RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 RNF208Q9H0X6 261 aa21.62■■□□□ 1.05
GPC1-203ENST00000425056 SAP30BPQ9UHR5 308 aaKnown RBP21.62■■□□□ 1.05
GPC1-203ENST00000425056 ZBTB21Q9ULJ3 1066 aa21.62■■□□□ 1.05
GPC1-203ENST00000425056 GDF11O95390 407 aa21.61■■□□□ 1.05
GPC1-203ENST00000425056 MAP3K12Q12852 859 aa21.61■■□□□ 1.05
GPC1-203ENST00000425056 SHROOM1Q2M3G4 852 aaPredicted RBP21.61■■□□□ 1.05
GPC1-203ENST00000425056 UBE2Q1Q7Z7E8 422 aa21.61■■□□□ 1.05
GPC1-203ENST00000425056 RHPN1Q8TCX5 695 aa21.61■■□□□ 1.05
GPC1-203ENST00000425056 COA7Q96BR5 231 aa21.61■■□□□ 1.05
GPC1-203ENST00000425056 NAV1Q8NEY1 1877 aa21.6■■□□□ 1.05
GPC1-203ENST00000425056 INHAP05111 366 aa21.6■■□□□ 1.05
GPC1-203ENST00000425056 ELNP15502 786 aa21.6■■□□□ 1.05
GPC1-203ENST00000425056 UNC93B1Q9H1C4 597 aa21.6■■□□□ 1.05
GPC1-203ENST00000425056 IL1RAPL2Q9NP60 686 aa21.6■■□□□ 1.05
GPC1-203ENST00000425056 C19orf81C9J6K1 198 aa21.59■■□□□ 1.05
GPC1-203ENST00000425056 HOXA7P31268 230 aaPredicted RBP21.59■■□□□ 1.05
GPC1-203ENST00000425056 USP5P45974 858 aa21.59■■□□□ 1.05
GPC1-203ENST00000425056 HABP4Q5JVS0 413 aaKnown RBP21.59■■□□□ 1.05
GPC1-203ENST00000425056 RPAP2Q8IXW5 612 aaPredicted RBP21.59■■□□□ 1.05
GPC1-203ENST00000425056 EHD4Q9H223 541 aa21.59■■□□□ 1.05
GPC1-203ENST00000425056 TMOD4Q9NZQ9 345 aa21.59■■□□□ 1.05
GPC1-203ENST00000425056 MORF4L1Q9UBU8 362 aa21.59■■□□□ 1.05
GPC1-203ENST00000425056 DDX19BQ9UMR2 479 aa21.59■■□□□ 1.05
GPC1-203ENST00000425056 PLXNB2O15031 1838 aa21.59■■□□□ 1.05
GPC1-203ENST00000425056 CEP290O15078 2479 aa21.58■■□□□ 1.05
GPC1-203ENST00000425056 USP17L10C9JJH3 530 aa21.58■■□□□ 1.05
GPC1-203ENST00000425056 IRX3P78415 501 aaPredicted RBP21.58■■□□□ 1.05
GPC1-203ENST00000425056 U2AF1L4Q8WU68 220 aaKnown RBP21.58■■□□□ 1.05
GPC1-203ENST00000425056 KIF1BPQ96EK5 621 aa21.58■■□□□ 1.05
GPC1-203ENST00000425056 ZBTB40Q9NUA8 1239 aa21.58■■□□□ 1.05
GPC1-203ENST00000425056 PCDH10Q9P2E7 1040 aa21.58■■□□□ 1.05
GPC1-203ENST00000425056 HMMRO75330 724 aa21.57■■□□□ 1.04
GPC1-203ENST00000425056 TTF1Q15361 905 aaPredicted RBP21.57■■□□□ 1.04
GPC1-203ENST00000425056 TATDN1Q6P1N9 297 aa21.57■■□□□ 1.04
GPC1-203ENST00000425056 SIRT2Q8IXJ6 389 aa21.57■■□□□ 1.04
GPC1-203ENST00000425056 CLASRPQ8N2M8 674 aaKnown RBP21.57■■□□□ 1.04
GPC1-203ENST00000425056 RIOK1Q9BRS2 568 aaKnown RBP21.57■■□□□ 1.04
GPC1-203ENST00000425056 SERPINB13Q9UIV8 391 aa21.57■■□□□ 1.04
GPC1-203ENST00000425056 COG6Q9Y2V7 657 aa21.57■■□□□ 1.04
GPC1-203ENST00000425056 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.56■■□□□ 1.04
GPC1-203ENST00000425056 PAK6Q9NQU5 681 aaPredicted RBP21.56■■□□□ 1.04
GPC1-203ENST00000425056 SGPL1O95470 568 aa21.55■■□□□ 1.04
GPC1-203ENST00000425056 GH2P01242 217 aa21.55■■□□□ 1.04
GPC1-203ENST00000425056 CAPN2P17655 700 aa21.55■■□□□ 1.04
GPC1-203ENST00000425056 HERVK_113P62684 666 aa21.55■■□□□ 1.04
GPC1-203ENST00000425056 TTC6Q86TZ1 520 aa21.55■■□□□ 1.04
GPC1-203ENST00000425056 TAOK2Q9UL54 1235 aa21.55■■□□□ 1.04
GPC1-203ENST00000425056 FARP2O94887 1054 aaPredicted RBP21.54■■□□□ 1.04
GPC1-203ENST00000425056 PDE6AP16499 860 aa21.54■■□□□ 1.04
GPC1-203ENST00000425056 P2RX7Q99572 595 aaKnown RBP21.54■■□□□ 1.04
GPC1-203ENST00000425056 EMILIN3Q9NT22 766 aa21.54■■□□□ 1.04
GPC1-203ENST00000425056 GJD2Q9UKL4 321 aa21.54■■□□□ 1.04
GPC1-203ENST00000425056 MAGEB6P1A0A0J9YX57 407 aa21.53■■□□□ 1.04
GPC1-203ENST00000425056 H0YGN5 161 aa21.53■■□□□ 1.04
GPC1-203ENST00000425056 APBB1O00213 710 aa21.53■■□□□ 1.04
GPC1-203ENST00000425056 HMGCRP04035 888 aa21.53■■□□□ 1.04
GPC1-203ENST00000425056 IFIT2P09913 472 aaKnown RBP21.53■■□□□ 1.04
GPC1-203ENST00000425056 SLC9C2Q5TAH2 1124 aa21.53■■□□□ 1.04
GPC1-203ENST00000425056 USP17L2Q6R6M4 530 aa21.53■■□□□ 1.04
GPC1-203ENST00000425056 C12orf42Q96LP6 360 aa21.53■■□□□ 1.04
GPC1-203ENST00000425056 HTATIP2Q9BUP3 242 aa21.53■■□□□ 1.04
GPC1-203ENST00000425056 TXNRD2Q9NNW7 524 aa21.53■■□□□ 1.04
GPC1-203ENST00000425056 RAB11FIP3O75154 756 aa21.52■■□□□ 1.04
GPC1-203ENST00000425056 GTF3C2Q8WUA4 911 aaPredicted RBP21.52■■□□□ 1.04
GPC1-203ENST00000425056 DEFB118Q96PH6 123 aa21.52■■□□□ 1.04
GPC1-203ENST00000425056 CHMP4BQ9H444 224 aaKnown RBP21.52■■□□□ 1.04
GPC1-203ENST00000425056 RCAN3Q9UKA8 241 aa21.52■■□□□ 1.04
GPC1-203ENST00000425056 TCRBV5S4A2TA0A5A2 114 aa21.51■■□□□ 1.03
GPC1-203ENST00000425056 GOLIM4O00461 696 aa21.51■■□□□ 1.03
GPC1-203ENST00000425056 SHMT1P34896 483 aa21.51■■□□□ 1.03
GPC1-203ENST00000425056 PLCD1P51178 756 aa21.51■■□□□ 1.03
GPC1-203ENST00000425056 CERKLQ49MI3 558 aaPredicted RBP21.51■■□□□ 1.03
GPC1-203ENST00000425056 GPRC5AQ8NFJ5 357 aa21.51■■□□□ 1.03
GPC1-203ENST00000425056 DNAJC2Q99543 621 aaKnown RBP21.51■■□□□ 1.03
GPC1-203ENST00000425056 FEZ1Q99689 392 aa21.51■■□□□ 1.03
GPC1-203ENST00000425056 CRNKL1Q9BZJ0 848 aaKnown RBP21.51■■□□□ 1.03
GPC1-203ENST00000425056 CRISPLD2Q9H0B8 497 aa21.51■■□□□ 1.03
GPC1-203ENST00000425056 COLQQ9Y215 455 aaPredicted RBP21.51■■□□□ 1.03
GPC1-203ENST00000425056 ZNF532Q9HCE3 1301 aa21.51■■□□□ 1.03
GPC1-203ENST00000425056 MYH7P12883 1935 aa21.51■■□□□ 1.03
GPC1-203ENST00000425056 PEX10O60683 326 aa21.5■■□□□ 1.03
GPC1-203ENST00000425056 GABPAQ06546 454 aa21.5■■□□□ 1.03
GPC1-203ENST00000425056 ABCB5Q2M3G0 1257 aa21.5■■□□□ 1.03
GPC1-203ENST00000425056 SOCS4Q8WXH5 440 aa21.5■■□□□ 1.03
GPC1-203ENST00000425056 DPF3Q92784 378 aa21.5■■□□□ 1.03
GPC1-203ENST00000425056 KIAA1683Q9H0B3 1180 aa21.5■■□□□ 1.03
GPC1-203ENST00000425056 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.5■■□□□ 1.03
GPC1-203ENST00000425056 RBPJLQ9UBG7 517 aa21.5■■□□□ 1.03
GPC1-203ENST00000425056 MAPK4P31152 587 aa21.49■■□□□ 1.03
GPC1-203ENST00000425056 ERVK-9P63128 1117 aa21.49■■□□□ 1.03
GPC1-203ENST00000425056 ERVK-24P63145 666 aa21.49■■□□□ 1.03
GPC1-203ENST00000425056 RAB3GAP1Q15042 981 aa21.49■■□□□ 1.03
GPC1-203ENST00000425056 POTEEQ6S8J3 1075 aa21.49■■□□□ 1.03
GPC1-203ENST00000425056 MYH8P13535 1937 aa21.49■■□□□ 1.03
GPC1-203ENST00000425056 TFRCP02786 760 aaKnown RBP21.48■■□□□ 1.03
GPC1-203ENST00000425056 POLR3DP05423 398 aaPredicted RBP21.48■■□□□ 1.03
GPC1-203ENST00000425056 FXR1P51114 621 aaKnown RBP eCLIP21.48■■□□□ 1.03
GPC1-203ENST00000425056 USP14P54578 494 aa21.48■■□□□ 1.03
GPC1-203ENST00000425056 ZYXQ15942 572 aaKnown RBP21.48■■□□□ 1.03
GPC1-203ENST00000425056 TRIB2Q92519 343 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms