RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 KRT40Q6A162 431 aa16.43■□□□□ 0.22
MSH5-206ENST00000423982 CC2D1AQ6P1N0 951 aaPredicted RBP16.43■□□□□ 0.22
MSH5-206ENST00000423982 TPTE2Q6XPS3 522 aa16.43■□□□□ 0.22
MSH5-206ENST00000423982 RALYLQ86SE5 291 aaKnown RBP16.43■□□□□ 0.22
MSH5-206ENST00000423982 CNBD1Q8NA66 436 aa16.43■□□□□ 0.22
MSH5-206ENST00000423982 NBPF3Q9H094 633 aa16.43■□□□□ 0.22
MSH5-206ENST00000423982 DHX16O60231 1041 aaKnown RBP16.43■□□□□ 0.22
MSH5-206ENST00000423982 ZAP70P43403 619 aa16.43■□□□□ 0.22
MSH5-206ENST00000423982 PNPLA7Q6ZV29 1317 aa16.42■□□□□ 0.22
MSH5-206ENST00000423982 FMR1Q06787 632 aaKnown RBP eCLIP16.42■□□□□ 0.22
MSH5-206ENST00000423982 CYB5R4Q7L1T6 521 aa16.42■□□□□ 0.22
MSH5-206ENST00000423982 MICU3Q86XE3 530 aa16.42■□□□□ 0.22
MSH5-206ENST00000423982 GRAMD1CQ8IYS0 662 aa16.42■□□□□ 0.22
MSH5-206ENST00000423982 NCOA7Q8NI08 942 aa16.42■□□□□ 0.22
MSH5-206ENST00000423982 BAG1Q99933 345 aaPredicted RBP16.42■□□□□ 0.22
MSH5-206ENST00000423982 CASQ1P31415 396 aa16.42■□□□□ 0.22
MSH5-206ENST00000423982 PPP2R3AQ06190 1150 aa16.42■□□□□ 0.22
MSH5-206ENST00000423982 DDR1Q08345 913 aa16.42■□□□□ 0.22
MSH5-206ENST00000423982 CCDC152Q4G0S7 254 aa16.42■□□□□ 0.22
MSH5-206ENST00000423982 FBXL16Q8N461 479 aa16.42■□□□□ 0.22
MSH5-206ENST00000423982 DHX58Q96C10 678 aa16.42■□□□□ 0.22
MSH5-206ENST00000423982 MAP3K14Q99558 947 aa16.42■□□□□ 0.22
MSH5-206ENST00000423982 ZNF213O14771 459 aa16.41■□□□□ 0.22
MSH5-206ENST00000423982 PRR29P0C7W0 189 aa16.41■□□□□ 0.22
MSH5-206ENST00000423982 METTL24Q5JXM2 366 aa16.41■□□□□ 0.22
MSH5-206ENST00000423982 CCDC158Q5M9N0 1113 aa16.41■□□□□ 0.22
MSH5-206ENST00000423982 TTC39AQ5SRH9 613 aa16.41■□□□□ 0.22
MSH5-206ENST00000423982 TC2NQ8N9U0 490 aa16.41■□□□□ 0.22
MSH5-206ENST00000423982 CNNM3Q8NE01 707 aa16.41■□□□□ 0.22
MSH5-206ENST00000423982 PARD6BQ9BYG5 372 aa16.41■□□□□ 0.22
MSH5-206ENST00000423982 CCP110O43303 1012 aa16.41■□□□□ 0.22
MSH5-206ENST00000423982 CBFA2T2O43439 604 aa16.41■□□□□ 0.22
MSH5-206ENST00000423982 TFRCP02786 760 aaKnown RBP16.41■□□□□ 0.22
MSH5-206ENST00000423982 CDK11BP21127 795 aaKnown RBP16.41■□□□□ 0.22
MSH5-206ENST00000423982 MAP3K9P80192 1104 aa16.41■□□□□ 0.22
MSH5-206ENST00000423982 SMC1AQ14683 1233 aaKnown RBP16.41■□□□□ 0.22
MSH5-206ENST00000423982 TBC1D10CQ8IV04 446 aa16.41■□□□□ 0.22
MSH5-206ENST00000423982 XAGE2Q96GT9 111 aa16.41■□□□□ 0.22
MSH5-206ENST00000423982 MPHOSPH8Q99549 860 aa16.41■□□□□ 0.22
MSH5-206ENST00000423982 TULP2O00295 520 aa16.4■□□□□ 0.22
MSH5-206ENST00000423982 ARHGAP6O43182 974 aa16.4■□□□□ 0.22
MSH5-206ENST00000423982 GPAA1O43292 621 aa16.4■□□□□ 0.22
MSH5-206ENST00000423982 SERPINB2P05120 415 aa16.4■□□□□ 0.22
MSH5-206ENST00000423982 OLFM4Q6UX06 510 aa16.4■□□□□ 0.22
MSH5-206ENST00000423982 UBXN6Q9BZV1 441 aa16.4■□□□□ 0.22
MSH5-206ENST00000423982 NYXQ9GZU5 481 aa16.4■□□□□ 0.22
MSH5-206ENST00000423982 MRPL44Q9H9J2 332 aaKnown RBP16.4■□□□□ 0.22
MSH5-206ENST00000423982 KCNH3Q9ULD8 1083 aa16.4■□□□□ 0.22
MSH5-206ENST00000423982 ZSCAN12O43309 604 aa16.4■□□□□ 0.22
MSH5-206ENST00000423982 TUBB4AP04350 444 aa16.4■□□□□ 0.22
MSH5-206ENST00000423982 RAD51AP2Q09MP3 1159 aa16.4■□□□□ 0.22
MSH5-206ENST00000423982 SLC15A2Q16348 729 aa16.4■□□□□ 0.22
MSH5-206ENST00000423982 RESP18Q5W5W9 173 aa16.4■□□□□ 0.22
MSH5-206ENST00000423982 PRR5LQ6MZQ0 368 aa16.4■□□□□ 0.22
MSH5-206ENST00000423982 KRBA2Q6ZNG9 492 aa16.4■□□□□ 0.22
MSH5-206ENST00000423982 KIFC2Q96AC6 838 aa16.4■□□□□ 0.22
MSH5-206ENST00000423982 STK32BQ9NY57 414 aa16.4■□□□□ 0.22
MSH5-206ENST00000423982 MRFAP1Q9Y605 127 aa16.4■□□□□ 0.22
MSH5-206ENST00000423982 TAF1P21675 1872 aa16.4■□□□□ 0.22
MSH5-206ENST00000423982 METAP2P50579 478 aaKnown RBP eCLIP16.39■□□□□ 0.22
MSH5-206ENST00000423982 ZFP91Q96JP5 570 aaPredicted RBP16.39■□□□□ 0.22
MSH5-206ENST00000423982 NLRP3Q96P20 1036 aa16.39■□□□□ 0.22
MSH5-206ENST00000423982 MED15Q96RN5 788 aa16.39■□□□□ 0.22
MSH5-206ENST00000423982 GPR108Q9NPR9 543 aa16.39■□□□□ 0.22
MSH5-206ENST00000423982 CEP126Q9P2H0 1117 aa16.39■□□□□ 0.22
MSH5-206ENST00000423982 NFE2L3Q9Y4A8 694 aa16.39■□□□□ 0.22
MSH5-206ENST00000423982 COL4A1P02462 1669 aa16.39■□□□□ 0.21
MSH5-206ENST00000423982 WTIPA6NIX2 430 aaPredicted RBP16.39■□□□□ 0.21
MSH5-206ENST00000423982 RANBP6O60518 1105 aaKnown RBP16.39■□□□□ 0.21
MSH5-206ENST00000423982 MMP10P09238 476 aa16.39■□□□□ 0.21
MSH5-206ENST00000423982 TBX2Q13207 712 aaPredicted RBP16.39■□□□□ 0.21
MSH5-206ENST00000423982 CELF1Q92879 486 aaKnown RBP16.39■□□□□ 0.21
MSH5-206ENST00000423982 SRRTQ9BXP5 876 aaKnown RBP16.39■□□□□ 0.21
MSH5-206ENST00000423982 SAMSN1Q9NSI8 373 aaKnown RBP16.39■□□□□ 0.21
MSH5-206ENST00000423982 CCDC102BQ68D86 513 aa16.39■□□□□ 0.21
MSH5-206ENST00000423982 RSRC2Q7L4I2 434 aaKnown RBP16.39■□□□□ 0.21
MSH5-206ENST00000423982 B4E1Z4 1266 aa16.38■□□□□ 0.21
MSH5-206ENST00000423982 H3BQF6 201 aa16.38■□□□□ 0.21
MSH5-206ENST00000423982 FUT8Q9BYC5 575 aa16.38■□□□□ 0.21
MSH5-206ENST00000423982 LZTFL1Q9NQ48 299 aa16.38■□□□□ 0.21
MSH5-206ENST00000423982 MAN1B1Q9UKM7 699 aa16.38■□□□□ 0.21
MSH5-206ENST00000423982 SOWAHDA6NJG2 315 aa16.38■□□□□ 0.21
MSH5-206ENST00000423982 PPP6R2O75170 966 aa16.38■□□□□ 0.21
MSH5-206ENST00000423982 CCDC12Q8WUD4 166 aaPredicted RBP16.38■□□□□ 0.21
MSH5-206ENST00000423982 MYH3P11055 1940 aa16.38■□□□□ 0.21
MSH5-206ENST00000423982 DDX60Q8IY21 1712 aaKnown RBP16.38■□□□□ 0.21
MSH5-206ENST00000423982 ZMYM6O95789 1325 aa16.38■□□□□ 0.21
MSH5-206ENST00000423982 POLRMTO00411 1230 aaKnown RBP16.37■□□□□ 0.21
MSH5-206ENST00000423982 APOA5Q6Q788 366 aa16.37■□□□□ 0.21
MSH5-206ENST00000423982 CCDC82Q8N4S0 544 aa16.37■□□□□ 0.21
MSH5-206ENST00000423982 GPR161Q8N6U8 529 aaKnown RBP16.37■□□□□ 0.21
MSH5-206ENST00000423982 APPBP2Q92624 585 aa16.37■□□□□ 0.21
MSH5-206ENST00000423982 CHMP4CQ96CF2 233 aa16.37■□□□□ 0.21
MSH5-206ENST00000423982 PUF60Q9UHX1 559 aaKnown RBP16.37■□□□□ 0.21
MSH5-206ENST00000423982 ANGEL1Q9UNK9 670 aaKnown RBP16.37■□□□□ 0.21
MSH5-206ENST00000423982 APPP05067 770 aa16.37■□□□□ 0.21
MSH5-206ENST00000423982 GUCY1A2P33402 732 aa16.37■□□□□ 0.21
MSH5-206ENST00000423982 IGHMBP2P38935 993 aaKnown RBP16.37■□□□□ 0.21
MSH5-206ENST00000423982 MDM2Q00987 491 aaPredicted RBP16.37■□□□□ 0.21
MSH5-206ENST00000423982 CPLX3Q8WVH0 158 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms