□□□□□ -0.33
PTCH1-208ENST00000430669 hCG_1984214I3L0E3 225 aa12.98□□□□□ -0.33
PTCH1-208ENST00000430669 ZNF713Q8N859 430 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-208ENST00000430669 TGFBRAP1Q8WUH2 860 aa12.98□□□□□ -0.33
PTCH1-208ENST00000430669 TRAPPC10P48553 1259 aa12.98□□□□□ -0.33
PTCH1-208ENST00000430669 BCAMP50895 628 aa12.98□□□□□ -0.33
PTCH1-208ENST00000430669 KRT40Q6A162 431 aa12.98□□□□□ -0.33
PTCH1-208ENST00000430669 M0R2C6 588 aa12.98□□□□□ -0.33
PTCH1-208ENST00000430669 KIAA0754O94854 1291 aa12.98□□□□□ -0.33
PTCH1-208ENST00000430669 PHKBQ93100 1093 aa12.98□□□□□ -0.33
PTCH1-208ENST00000430669 ZBTB1Q9Y2K1 713 aa12.98□□□□□ -0.33
PTCH1-208ENST00000430669 AKR1B15C9JRZ8 316 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-208ENST00000430669 GNA14O95837 355 aa12.98□□□□□ -0.33
PTCH1-208ENST00000430669 APBA3O96018 575 aa12.98□□□□□ -0.33
PTCH1-208ENST00000430669 GNG11P61952 73 aa12.98□□□□□ -0.33
PTCH1-208ENST00000430669 KIF5AQ12840 1032 aa12.98□□□□□ -0.33
PTCH1-208ENST00000430669 PIK3AP1Q6ZUJ8 805 aa12.98□□□□□ -0.33
PTCH1-208ENST00000430669 CPLX3Q8WVH0 158 aa12.98□□□□□ -0.33
PTCH1-208ENST00000430669 RNF26Q9BY78 433 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-208ENST00000430669 IFNKQ9P0W0 207 aa12.98□□□□□ -0.33
PTCH1-208ENST00000430669 LETM2Q2VYF4 491 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 SLC27A3Q5K4L6 730 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 JADE2Q9NQC1 790 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 EPB41P11171 864 aaKnown RBP12.97□□□□□ -0.33
PTCH1-208ENST00000430669 NONOQ15233 471 aaKnown RBP eCLIP12.97□□□□□ -0.33
PTCH1-208ENST00000430669 SLFN12Q8IYM2 578 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 ADORA1P30542 326 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 SPAG5Q96R06 1193 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 PLA2G12BQ9BX93 195 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 NDUFB9Q9Y6M9 179 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 PPEF1O14829 653 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-208ENST00000430669 ZNF174Q15697 407 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 GCOM1H8Y6P7 765 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-208ENST00000430669 MYZAPP0CAP1 466 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 PDIA3P30101 505 aaKnown RBP12.97□□□□□ -0.33
PTCH1-208ENST00000430669 SCRN1Q12765 414 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 FANCBQ8NB91 859 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 TMOD4Q9NZQ9 345 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 AKR1B10O60218 316 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 JAK2O60674 1132 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 ARID4AP29374 1257 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-208ENST00000430669 SMTNP53814 917 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 CCDC186Q7Z3E2 898 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 XRN1Q8IZH2 1706 aaKnown RBP12.97□□□□□ -0.33
PTCH1-208ENST00000430669 TACC1O75410 805 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 TRIM28Q13263 835 aaKnown RBP12.97□□□□□ -0.33
PTCH1-208ENST00000430669 CCDC102AQ96A19 550 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 JAG2Q9Y219 1238 aa12.97□□□□□ -0.33
PTCH1-208ENST00000430669 RBM10P98175 930 aaKnown RBP12.96□□□□□ -0.33
PTCH1-208ENST00000430669 TFAP4Q01664 338 aa12.96□□□□□ -0.33
PTCH1-208ENST00000430669 NCBP1Q09161 790 aaKnown RBP12.96□□□□□ -0.33
PTCH1-208ENST00000430669 PAK1Q13153 545 aa12.96□□□□□ -0.33
PTCH1-208ENST00000430669 MYSM1Q5VVJ2 828 aa12.96□□□□□ -0.33
PTCH1-208ENST00000430669 MTMR6Q9Y217 621 aa12.96□□□□□ -0.33
PTCH1-208ENST00000430669 GOLGA6L7A0A1B0GV03 622 aa12.96□□□□□ -0.33
PTCH1-208ENST00000430669 RCAN1P53805 252 aa12.96□□□□□ -0.33
PTCH1-208ENST00000430669 ASPRV1Q53RT3 343 aa12.96□□□□□ -0.33
PTCH1-208ENST00000430669 TTF2Q9UNY4 1162 aaKnown RBP12.96□□□□□ -0.33
PTCH1-208ENST00000430669 LUC7L2Q9Y383 392 aaKnown RBP12.96□□□□□ -0.33
PTCH1-208ENST00000430669 PHKA1P46020 1223 aa12.96□□□□□ -0.33
PTCH1-208ENST00000430669 DHX37Q8IY37 1157 aaKnown RBP12.96□□□□□ -0.33
PTCH1-208ENST00000430669 GPCPD1Q9NPB8 672 aa12.96□□□□□ -0.33
PTCH1-208ENST00000430669 POLR3EQ9NVU0 708 aa12.96□□□□□ -0.33
PTCH1-208ENST00000430669 AXIN2Q9Y2T1 843 aa12.96□□□□□ -0.33
PTCH1-208ENST00000430669 PPP6R2O75170 966 aa12.96□□□□□ -0.33
PTCH1-208ENST00000430669 SSR1P43307 286 aaKnown RBP12.96□□□□□ -0.33
PTCH1-208ENST00000430669 FERMT1Q9BQL6 677 aa12.96□□□□□ -0.33
PTCH1-208ENST00000430669 IMPG2Q9BZV3 1241 aa12.96□□□□□ -0.33
PTCH1-208ENST00000430669 RTEL1Q9NZ71 1219 aa12.96□□□□□ -0.34
PTCH1-208ENST00000430669 FMNL1O95466 1100 aaPredicted RBP12.96□□□□□ -0.34
PTCH1-208ENST00000430669 CCT6AP40227 531 aaKnown RBP12.96□□□□□ -0.34
PTCH1-208ENST00000430669 PALD1Q9ULE6 856 aa12.96□□□□□ -0.34
PTCH1-208ENST00000430669 FCHSD1Q86WN1 690 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 NUCKS1Q9H1E3 243 aaKnown RBP12.95□□□□□ -0.34
PTCH1-208ENST00000430669 ALDH8A1Q9H2A2 487 aaPredicted RBP12.95□□□□□ -0.34
PTCH1-208ENST00000430669 CTNND2Q9UQB3 1225 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms