RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 HHIPL2Q6UWX4 724 aa30.94■■■□□ 2.54
SH3GL3-202ENST00000427482 ZNF396Q96N95 335 aaPredicted RBP30.94■■■□□ 2.54
SH3GL3-202ENST00000427482 KCNQ5Q9NR82 932 aa30.94■■■□□ 2.54
SH3GL3-202ENST00000427482 KIAA2012Q0VF49 1180 aa30.93■■■□□ 2.54
SH3GL3-202ENST00000427482 TROAPQ12815 778 aa30.93■■■□□ 2.54
SH3GL3-202ENST00000427482 TRIM22Q8IYM9 498 aa30.93■■■□□ 2.54
SH3GL3-202ENST00000427482 CRACR2BQ8N4Y2 399 aaPredicted RBP30.93■■■□□ 2.54
SH3GL3-202ENST00000427482 WASF1Q92558 559 aa30.93■■■□□ 2.54
SH3GL3-202ENST00000427482 MKNK2Q9HBH9 465 aa30.93■■■□□ 2.54
SH3GL3-202ENST00000427482 MRE11P49959 708 aa30.92■■■□□ 2.54
SH3GL3-202ENST00000427482 TFAP4Q01664 338 aa30.92■■■□□ 2.54
SH3GL3-202ENST00000427482 BRAPQ7Z569 592 aa30.92■■■□□ 2.54
SH3GL3-202ENST00000427482 KIF23Q02241 960 aaPredicted RBP30.91■■■□□ 2.54
SH3GL3-202ENST00000427482 AOC3Q16853 763 aa30.91■■■□□ 2.54
SH3GL3-202ENST00000427482 GRIPAP1Q4V328 841 aa30.91■■■□□ 2.54
SH3GL3-202ENST00000427482 DACT2Q5SW24 774 aa30.91■■■□□ 2.54
SH3GL3-202ENST00000427482 KRT40Q6A162 431 aa30.91■■■□□ 2.54
SH3GL3-202ENST00000427482 C16orf86Q6ZW13 317 aa30.91■■■□□ 2.54
SH3GL3-202ENST00000427482 TTLL6Q8N841 843 aa30.91■■■□□ 2.54
SH3GL3-202ENST00000427482 RBM28Q9NW13 759 aaKnown RBP30.91■■■□□ 2.54
SH3GL3-202ENST00000427482 C21orf2O43822 256 aa30.91■■■□□ 2.54
SH3GL3-202ENST00000427482 SCNN1DP51172 638 aa30.91■■■□□ 2.54
SH3GL3-202ENST00000427482 RCSD1Q6JBY9 416 aa30.91■■■□□ 2.54
SH3GL3-202ENST00000427482 SLC44A5Q8NCS7 719 aa30.91■■■□□ 2.54
SH3GL3-202ENST00000427482 TEKT1Q969V4 418 aa30.91■■■□□ 2.54
SH3GL3-202ENST00000427482 GRPEL1Q9HAV7 217 aa30.91■■■□□ 2.54
SH3GL3-202ENST00000427482 ZNF287Q9HBT7 754 aa30.91■■■□□ 2.54
SH3GL3-202ENST00000427482 MYH8P13535 1937 aa30.91■■■□□ 2.54
SH3GL3-202ENST00000427482 TPRNQ4KMQ1 711 aa30.9■■■□□ 2.54
SH3GL3-202ENST00000427482 USP28Q96RU2 1077 aa30.9■■■□□ 2.54
SH3GL3-202ENST00000427482 SYCE3A1L190 88 aa30.89■■■□□ 2.54
SH3GL3-202ENST00000427482 UBE2Q2LH0YL09 131 aa30.89■■■□□ 2.54
SH3GL3-202ENST00000427482 RASA1P20936 1047 aa30.89■■■□□ 2.54
SH3GL3-202ENST00000427482 CCDC183Q5T5S1 534 aa30.89■■■□□ 2.54
SH3GL3-202ENST00000427482 TCP11L1Q9NUJ3 509 aa30.89■■■□□ 2.54
SH3GL3-202ENST00000427482 KIF28PB7ZC32 967 aa30.89■■■□□ 2.53
SH3GL3-202ENST00000427482 DEXIO95424 95 aa30.89■■■□□ 2.53
SH3GL3-202ENST00000427482 CCDC178Q5BJE1 867 aa30.89■■■□□ 2.53
SH3GL3-202ENST00000427482 DGKHQ86XP1 1220 aa30.89■■■□□ 2.53
SH3GL3-202ENST00000427482 ZNF444Q8N0Y2 327 aaPredicted RBP30.89■■■□□ 2.53
SH3GL3-202ENST00000427482 ANKS1AQ92625 1134 aa30.89■■■□□ 2.53
SH3GL3-202ENST00000427482 IL17RBQ9NRM6 502 aa30.89■■■□□ 2.53
SH3GL3-202ENST00000427482 RCOR1Q9UKL0 485 aa30.89■■■□□ 2.53
SH3GL3-202ENST00000427482 USP17L3A6NCW0 530 aa30.88■■■□□ 2.53
SH3GL3-202ENST00000427482 USP17L4A6NCW7 530 aa30.88■■■□□ 2.53
SH3GL3-202ENST00000427482 WDHD1O75717 1129 aaPredicted RBP30.88■■■□□ 2.53
SH3GL3-202ENST00000427482 DPEP1P16444 411 aa30.88■■■□□ 2.53
SH3GL3-202ENST00000427482 KCNA3P22001 575 aa30.88■■■□□ 2.53
SH3GL3-202ENST00000427482 TRIM29Q14134 588 aa30.88■■■□□ 2.53
SH3GL3-202ENST00000427482 USP17L1Q7RTZ2 530 aa30.88■■■□□ 2.53
SH3GL3-202ENST00000427482 CMTR1Q8N1G2 835 aaKnown RBP30.88■■■□□ 2.53
SH3GL3-202ENST00000427482 MRIQ9BWK5 157 aa30.88■■■□□ 2.53
SH3GL3-202ENST00000427482 RNF26Q9BY78 433 aaPredicted RBP30.88■■■□□ 2.53
SH3GL3-202ENST00000427482 XRCC6P12956 609 aaKnown RBP eCLIP30.87■■■□□ 2.53
SH3GL3-202ENST00000427482 GUCY1A2P33402 732 aa30.87■■■□□ 2.53
SH3GL3-202ENST00000427482 CRKP46108 304 aa30.87■■■□□ 2.53
SH3GL3-202ENST00000427482 CDK8P49336 464 aa30.87■■■□□ 2.53
SH3GL3-202ENST00000427482 CCDC93Q567U6 631 aa30.87■■■□□ 2.53
SH3GL3-202ENST00000427482 LRSAM1Q6UWE0 723 aa30.87■■■□□ 2.53
SH3GL3-202ENST00000427482 FTOQ9C0B1 505 aaKnown RBP eCLIP30.87■■■□□ 2.53
SH3GL3-202ENST00000427482 USP40Q9NVE5 1235 aa30.87■■■□□ 2.53
SH3GL3-202ENST00000427482 TSPY3P0CV98 308 aa30.87■■■□□ 2.53
SH3GL3-202ENST00000427482 TSPY8P0CW00 308 aa30.87■■■□□ 2.53
SH3GL3-202ENST00000427482 FUT2Q10981 343 aa30.87■■■□□ 2.53
SH3GL3-202ENST00000427482 APOBEC3HQ6NTF7 200 aaKnown RBP30.87■■■□□ 2.53
SH3GL3-202ENST00000427482 PGBD1Q96JS3 809 aa30.87■■■□□ 2.53
SH3GL3-202ENST00000427482 CEBPZQ03701 1054 aaKnown RBP30.86■■■□□ 2.53
SH3GL3-202ENST00000427482 MYSM1Q5VVJ2 828 aa30.86■■■□□ 2.53
SH3GL3-202ENST00000427482 CCDC82Q8N4S0 544 aa30.86■■■□□ 2.53
SH3GL3-202ENST00000427482 GOLGA6L4A6NEF3 574 aa30.85■■■□□ 2.53
SH3GL3-202ENST00000427482 PPIP5K2O43314 1243 aa30.85■■■□□ 2.53
SH3GL3-202ENST00000427482 HDLBPQ00341 1268 aaKnown RBP30.85■■■□□ 2.53
SH3GL3-202ENST00000427482 PICALMQ13492 652 aa30.85■■■□□ 2.53
SH3GL3-202ENST00000427482 CDC42EP5Q6NZY7 148 aa30.85■■■□□ 2.53
SH3GL3-202ENST00000427482 RTKN2Q8IZC4 609 aa30.85■■■□□ 2.53
SH3GL3-202ENST00000427482 ZDHHC15Q96MV8 337 aa30.85■■■□□ 2.53
SH3GL3-202ENST00000427482 DDX4Q9NQI0 724 aaKnown RBP30.85■■■□□ 2.53
SH3GL3-202ENST00000427482 TMTC3Q6ZXV5 915 aa30.84■■■□□ 2.53
SH3GL3-202ENST00000427482 KIAA0825Q8IV33 1275 aa30.84■■■□□ 2.53
SH3GL3-202ENST00000427482 CTCFLQ8NI51 663 aaPredicted RBP30.84■■■□□ 2.53
SH3GL3-202ENST00000427482 RTEL1Q9NZ71 1219 aa30.84■■■□□ 2.53
SH3GL3-202ENST00000427482 PLEKHA8P1O95397 391 aa30.84■■■□□ 2.53
SH3GL3-202ENST00000427482 PSMD1Q99460 953 aa30.84■■■□□ 2.53
SH3GL3-202ENST00000427482 KAT14Q9H8E8 782 aa30.84■■■□□ 2.53
SH3GL3-202ENST00000427482 PRPF3O43395 683 aaKnown RBP30.82■■■□□ 2.52
SH3GL3-202ENST00000427482 LIG1P18858 919 aa30.82■■■□□ 2.52
SH3GL3-202ENST00000427482 U2AF2P26368 475 aaKnown RBP eCLIP30.82■■■□□ 2.52
SH3GL3-202ENST00000427482 MAP3K14Q99558 947 aa30.82■■■□□ 2.52
SH3GL3-202ENST00000427482 POLR3EQ9NVU0 708 aa30.82■■■□□ 2.52
SH3GL3-202ENST00000427482 YDJCA8MPS7 323 aa30.81■■■□□ 2.52
SH3GL3-202ENST00000427482 LETM1O95202 739 aaPredicted RBP30.81■■■□□ 2.52
SH3GL3-202ENST00000427482 AKAP17AQ02040 695 aaKnown RBP30.81■■■□□ 2.52
SH3GL3-202ENST00000427482 NEDD1Q8NHV4 660 aa30.81■■■□□ 2.52
SH3GL3-202ENST00000427482 BRCA1P38398 1863 aaKnown RBP30.81■■■□□ 2.52
SH3GL3-202ENST00000427482 CNTNAP5Q8WYK1 1306 aa30.8■■■□□ 2.52
SH3GL3-202ENST00000427482 ZBTB7AO95365 584 aa30.8■■■□□ 2.52
SH3GL3-202ENST00000427482 MMP1P03956 469 aa30.8■■■□□ 2.52
SH3GL3-202ENST00000427482 GABPAQ06546 454 aa30.8■■■□□ 2.52
SH3GL3-202ENST00000427482 PNMA1Q8ND90 353 aa30.8■■■□□ 2.52
SH3GL3-202ENST00000427482 OSBPL5Q9H0X9 879 aaPredicted RBP30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms