RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 ERICH2A1L162 156 aa11.79□□□□□ -0.52
HDLBP-209ENST00000422933 HMGB1P09429 215 aaKnown RBP11.79□□□□□ -0.52
HDLBP-209ENST00000422933 SART3Q15020 963 aaKnown RBP11.79□□□□□ -0.52
HDLBP-209ENST00000422933 MAP3K11Q16584 847 aa11.79□□□□□ -0.52
HDLBP-209ENST00000422933 CREB3L3Q68CJ9 461 aa11.79□□□□□ -0.52
HDLBP-209ENST00000422933 TATDN1Q6P1N9 297 aa11.79□□□□□ -0.52
HDLBP-209ENST00000422933 PAXIP1Q6ZW49 1069 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-209ENST00000422933 IQCA1Q86XH1 822 aa11.79□□□□□ -0.52
HDLBP-209ENST00000422933 NCOA7Q8NI08 942 aa11.79□□□□□ -0.52
HDLBP-209ENST00000422933 STAG1Q8WVM7 1258 aa11.79□□□□□ -0.52
HDLBP-209ENST00000422933 DYNLL2Q96FJ2 89 aa11.79□□□□□ -0.52
HDLBP-209ENST00000422933 IL25Q9H293 177 aa11.79□□□□□ -0.52
HDLBP-209ENST00000422933 DDX60LQ5H9U9 1706 aaKnown RBP11.79□□□□□ -0.52
HDLBP-209ENST00000422933 FAM196BA6NMK8 535 aa11.78□□□□□ -0.52
HDLBP-209ENST00000422933 UBE2Q2LH0YL09 131 aa11.78□□□□□ -0.52
HDLBP-209ENST00000422933 SLC27A2O14975 620 aa11.78□□□□□ -0.52
HDLBP-209ENST00000422933 ORC4O43929 436 aa11.78□□□□□ -0.52
HDLBP-209ENST00000422933 CAP2P40123 477 aa11.78□□□□□ -0.52
HDLBP-209ENST00000422933 GABPAQ06546 454 aa11.78□□□□□ -0.52
HDLBP-209ENST00000422933 NECTIN1Q15223 517 aa11.78□□□□□ -0.52
HDLBP-209ENST00000422933 C8orf34Q49A92 452 aa11.78□□□□□ -0.52
HDLBP-209ENST00000422933 TMEM179Q6ZVK1 233 aa11.78□□□□□ -0.52
HDLBP-209ENST00000422933 SCYL3Q8IZE3 742 aa11.78□□□□□ -0.52
HDLBP-209ENST00000422933 CCDC102AQ96A19 550 aa11.78□□□□□ -0.52
HDLBP-209ENST00000422933 USP26Q9BXU7 913 aa11.78□□□□□ -0.52
HDLBP-209ENST00000422933 SH2D4AQ9H788 454 aa11.78□□□□□ -0.52
HDLBP-209ENST00000422933 ZNF112Q9UJU3 913 aa11.78□□□□□ -0.52
HDLBP-209ENST00000422933 USP17L5A8MUK1 530 aa11.77□□□□□ -0.53
HDLBP-209ENST00000422933 FOXP2O15409 715 aa11.77□□□□□ -0.53
HDLBP-209ENST00000422933 CYP21A2P08686 494 aa11.77□□□□□ -0.53
HDLBP-209ENST00000422933 HSPA4P34932 840 aa11.77□□□□□ -0.53
HDLBP-209ENST00000422933 ECE1P42892 770 aa11.77□□□□□ -0.53
HDLBP-209ENST00000422933 ZNF157P51786 506 aaPredicted RBP11.77□□□□□ -0.53
HDLBP-209ENST00000422933 FGD1P98174 961 aa11.77□□□□□ -0.53
HDLBP-209ENST00000422933 TFAP4Q01664 338 aa11.77□□□□□ -0.53
HDLBP-209ENST00000422933 RAB3GAP1Q15042 981 aa11.77□□□□□ -0.53
HDLBP-209ENST00000422933 NOL9Q5SY16 702 aaKnown RBP11.77□□□□□ -0.53
HDLBP-209ENST00000422933 CST9Q5W186 159 aa11.77□□□□□ -0.53
HDLBP-209ENST00000422933 DLK2Q6UY11 383 aa11.77□□□□□ -0.53
HDLBP-209ENST00000422933 ERO1BQ86YB8 467 aa11.77□□□□□ -0.53
HDLBP-209ENST00000422933 CDAN1Q8IWY9 1227 aa11.77□□□□□ -0.53
HDLBP-209ENST00000422933 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.77□□□□□ -0.53
HDLBP-209ENST00000422933 UBAC1Q9BSL1 405 aa11.77□□□□□ -0.53
HDLBP-209ENST00000422933 KANSL2Q9H9L4 492 aa11.77□□□□□ -0.53
HDLBP-209ENST00000422933 ARHGEF10LQ9HCE6 1279 aa11.77□□□□□ -0.53
HDLBP-209ENST00000422933 WBP1LQ9NX94 342 aa11.77□□□□□ -0.53
HDLBP-209ENST00000422933 TLL2Q9Y6L7 1015 aa11.77□□□□□ -0.53
HDLBP-209ENST00000422933 PHF20L1A8MW92 1017 aa11.76□□□□□ -0.53
HDLBP-209ENST00000422933 E7EWF7 191 aa11.76□□□□□ -0.53
HDLBP-209ENST00000422933 PRDM1O75626 825 aa11.76□□□□□ -0.53
HDLBP-209ENST00000422933 GDF11O95390 407 aa11.76□□□□□ -0.53
HDLBP-209ENST00000422933 GH2P01242 217 aa11.76□□□□□ -0.53
HDLBP-209ENST00000422933 SHMT1P34896 483 aa11.76□□□□□ -0.53
HDLBP-209ENST00000422933 LBX1P52954 281 aa11.76□□□□□ -0.53
HDLBP-209ENST00000422933 ANAPC15P60006 121 aa11.76□□□□□ -0.53
HDLBP-209ENST00000422933 DEFB115Q30KQ5 88 aa11.76□□□□□ -0.53
HDLBP-209ENST00000422933 LDLRAD1Q5T700 205 aa11.76□□□□□ -0.53
HDLBP-209ENST00000422933 RGMBQ6NW40 437 aa11.76□□□□□ -0.53
HDLBP-209ENST00000422933 SLC44A5Q8NCS7 719 aa11.76□□□□□ -0.53
HDLBP-209ENST00000422933 ZKSCAN4Q969J2 545 aaPredicted RBP11.76□□□□□ -0.53
HDLBP-209ENST00000422933 HHIPL1Q96JK4 782 aa11.76□□□□□ -0.53
HDLBP-209ENST00000422933 NEK1Q96PY6 1258 aa11.76□□□□□ -0.53
HDLBP-209ENST00000422933 ELP3Q9H9T3 547 aa11.76□□□□□ -0.53
HDLBP-209ENST00000422933 PRDM10Q9NQV6 1147 aa11.76□□□□□ -0.53
HDLBP-209ENST00000422933 ZBTB21Q9ULJ3 1066 aa11.76□□□□□ -0.53
HDLBP-209ENST00000422933 ATAD5Q96QE3 1844 aa11.76□□□□□ -0.53
HDLBP-209ENST00000422933 DOCK1Q14185 1865 aa11.76□□□□□ -0.53
HDLBP-209ENST00000422933 SIPA1L1O43166 1804 aa11.75□□□□□ -0.53
HDLBP-209ENST00000422933 RASSF10A6NK89 507 aa11.75□□□□□ -0.53
HDLBP-209ENST00000422933 KDM4AO75164 1064 aa11.75□□□□□ -0.53
HDLBP-209ENST00000422933 FGRP09769 529 aa11.75□□□□□ -0.53
HDLBP-209ENST00000422933 HSPA8P11142 646 aaKnown RBP11.75□□□□□ -0.53
HDLBP-209ENST00000422933 RASA1P20936 1047 aa11.75□□□□□ -0.53
HDLBP-209ENST00000422933 INPP5BP32019 993 aa11.75□□□□□ -0.53
HDLBP-209ENST00000422933 MCM5P33992 734 aa11.75□□□□□ -0.53
HDLBP-209ENST00000422933 ATP2B2Q01814 1243 aa11.75□□□□□ -0.53
HDLBP-209ENST00000422933 PPATQ06203 517 aa11.75□□□□□ -0.53
HDLBP-209ENST00000422933 VGLL4Q14135 290 aa11.75□□□□□ -0.53
HDLBP-209ENST00000422933 TSGA10IPQ3SY00 556 aa11.75□□□□□ -0.53
HDLBP-209ENST00000422933 SAPCD2Q86UD0 394 aa11.75□□□□□ -0.53
HDLBP-209ENST00000422933 IL27Q8NEV9 243 aa11.75□□□□□ -0.53
HDLBP-209ENST00000422933 NEDD1Q8NHV4 660 aa11.75□□□□□ -0.53
HDLBP-209ENST00000422933 FEZ1Q99689 392 aa11.75□□□□□ -0.53
HDLBP-209ENST00000422933 BACH2Q9BYV9 841 aa11.75□□□□□ -0.53
HDLBP-209ENST00000422933 C22orf23Q9BZE7 217 aa11.75□□□□□ -0.53
HDLBP-209ENST00000422933 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.75□□□□□ -0.53
HDLBP-209ENST00000422933 ZHX2Q9Y6X8 837 aa11.75□□□□□ -0.53
HDLBP-209ENST00000422933 SSC5DA1L4H1 1573 aa11.75□□□□□ -0.53
HDLBP-209ENST00000422933 CASP8AP2Q9UKL3 1982 aa11.74□□□□□ -0.53
HDLBP-209ENST00000422933 B4E1Z4 1266 aa11.74□□□□□ -0.53
HDLBP-209ENST00000422933 ZBTB48P10074 688 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-209ENST00000422933 USP14P54578 494 aa11.74□□□□□ -0.53
HDLBP-209ENST00000422933 ICA1Q05084 483 aa11.74□□□□□ -0.53
HDLBP-209ENST00000422933 FAM47AQ5JRC9 791 aa11.74□□□□□ -0.53
HDLBP-209ENST00000422933 BLOC1S2Q6QNY1 142 aa11.74□□□□□ -0.53
HDLBP-209ENST00000422933 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-209ENST00000422933 MOB2Q70IA6 237 aa11.74□□□□□ -0.53
HDLBP-209ENST00000422933 TBC1D10CQ8IV04 446 aa11.74□□□□□ -0.53
HDLBP-209ENST00000422933 TMTC2Q8N394 836 aa11.74□□□□□ -0.53
HDLBP-209ENST00000422933 TTC14Q96N46 770 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms