RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 NEK1Q96PY6 1258 aa15.17■□□□□ 0.02
ATG4B-208ENST00000419606 ZKSCAN3Q9BRR0 538 aa15.17■□□□□ 0.02
ATG4B-208ENST00000419606 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.17■□□□□ 0.02
ATG4B-208ENST00000419606 ZNF341Q9BYN7 854 aa15.17■□□□□ 0.02
ATG4B-208ENST00000419606 UPF3BQ9BZI7 483 aaKnown RBP15.17■□□□□ 0.02
ATG4B-208ENST00000419606 ZSWIM5Q9P217 1185 aa15.17■□□□□ 0.02
ATG4B-208ENST00000419606 ZNF112Q9UJU3 913 aa15.17■□□□□ 0.02
ATG4B-208ENST00000419606 TRPM7Q96QT4 1865 aa15.16■□□□□ 0.02
ATG4B-208ENST00000419606 GREB1LQ9C091 1923 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-208ENST00000419606 NMT2O60551 498 aa15.16■□□□□ 0.02
ATG4B-208ENST00000419606 TOMM70O94826 608 aa15.16■□□□□ 0.02
ATG4B-208ENST00000419606 CASTP20810 708 aaKnown RBP15.16■□□□□ 0.02
ATG4B-208ENST00000419606 KRT32Q14532 448 aa15.16■□□□□ 0.02
ATG4B-208ENST00000419606 CST9Q5W186 159 aa15.16■□□□□ 0.02
ATG4B-208ENST00000419606 DCAF15Q66K64 600 aa15.16■□□□□ 0.02
ATG4B-208ENST00000419606 RALYLQ86SE5 291 aaKnown RBP15.16■□□□□ 0.02
ATG4B-208ENST00000419606 CCDC84Q86UT8 332 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-208ENST00000419606 CLEC10AQ8IUN9 316 aa15.16■□□□□ 0.02
ATG4B-208ENST00000419606 ZNF444Q8N0Y2 327 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-208ENST00000419606 ZKSCAN4Q969J2 545 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-208ENST00000419606 KLRG1Q96E93 195 aa15.16■□□□□ 0.02
ATG4B-208ENST00000419606 WRNIP1Q96S55 665 aa15.16■□□□□ 0.02
ATG4B-208ENST00000419606 LRRC2Q9BYS8 371 aa15.16■□□□□ 0.02
ATG4B-208ENST00000419606 GPHNQ9NQX3 736 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-208ENST00000419606 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-208ENST00000419606 ANGEL1Q9UNK9 670 aaKnown RBP15.16■□□□□ 0.02
ATG4B-208ENST00000419606 TSPY2A6NKD2 308 aa15.15■□□□□ 0.02
ATG4B-208ENST00000419606 MPHOSPH10O00566 681 aaKnown RBP15.15■□□□□ 0.02
ATG4B-208ENST00000419606 CELF2O95319 508 aaKnown RBP15.15■□□□□ 0.02
ATG4B-208ENST00000419606 GH2P01242 217 aa15.15■□□□□ 0.02
ATG4B-208ENST00000419606 GUCY1A2P33402 732 aa15.15■□□□□ 0.02
ATG4B-208ENST00000419606 EXOSC10Q01780 885 aaKnown RBP15.15■□□□□ 0.02
ATG4B-208ENST00000419606 TRDNQ13061 729 aa15.15■□□□□ 0.02
ATG4B-208ENST00000419606 TTLL12Q14166 644 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-208ENST00000419606 SMC1BQ8NDV3 1235 aa15.15■□□□□ 0.02
ATG4B-208ENST00000419606 RBM46Q8TBY0 533 aaKnown RBP15.15■□□□□ 0.02
ATG4B-208ENST00000419606 ESR2Q92731 530 aa15.15■□□□□ 0.02
ATG4B-208ENST00000419606 HOOK2Q96ED9 719 aa15.15■□□□□ 0.02
ATG4B-208ENST00000419606 KRT23Q9C075 422 aa15.15■□□□□ 0.02
ATG4B-208ENST00000419606 CNNM2Q9H8M5 875 aa15.15■□□□□ 0.02
ATG4B-208ENST00000419606 ZSWIM6Q9HCJ5 1215 aa15.15■□□□□ 0.02
ATG4B-208ENST00000419606 IL17RBQ9NRM6 502 aa15.15■□□□□ 0.02
ATG4B-208ENST00000419606 PASKQ96RG2 1323 aa15.15■□□□□ 0.02
ATG4B-208ENST00000419606 DOCK1Q14185 1865 aa15.14■□□□□ 0.01
ATG4B-208ENST00000419606 UBE2Q2LH0YL09 131 aa15.14■□□□□ 0.01
ATG4B-208ENST00000419606 PRC1O43663 620 aa15.14■□□□□ 0.01
ATG4B-208ENST00000419606 PCP11498 1178 aaKnown RBP15.14■□□□□ 0.01
ATG4B-208ENST00000419606 RPS6KB1P23443 525 aa15.14■□□□□ 0.01
ATG4B-208ENST00000419606 NF2P35240 595 aa15.14■□□□□ 0.01
ATG4B-208ENST00000419606 CAP2P40123 477 aa15.14■□□□□ 0.01
ATG4B-208ENST00000419606 SEPT2Q15019 361 aa15.14■□□□□ 0.01
ATG4B-208ENST00000419606 ABCB5Q2M3G0 1257 aa15.14■□□□□ 0.01
ATG4B-208ENST00000419606 BLOC1S2Q6QNY1 142 aa15.14■□□□□ 0.01
ATG4B-208ENST00000419606 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-208ENST00000419606 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.14■□□□□ 0.01
ATG4B-208ENST00000419606 CLMNQ96JQ2 1002 aa15.14■□□□□ 0.01
ATG4B-208ENST00000419606 TM6SF1Q9BZW5 370 aa15.14■□□□□ 0.01
ATG4B-208ENST00000419606 ZNF287Q9HBT7 754 aa15.14■□□□□ 0.01
ATG4B-208ENST00000419606 SENP2Q9HC62 589 aa15.14■□□□□ 0.01
ATG4B-208ENST00000419606 IGKV6D-41A0A0C4DH26 115 aa15.13■□□□□ 0.01
ATG4B-208ENST00000419606 PPP1R12BO60237 982 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-208ENST00000419606 TSPY3P0CV98 308 aa15.13■□□□□ 0.01
ATG4B-208ENST00000419606 TSPY8P0CW00 308 aa15.13■□□□□ 0.01
ATG4B-208ENST00000419606 PSMA5P28066 241 aa15.13■□□□□ 0.01
ATG4B-208ENST00000419606 RUFY3Q7L099 469 aa15.13■□□□□ 0.01
ATG4B-208ENST00000419606 DHX32Q7L7V1 743 aaKnown RBP15.13■□□□□ 0.01
ATG4B-208ENST00000419606 NEDD1Q8NHV4 660 aa15.13■□□□□ 0.01
ATG4B-208ENST00000419606 CCDC17Q96LX7 622 aa15.13■□□□□ 0.01
ATG4B-208ENST00000419606 GBA2Q9HCG7 927 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-208ENST00000419606 ZBTB21Q9ULJ3 1066 aa15.13■□□□□ 0.01
ATG4B-208ENST00000419606 CTNND1O60716 968 aaKnown RBP15.12■□□□□ 0.01
ATG4B-208ENST00000419606 MCM5P33992 734 aa15.12■□□□□ 0.01
ATG4B-208ENST00000419606 MAP3K9P80192 1104 aa15.12■□□□□ 0.01
ATG4B-208ENST00000419606 VGLL4Q14135 290 aa15.12■□□□□ 0.01
ATG4B-208ENST00000419606 RAB3GAP1Q15042 981 aa15.12■□□□□ 0.01
ATG4B-208ENST00000419606 MAP3K11Q16584 847 aa15.12■□□□□ 0.01
ATG4B-208ENST00000419606 SIAH1Q8IUQ4 282 aa15.12■□□□□ 0.01
ATG4B-208ENST00000419606 IGDCC4Q8TDY8 1250 aa15.12■□□□□ 0.01
ATG4B-208ENST00000419606 CEP95Q96GE4 821 aa15.12■□□□□ 0.01
ATG4B-208ENST00000419606 LARP6Q9BRS8 491 aaKnown RBP15.12■□□□□ 0.01
ATG4B-208ENST00000419606 TAOK2Q9UL54 1235 aa15.12■□□□□ 0.01
ATG4B-208ENST00000419606 CYP46A1Q9Y6A2 500 aa15.12■□□□□ 0.01
ATG4B-208ENST00000419606 SNCAIPQ9Y6H5 919 aa15.12■□□□□ 0.01
ATG4B-208ENST00000419606 PHIPQ8WWQ0 1821 aa15.12■□□□□ 0.01
ATG4B-208ENST00000419606 PLIN4Q96Q06 1357 aa15.11■□□□□ 0.01
ATG4B-208ENST00000419606 IFIT3O14879 490 aaKnown RBP15.11■□□□□ 0.01
ATG4B-208ENST00000419606 IREB2P48200 963 aaKnown RBP15.11■□□□□ 0.01
ATG4B-208ENST00000419606 NEK4P51957 841 aa15.11■□□□□ 0.01
ATG4B-208ENST00000419606 LDLRAD1Q5T700 205 aa15.11■□□□□ 0.01
ATG4B-208ENST00000419606 RCSD1Q6JBY9 416 aa15.11■□□□□ 0.01
ATG4B-208ENST00000419606 Q6ZUG5 572 aa15.11■□□□□ 0.01
ATG4B-208ENST00000419606 ARMC9Q7Z3E5 817 aa15.11■□□□□ 0.01
ATG4B-208ENST00000419606 CNKSR2Q8WXI2 1034 aa15.11■□□□□ 0.01
ATG4B-208ENST00000419606 TTC14Q96N46 770 aa15.11■□□□□ 0.01
ATG4B-208ENST00000419606 ZSCAN10Q96SZ4 725 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-208ENST00000419606 ELP3Q9H9T3 547 aa15.11■□□□□ 0.01
ATG4B-208ENST00000419606 TNKSO95271 1327 aa15.11■□□□□ 0.01
ATG4B-208ENST00000419606 MYH4Q9Y623 1939 aa15.1■□□□□ 0.01
ATG4B-208ENST00000419606 SH2B2O14492 632 aaPredicted RBP15.1■□□□□ 0.01
ATG4B-208ENST00000419606 CD2BP2O95400 341 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms