RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 RPAP2Q8IXW5 612 aaPredicted RBP14.61□□□□□ -0.07
TTC3-208ENST00000428693 SLAIN1Q8ND83 568 aa14.61□□□□□ -0.07
TTC3-208ENST00000428693 KIF1BPQ96EK5 621 aa14.61□□□□□ -0.07
TTC3-208ENST00000428693 FEZ1Q99689 392 aa14.61□□□□□ -0.07
TTC3-208ENST00000428693 ASCC2Q9H1I8 757 aaPredicted RBP14.61□□□□□ -0.07
TTC3-208ENST00000428693 MAGEB6P1A0A0J9YX57 407 aa14.6□□□□□ -0.07
TTC3-208ENST00000428693 GOLIM4O00461 696 aa14.6□□□□□ -0.07
TTC3-208ENST00000428693 POLR3DP05423 398 aaPredicted RBP14.6□□□□□ -0.07
TTC3-208ENST00000428693 JAG1P78504 1218 aa14.6□□□□□ -0.07
TTC3-208ENST00000428693 TTF1Q15361 905 aaPredicted RBP14.6□□□□□ -0.07
TTC3-208ENST00000428693 SLC9C2Q5TAH2 1124 aa14.6□□□□□ -0.07
TTC3-208ENST00000428693 CCAR1Q8IX12 1150 aaKnown RBP14.6□□□□□ -0.07
TTC3-208ENST00000428693 NKX2-3Q8TAU0 364 aa14.6□□□□□ -0.07
TTC3-208ENST00000428693 DPF3Q92784 378 aa14.6□□□□□ -0.07
TTC3-208ENST00000428693 UNC93B1Q9H1C4 597 aa14.6□□□□□ -0.07
TTC3-208ENST00000428693 CHMP4BQ9H444 224 aaKnown RBP14.6□□□□□ -0.07
TTC3-208ENST00000428693 DNAJC18Q9H819 358 aa14.6□□□□□ -0.07
TTC3-208ENST00000428693 ZBTB21Q9ULJ3 1066 aa14.6□□□□□ -0.07
TTC3-208ENST00000428693 CDK5RAP2Q96SN8 1893 aa14.6□□□□□ -0.07
TTC3-208ENST00000428693 MYH1P12882 1939 aa14.59□□□□□ -0.07
TTC3-208ENST00000428693 USP17L10C9JJH3 530 aa14.59□□□□□ -0.07
TTC3-208ENST00000428693 IGSF3O75054 1194 aa14.59□□□□□ -0.07
TTC3-208ENST00000428693 GH2P01242 217 aa14.59□□□□□ -0.07
TTC3-208ENST00000428693 INHAP05111 366 aa14.59□□□□□ -0.07
TTC3-208ENST00000428693 GCLCP48506 637 aaPredicted RBP14.59□□□□□ -0.07
TTC3-208ENST00000428693 BACE1P56817 501 aa14.59□□□□□ -0.07
TTC3-208ENST00000428693 RAB3GAP1Q15042 981 aa14.59□□□□□ -0.07
TTC3-208ENST00000428693 FAM110CQ1W6H9 321 aa14.59□□□□□ -0.07
TTC3-208ENST00000428693 TTC6Q86TZ1 520 aa14.59□□□□□ -0.07
TTC3-208ENST00000428693 CERS3Q8IU89 383 aa14.59□□□□□ -0.07
TTC3-208ENST00000428693 GCC1Q96CN9 775 aa14.59□□□□□ -0.07
TTC3-208ENST00000428693 WDR18Q9BV38 432 aa14.59□□□□□ -0.07
TTC3-208ENST00000428693 C19orf81C9J6K1 198 aa14.58□□□□□ -0.08
TTC3-208ENST00000428693 TFRCP02786 760 aaKnown RBP14.58□□□□□ -0.08
TTC3-208ENST00000428693 SH3D19Q5HYK7 790 aa14.58□□□□□ -0.08
TTC3-208ENST00000428693 PAGR1Q9BTK6 254 aa14.58□□□□□ -0.08
TTC3-208ENST00000428693 CWC22Q9HCG8 908 aaKnown RBP14.58□□□□□ -0.08
TTC3-208ENST00000428693 ZBTB40Q9NUA8 1239 aa14.58□□□□□ -0.08
TTC3-208ENST00000428693 SERPINB13Q9UIV8 391 aa14.58□□□□□ -0.08
TTC3-208ENST00000428693 SIPA1L1O43166 1804 aa14.57□□□□□ -0.08
TTC3-208ENST00000428693 FOCADQ5VW36 1801 aa14.57□□□□□ -0.08
TTC3-208ENST00000428693 MPHOSPH10O00566 681 aaKnown RBP14.57□□□□□ -0.08
TTC3-208ENST00000428693 PEX10O60683 326 aa14.57□□□□□ -0.08
TTC3-208ENST00000428693 RAB11FIP3O75154 756 aa14.57□□□□□ -0.08
TTC3-208ENST00000428693 GJB1P08034 283 aa14.57□□□□□ -0.08
TTC3-208ENST00000428693 PDE6AP16499 860 aa14.57□□□□□ -0.08
TTC3-208ENST00000428693 CERKLQ49MI3 558 aaPredicted RBP14.57□□□□□ -0.08
TTC3-208ENST00000428693 SIRT2Q8IXJ6 389 aa14.57□□□□□ -0.08
TTC3-208ENST00000428693 EDC3Q96F86 508 aaKnown RBP14.57□□□□□ -0.08
TTC3-208ENST00000428693 P2RX7Q99572 595 aaKnown RBP14.57□□□□□ -0.08
TTC3-208ENST00000428693 CRNKL1Q9BZJ0 848 aaKnown RBP14.57□□□□□ -0.08
TTC3-208ENST00000428693 BOLA2Q9H3K6 86 aa14.57□□□□□ -0.08
TTC3-208ENST00000428693 CABP5Q9NP86 173 aa14.57□□□□□ -0.08
TTC3-208ENST00000428693 DOCK3Q8IZD9 2030 aa14.57□□□□□ -0.08
TTC3-208ENST00000428693 ZNF532Q9HCE3 1301 aa14.57□□□□□ -0.08
TTC3-208ENST00000428693 CEP290O15078 2479 aa14.56□□□□□ -0.08
TTC3-208ENST00000428693 LOC285556D6RIA3 1793 aa14.56□□□□□ -0.08
TTC3-208ENST00000428693 GJA8P48165 433 aa14.56□□□□□ -0.08
TTC3-208ENST00000428693 ABCB5Q2M3G0 1257 aa14.56□□□□□ -0.08
TTC3-208ENST00000428693 C20orf194Q5TEA3 1177 aa14.56□□□□□ -0.08
TTC3-208ENST00000428693 USP17L2Q6R6M4 530 aa14.56□□□□□ -0.08
TTC3-208ENST00000428693 METTL16Q86W50 562 aaKnown RBP14.56□□□□□ -0.08
TTC3-208ENST00000428693 GPRC5AQ8NFJ5 357 aa14.56□□□□□ -0.08
TTC3-208ENST00000428693 U2AF1L4Q8WU68 220 aaKnown RBP14.56□□□□□ -0.08
TTC3-208ENST00000428693 SHISA4Q96DD7 197 aa14.56□□□□□ -0.08
TTC3-208ENST00000428693 DEFB118Q96PH6 123 aa14.56□□□□□ -0.08
TTC3-208ENST00000428693 GINM1Q9NU53 330 aa14.56□□□□□ -0.08
TTC3-208ENST00000428693 RNF216Q9NWF9 866 aaPredicted RBP14.56□□□□□ -0.08
TTC3-208ENST00000428693 MCM9Q9NXL9 1143 aa14.56□□□□□ -0.08
TTC3-208ENST00000428693 CYP2B6P20813 491 aa14.55□□□□□ -0.08
TTC3-208ENST00000428693 PLCD1P51178 756 aa14.55□□□□□ -0.08
TTC3-208ENST00000428693 HERVK_113P62684 666 aa14.55□□□□□ -0.08
TTC3-208ENST00000428693 IRF5Q13568 498 aa14.55□□□□□ -0.08
TTC3-208ENST00000428693 WDR78Q5VTH9 848 aa14.55□□□□□ -0.08
TTC3-208ENST00000428693 PXYLP1Q8TE99 480 aa14.55□□□□□ -0.08
TTC3-208ENST00000428693 SDR42E1Q8WUS8 393 aa14.55□□□□□ -0.08
TTC3-208ENST00000428693 PAG1Q9NWQ8 432 aa14.55□□□□□ -0.08
TTC3-208ENST00000428693 H0YGN5 161 aa14.54□□□□□ -0.08
TTC3-208ENST00000428693 SMARCA5O60264 1052 aaPredicted RBP14.54□□□□□ -0.08
TTC3-208ENST00000428693 FARP2O94887 1054 aaPredicted RBP14.54□□□□□ -0.08
TTC3-208ENST00000428693 SGPL1O95470 568 aa14.54□□□□□ -0.08
TTC3-208ENST00000428693 PDE3AQ14432 1141 aa14.54□□□□□ -0.08
TTC3-208ENST00000428693 HABP4Q5JVS0 413 aaKnown RBP14.54□□□□□ -0.08
TTC3-208ENST00000428693 TATDN1Q6P1N9 297 aa14.54□□□□□ -0.08
TTC3-208ENST00000428693 TMED8Q6PL24 325 aaPredicted RBP14.54□□□□□ -0.08
TTC3-208ENST00000428693 LCORLQ8N3X6 602 aa14.54□□□□□ -0.08
TTC3-208ENST00000428693 RIOK1Q9BRS2 568 aaKnown RBP14.54□□□□□ -0.08
TTC3-208ENST00000428693 HTATIP2Q9BUP3 242 aa14.54□□□□□ -0.08
TTC3-208ENST00000428693 ARMT1Q9H993 441 aa14.54□□□□□ -0.08
TTC3-208ENST00000428693 EMILIN3Q9NT22 766 aa14.54□□□□□ -0.08
TTC3-208ENST00000428693 HOXA7P31268 230 aaPredicted RBP14.53□□□□□ -0.08
TTC3-208ENST00000428693 SLFNL1Q499Z3 407 aa14.53□□□□□ -0.08
TTC3-208ENST00000428693 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.53□□□□□ -0.08
TTC3-208ENST00000428693 LRRCC1Q9C099 1032 aa14.53□□□□□ -0.08
TTC3-208ENST00000428693 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.53□□□□□ -0.089e-6■□□□□ 8.3
TTC3-208ENST00000428693 EHD4Q9H223 541 aa14.53□□□□□ -0.08
TTC3-208ENST00000428693 TXNRD2Q9NNW7 524 aa14.53□□□□□ -0.08
TTC3-208ENST00000428693 USP17L15C9J2P7 530 aa14.52□□□□□ -0.09
TTC3-208ENST00000428693 USP17L13C9JLJ4 530 aa14.52□□□□□ -0.09
TTC3-208ENST00000428693 USP17L11C9JVI0 530 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms