RNA–Protein interactions for RNA: ENST00000430407.1

RCC1-209, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-209ENST00000430407 CAPN2P17655 700 aa21.38■■□□□ 1.01
RCC1-209ENST00000430407 FXR1P51114 621 aaKnown RBP eCLIP21.38■■□□□ 1.01
RCC1-209ENST00000430407 IRF5Q13568 498 aa21.38■■□□□ 1.01
RCC1-209ENST00000430407 MAPKAPK5Q8IW41 473 aa21.38■■□□□ 1.01
RCC1-209ENST00000430407 MIGA1Q8NAN2 632 aa21.38■■□□□ 1.01
RCC1-209ENST00000430407 TRIM34Q9BYJ4 488 aa21.38■■□□□ 1.01
RCC1-209ENST00000430407 UNC93B1Q9H1C4 597 aa21.38■■□□□ 1.01
RCC1-209ENST00000430407 PAG1Q9NWQ8 432 aa21.38■■□□□ 1.01
RCC1-209ENST00000430407 HERC5Q9UII4 1024 aaKnown RBP21.38■■□□□ 1.01
RCC1-209ENST00000430407 USP17L5A8MUK1 530 aa21.37■■□□□ 1.01
RCC1-209ENST00000430407 SGPL1O95470 568 aa21.37■■□□□ 1.01
RCC1-209ENST00000430407 ELNP15502 786 aa21.37■■□□□ 1.01
RCC1-209ENST00000430407 CAP2P40123 477 aa21.37■■□□□ 1.01
RCC1-209ENST00000430407 FAM110CQ1W6H9 321 aa21.37■■□□□ 1.01
RCC1-209ENST00000430407 TREML2Q5T2D2 321 aa21.37■■□□□ 1.01
RCC1-209ENST00000430407 SLC9C2Q5TAH2 1124 aa21.37■■□□□ 1.01
RCC1-209ENST00000430407 HAUS7Q99871 368 aa21.37■■□□□ 1.01
RCC1-209ENST00000430407 NR2E3Q9Y5X4 410 aa21.37■■□□□ 1.01
RCC1-209ENST00000430407 FARP2O94887 1054 aaPredicted RBP21.36■■□□□ 1.01
RCC1-209ENST00000430407 TFRCP02786 760 aaKnown RBP21.36■■□□□ 1.01
RCC1-209ENST00000430407 INHAP05111 366 aa21.36■■□□□ 1.01
RCC1-209ENST00000430407 PDE6AP16499 860 aa21.36■■□□□ 1.01
RCC1-209ENST00000430407 USP5P45974 858 aa21.36■■□□□ 1.01
RCC1-209ENST00000430407 GCLCP48506 637 aaPredicted RBP21.36■■□□□ 1.01
RCC1-209ENST00000430407 HMGCS2P54868 508 aa21.36■■□□□ 1.01
RCC1-209ENST00000430407 AAMPQ13685 434 aa21.36■■□□□ 1.01
RCC1-209ENST00000430407 CHRDL2Q6WN34 429 aa21.36■■□□□ 1.01
RCC1-209ENST00000430407 GPATCH3Q96I76 525 aa21.36■■□□□ 1.01
RCC1-209ENST00000430407 ECHDC1Q9NTX5 307 aa21.36■■□□□ 1.01
RCC1-209ENST00000430407 FOXP4Q8IVH2 680 aaPredicted RBP21.35■■□□□ 1.01
RCC1-209ENST00000430407 EDC3Q96F86 508 aaKnown RBP21.35■■□□□ 1.01
RCC1-209ENST00000430407 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.35■■□□□ 1.01
RCC1-209ENST00000430407 MYO5AQ9Y4I1 1855 aaKnown RBP21.35■■□□□ 1.01
RCC1-209ENST00000430407 ZNF532Q9HCE3 1301 aa21.34■■□□□ 1.01
RCC1-209ENST00000430407 MAGEB6P1A0A0J9YX57 407 aa21.34■■□□□ 1.01
RCC1-209ENST00000430407 HLA-DOAP06340 250 aa21.34■■□□□ 1.01
RCC1-209ENST00000430407 CRACR2BQ8N4Y2 399 aaPredicted RBP21.34■■□□□ 1.01
RCC1-209ENST00000430407 RIOK1Q9BRS2 568 aaKnown RBP21.34■■□□□ 1.01
RCC1-209ENST00000430407 DOCK1Q14185 1865 aa21.34■■□□□ 1.01
RCC1-209ENST00000430407 METTL16Q86W50 562 aaKnown RBP21.33■■□□□ 1.01
RCC1-209ENST00000430407 DEFB118Q96PH6 123 aa21.33■■□□□ 1.01
RCC1-209ENST00000430407 TMOD4Q9NZQ9 345 aa21.33■■□□□ 1.01
RCC1-209ENST00000430407 PALD1Q9ULE6 856 aa21.33■■□□□ 1.01
RCC1-209ENST00000430407 TCRBV5S4A2TA0A5A2 114 aa21.32■■□□□ 1
RCC1-209ENST00000430407 ASNSP08243 561 aa21.32■■□□□ 1
RCC1-209ENST00000430407 IRX3P78415 501 aaPredicted RBP21.32■■□□□ 1
RCC1-209ENST00000430407 SH3D19Q5HYK7 790 aa21.32■■□□□ 1
RCC1-209ENST00000430407 UBE2Q1Q7Z7E8 422 aa21.32■■□□□ 1
RCC1-209ENST00000430407 ASCC2Q9H1I8 757 aaPredicted RBP21.32■■□□□ 1
RCC1-209ENST00000430407 SAP30BPQ9UHR5 308 aaKnown RBP21.32■■□□□ 1
RCC1-209ENST00000430407 ADD2P35612 726 aa21.31■■□□□ 1
RCC1-209ENST00000430407 ZSCAN25Q6NSZ9 544 aa21.31■■□□□ 1
RCC1-209ENST00000430407 CRNKL1Q9BZJ0 848 aaKnown RBP21.31■■□□□ 1
RCC1-209ENST00000430407 ZBTB47Q9UFB7 747 aaPredicted RBP21.31■■□□□ 1
RCC1-209ENST00000430407 EVI5O60447 810 aa21.3■■□□□ 1
RCC1-209ENST00000430407 HDAC1Q13547 482 aaPredicted RBP21.3■■□□□ 1
RCC1-209ENST00000430407 MTMR2Q13614 643 aa21.3■■□□□ 1
RCC1-209ENST00000430407 TTC6Q86TZ1 520 aa21.3■■□□□ 1
RCC1-209ENST00000430407 WDR18Q9BV38 432 aa21.3■■□□□ 1
RCC1-209ENST00000430407 CENPFP49454 3210 aa21.3■■□□□ 1
RCC1-209ENST00000430407 C19orf81C9J6K1 198 aa21.29■■□□□ 1
RCC1-209ENST00000430407 BACE1P56817 501 aa21.29■■□□□ 1
RCC1-209ENST00000430407 RRP1BQ14684 758 aaKnown RBP21.29■■□□□ 1
RCC1-209ENST00000430407 UBE3CQ15386 1083 aa21.29■■□□□ 1
RCC1-209ENST00000430407 PAK6Q9NQU5 681 aaPredicted RBP21.29■■□□□ 1
RCC1-209ENST00000430407 GINM1Q9NU53 330 aa21.29■■□□□ 1
RCC1-209ENST00000430407 RBM27Q9P2N5 1060 aaKnown RBP21.29■■□□□ 1
RCC1-209ENST00000430407 TTC41PQ6P2S7 1318 aa21.29■■□□□ 1
RCC1-209ENST00000430407 HMGCRP04035 888 aa21.28■■□□□ 1
RCC1-209ENST00000430407 CCAR1Q8IX12 1150 aaKnown RBP21.28■■□□□ 1
RCC1-209ENST00000430407 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.28■■□□□ 12e-7■■□□□ 11.6
RCC1-209ENST00000430407 EHD4Q9H223 541 aa21.28■■□□□ 1
RCC1-209ENST00000430407 DNAJC18Q9H819 358 aa21.28■■□□□ 1
RCC1-209ENST00000430407 USP17L10C9JJH3 530 aa21.27■■□□□ 1
RCC1-209ENST00000430407 ERC2O15083 957 aa21.27■■□□□ 1
RCC1-209ENST00000430407 SERPINB13Q9UIV8 391 aa21.27■■□□□ 1
RCC1-209ENST00000430407 FOCADQ5VW36 1801 aa21.27■□□□□ 0.99
RCC1-209ENST00000430407 MGAMO43451 1857 aa21.26■□□□□ 0.99
RCC1-209ENST00000430407 MKI67P46013 3256 aaKnown RBP21.26■□□□□ 0.99
RCC1-209ENST00000430407 GDF11O95390 407 aa21.26■□□□□ 0.99
RCC1-209ENST00000430407 POLR3DP05423 398 aaPredicted RBP21.26■□□□□ 0.99
RCC1-209ENST00000430407 ANKRD45Q5TZF3 282 aa21.26■□□□□ 0.99
RCC1-209ENST00000430407 NECAB2Q7Z6G3 386 aa21.26■□□□□ 0.99
RCC1-209ENST00000430407 LCORLQ8N3X6 602 aa21.26■□□□□ 0.99
RCC1-209ENST00000430407 KBTBD3Q8NAB2 608 aa21.26■□□□□ 0.99
RCC1-209ENST00000430407 HMX1Q9NP08 348 aaPredicted RBP21.26■□□□□ 0.99
RCC1-209ENST00000430407 MORF4L1Q9UBU8 362 aa21.26■□□□□ 0.99
RCC1-209ENST00000430407 PHIPQ8WWQ0 1821 aa21.25■□□□□ 0.99
RCC1-209ENST00000430407 GLRX3O76003 335 aaKnown RBP21.25■□□□□ 0.99
RCC1-209ENST00000430407 MBD4O95243 580 aa21.25■□□□□ 0.99
RCC1-209ENST00000430407 HOXA7P31268 230 aaPredicted RBP21.25■□□□□ 0.99
RCC1-209ENST00000430407 TSHZ3Q63HK5 1081 aa21.25■□□□□ 0.99
RCC1-209ENST00000430407 GPRC5AQ8NFJ5 357 aa21.25■□□□□ 0.99
RCC1-209ENST00000430407 PAWRQ96IZ0 340 aaKnown RBP21.25■□□□□ 0.99
RCC1-209ENST00000430407 CDK5RAP2Q96SN8 1893 aa21.25■□□□□ 0.99
RCC1-209ENST00000430407 CRISPLD2Q9H0B8 497 aa21.25■□□□□ 0.99
RCC1-209ENST00000430407 ARMT1Q9H993 441 aa21.25■□□□□ 0.99
RCC1-209ENST00000430407 SUPT16HQ9Y5B9 1047 aaKnown RBP21.25■□□□□ 0.99
RCC1-209ENST00000430407 RPTORQ8N122 1335 aa21.25■□□□□ 0.99
RCC1-209ENST00000430407 BRCA2P51587 3418 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms