RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 HOXA7P31268 230 aaPredicted RBP22.81■■□□□ 1.24
AC004540.1-203ENST00000421862 MYH8P13535 1937 aa22.8■■□□□ 1.24
AC004540.1-203ENST00000421862 ZBTB7BO15156 539 aaPredicted RBP22.8■■□□□ 1.24
AC004540.1-203ENST00000421862 FOXP4Q8IVH2 680 aaPredicted RBP22.8■■□□□ 1.24
AC004540.1-203ENST00000421862 DEFB118Q96PH6 123 aa22.8■■□□□ 1.24
AC004540.1-203ENST00000421862 GJD2Q9UKL4 321 aa22.8■■□□□ 1.24
AC004540.1-203ENST00000421862 ZBTB21Q9ULJ3 1066 aa22.8■■□□□ 1.24
AC004540.1-203ENST00000421862 HMGCRP04035 888 aa22.79■■□□□ 1.24
AC004540.1-203ENST00000421862 SHROOM1Q2M3G4 852 aaPredicted RBP22.79■■□□□ 1.24
AC004540.1-203ENST00000421862 FTSJ3Q8IY81 847 aaKnown RBP22.79■■□□□ 1.24
AC004540.1-203ENST00000421862 EAF2Q96CJ1 260 aaPredicted RBP22.79■■□□□ 1.24
AC004540.1-203ENST00000421862 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.79■■□□□ 1.24
AC004540.1-203ENST00000421862 RBM27Q9P2N5 1060 aaKnown RBP22.79■■□□□ 1.24
AC004540.1-203ENST00000421862 PALD1Q9ULE6 856 aa22.79■■□□□ 1.24
AC004540.1-203ENST00000421862 C19orf81C9J6K1 198 aa22.78■■□□□ 1.24
AC004540.1-203ENST00000421862 CERS3Q8IU89 383 aa22.78■■□□□ 1.24
AC004540.1-203ENST00000421862 ITPRIPQ8IWB1 547 aa22.78■■□□□ 1.24
AC004540.1-203ENST00000421862 A0A0G2JMZ2 1700 aa22.77■■□□□ 1.24
AC004540.1-203ENST00000421862 MYH7P12883 1935 aa22.77■■□□□ 1.24
AC004540.1-203ENST00000421862 GDF11O95390 407 aa22.77■■□□□ 1.24
AC004540.1-203ENST00000421862 IRX3P78415 501 aaPredicted RBP22.77■■□□□ 1.24
AC004540.1-203ENST00000421862 CEP85Q6P2H3 762 aa22.77■■□□□ 1.24
AC004540.1-203ENST00000421862 TMED8Q6PL24 325 aaPredicted RBP22.77■■□□□ 1.24
AC004540.1-203ENST00000421862 CRACR2BQ8N4Y2 399 aaPredicted RBP22.77■■□□□ 1.24
AC004540.1-203ENST00000421862 TMOD4Q9NZQ9 345 aa22.77■■□□□ 1.24
AC004540.1-203ENST00000421862 TAOK2Q9UL54 1235 aa22.77■■□□□ 1.24
AC004540.1-203ENST00000421862 NR2E3Q9Y5X4 410 aa22.77■■□□□ 1.24
AC004540.1-203ENST00000421862 USP17L10C9JJH3 530 aa22.76■■□□□ 1.23
AC004540.1-203ENST00000421862 HLA-DOAP06340 250 aa22.76■■□□□ 1.23
AC004540.1-203ENST00000421862 HERVK_113P62684 666 aa22.76■■□□□ 1.23
AC004540.1-203ENST00000421862 DYNLL1P63167 89 aaKnown RBP22.76■■□□□ 1.23
AC004540.1-203ENST00000421862 CCDC8Q9H0W5 538 aaPredicted RBP22.76■■□□□ 1.23
AC004540.1-203ENST00000421862 TXNRD2Q9NNW7 524 aa22.76■■□□□ 1.23
AC004540.1-203ENST00000421862 LAMA3Q16787 3333 aa22.76■■□□□ 1.23
AC004540.1-203ENST00000421862 CYP7A1P22680 504 aa22.75■■□□□ 1.23
AC004540.1-203ENST00000421862 ANKLE1Q8NAG6 615 aa22.75■■□□□ 1.23
AC004540.1-203ENST00000421862 TRIB2Q92519 343 aa22.75■■□□□ 1.23
AC004540.1-203ENST00000421862 TRIM34Q9BYJ4 488 aa22.75■■□□□ 1.23
AC004540.1-203ENST00000421862 EHD4Q9H223 541 aa22.75■■□□□ 1.23
AC004540.1-203ENST00000421862 PARP14Q460N5 1801 aa22.75■■□□□ 1.23
AC004540.1-203ENST00000421862 ZNF236Q9UL36 1845 aa22.75■■□□□ 1.23
AC004540.1-203ENST00000421862 TFRCP02786 760 aaKnown RBP22.74■■□□□ 1.23
AC004540.1-203ENST00000421862 HNRNPUQ00839 825 aaKnown RBP eCLIP22.74■■□□□ 1.23
AC004540.1-203ENST00000421862 MAP3K21Q5TCX8 1036 aa22.74■■□□□ 1.23
AC004540.1-203ENST00000421862 TATDN1Q6P1N9 297 aa22.74■■□□□ 1.23
AC004540.1-203ENST00000421862 SOCS4Q8WXH5 440 aa22.74■■□□□ 1.23
AC004540.1-203ENST00000421862 C12orf42Q96LP6 360 aa22.74■■□□□ 1.23
AC004540.1-203ENST00000421862 P2RX7Q99572 595 aaKnown RBP22.74■■□□□ 1.23
AC004540.1-203ENST00000421862 SAP30BPQ9UHR5 308 aaKnown RBP22.74■■□□□ 1.23
AC004540.1-203ENST00000421862 RPTORQ8N122 1335 aa22.74■■□□□ 1.23
AC004540.1-203ENST00000421862 RLFQ13129 1914 aa22.74■■□□□ 1.23
AC004540.1-203ENST00000421862 IDH1O75874 414 aaKnown RBP22.73■■□□□ 1.23
AC004540.1-203ENST00000421862 TRIM32Q13049 653 aa22.73■■□□□ 1.23
AC004540.1-203ENST00000421862 DIS3LQ8TF46 1054 aaKnown RBP22.73■■□□□ 1.23
AC004540.1-203ENST00000421862 GTF3C2Q8WUA4 911 aaPredicted RBP22.73■■□□□ 1.23
AC004540.1-203ENST00000421862 A0A1W2PPC1 479 aa22.72■■□□□ 1.23
AC004540.1-203ENST00000421862 XRCC5P13010 732 aaKnown RBP22.72■■□□□ 1.23
AC004540.1-203ENST00000421862 MNX1P50219 401 aaPredicted RBP22.72■■□□□ 1.23
AC004540.1-203ENST00000421862 POTEEQ6S8J3 1075 aa22.72■■□□□ 1.23
AC004540.1-203ENST00000421862 MAGEB6Q8N7X4 407 aa22.72■■□□□ 1.23
AC004540.1-203ENST00000421862 MIGA1Q8NAN2 632 aa22.72■■□□□ 1.23
AC004540.1-203ENST00000421862 GPRC5AQ8NFJ5 357 aa22.72■■□□□ 1.23
AC004540.1-203ENST00000421862 PAWRQ96IZ0 340 aaKnown RBP22.72■■□□□ 1.23
AC004540.1-203ENST00000421862 ANTXR1Q9H6X2 564 aa22.72■■□□□ 1.23
AC004540.1-203ENST00000421862 EMILIN3Q9NT22 766 aa22.72■■□□□ 1.23
AC004540.1-203ENST00000421862 RBPJLQ9UBG7 517 aa22.72■■□□□ 1.23
AC004540.1-203ENST00000421862 NDUFB9Q9Y6M9 179 aa22.72■■□□□ 1.23
AC004540.1-203ENST00000421862 EVI5O60447 810 aa22.71■■□□□ 1.23
AC004540.1-203ENST00000421862 PEX10O60683 326 aa22.71■■□□□ 1.23
AC004540.1-203ENST00000421862 ERVK-9P63128 1117 aa22.71■■□□□ 1.23
AC004540.1-203ENST00000421862 ERVK-24P63145 666 aa22.71■■□□□ 1.23
AC004540.1-203ENST00000421862 NECAB2Q7Z6G3 386 aa22.71■■□□□ 1.23
AC004540.1-203ENST00000421862 ERC1Q8IUD2 1116 aa22.71■■□□□ 1.23
AC004540.1-203ENST00000421862 USP6NLQ92738 828 aa22.71■■□□□ 1.23
AC004540.1-203ENST00000421862 HMX1Q9NP08 348 aaPredicted RBP22.71■■□□□ 1.23
AC004540.1-203ENST00000421862 SERPINB13Q9UIV8 391 aa22.71■■□□□ 1.23
AC004540.1-203ENST00000421862 EXOC6BQ9Y2D4 811 aa22.71■■□□□ 1.23
AC004540.1-203ENST00000421862 GH2P01242 217 aa22.7■■□□□ 1.22
AC004540.1-203ENST00000421862 MAPK4P31152 587 aa22.7■■□□□ 1.22
AC004540.1-203ENST00000421862 USP17L2Q6R6M4 530 aa22.7■■□□□ 1.22
AC004540.1-203ENST00000421862 NUDT12Q9BQG2 462 aa22.7■■□□□ 1.22
AC004540.1-203ENST00000421862 RIOK1Q9BRS2 568 aaKnown RBP22.7■■□□□ 1.22
AC004540.1-203ENST00000421862 ZBED9Q6R2W3 1325 aa22.7■■□□□ 1.22
AC004540.1-203ENST00000421862 BAZ2AQ9UIF9 1905 aaKnown RBP22.7■■□□□ 1.22
AC004540.1-203ENST00000421862 USP5P45974 858 aa22.69■■□□□ 1.22
AC004540.1-203ENST00000421862 MAP3K12Q12852 859 aa22.69■■□□□ 1.22
AC004540.1-203ENST00000421862 PORCNQ9H237 461 aa22.69■■□□□ 1.22
AC004540.1-203ENST00000421862 OGDHLQ9ULD0 1010 aa22.69■■□□□ 1.22
AC004540.1-203ENST00000421862 Q3C1V9 767 aa22.68■■□□□ 1.22
AC004540.1-203ENST00000421862 GPR142Q7Z601 462 aa22.68■■□□□ 1.22
AC004540.1-203ENST00000421862 AACSQ86V21 672 aa22.68■■□□□ 1.22
AC004540.1-203ENST00000421862 TRMT44Q8IYL2 757 aaKnown RBP22.68■■□□□ 1.22
AC004540.1-203ENST00000421862 PRKAR2AP13861 404 aaKnown RBP22.67■■□□□ 1.22
AC004540.1-203ENST00000421862 CYP2B6P20813 491 aa22.67■■□□□ 1.22
AC004540.1-203ENST00000421862 MORN1Q5T089 497 aa22.67■■□□□ 1.22
AC004540.1-203ENST00000421862 KIAA1683Q9H0B3 1180 aa22.67■■□□□ 1.22
AC004540.1-203ENST00000421862 CNMDO75829 334 aa22.66■■□□□ 1.22
AC004540.1-203ENST00000421862 SHMT1P34896 483 aa22.66■■□□□ 1.22
AC004540.1-203ENST00000421862 PDE3AQ14432 1141 aa22.66■■□□□ 1.22
AC004540.1-203ENST00000421862 LBX2Q6XYB7 198 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 1663 ms