RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 MYPNQ86TC9 1320 aa11.49□□□□□ -0.57
NUP50-205ENST00000419387 PHIPQ8WWQ0 1821 aa11.49□□□□□ -0.57
NUP50-205ENST00000419387 RAB11FIP3O75154 756 aa11.48□□□□□ -0.57
NUP50-205ENST00000419387 HLA-DOAP06340 250 aa11.48□□□□□ -0.57
NUP50-205ENST00000419387 ASNSP08243 561 aa11.48□□□□□ -0.57
NUP50-205ENST00000419387 GRK4P32298 578 aa11.48□□□□□ -0.57
NUP50-205ENST00000419387 USP5P45974 858 aa11.48□□□□□ -0.57
NUP50-205ENST00000419387 HMGCS2P54868 508 aa11.48□□□□□ -0.57
NUP50-205ENST00000419387 PABPC4Q13310 644 aaKnown RBP eCLIP11.48□□□□□ -0.57
NUP50-205ENST00000419387 TTF1Q15361 905 aaPredicted RBP11.48□□□□□ -0.57
NUP50-205ENST00000419387 MIGA1Q8NAN2 632 aa11.48□□□□□ -0.57
NUP50-205ENST00000419387 WDR18Q9BV38 432 aa11.48□□□□□ -0.57
NUP50-205ENST00000419387 GINM1Q9NU53 330 aa11.48□□□□□ -0.57
NUP50-205ENST00000419387 SAP30BPQ9UHR5 308 aaKnown RBP11.48□□□□□ -0.57
NUP50-205ENST00000419387 MAST2Q6P0Q8 1798 aa11.48□□□□□ -0.57
NUP50-205ENST00000419387 HTTP42858 3142 aa11.47□□□□□ -0.57
NUP50-205ENST00000419387 KIAA0100Q14667 2235 aaKnown RBP11.47□□□□□ -0.57
NUP50-205ENST00000419387 MYO5AQ9Y4I1 1855 aaKnown RBP11.47□□□□□ -0.57
NUP50-205ENST00000419387 APBB1O00213 710 aa11.47□□□□□ -0.57
NUP50-205ENST00000419387 IFIT2P09913 472 aaKnown RBP11.47□□□□□ -0.57
NUP50-205ENST00000419387 BACE1P56817 501 aa11.47□□□□□ -0.57
NUP50-205ENST00000419387 JAG1P78504 1218 aa11.47□□□□□ -0.57
NUP50-205ENST00000419387 PRKCZQ05513 592 aa11.47□□□□□ -0.57
NUP50-205ENST00000419387 ANKRD13CQ8N6S4 541 aa11.47□□□□□ -0.57
NUP50-205ENST00000419387 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.47□□□□□ -0.57
NUP50-205ENST00000419387 GABRQQ9UN88 632 aa11.47□□□□□ -0.57
NUP50-205ENST00000419387 PTPRFP10586 1907 aa11.47□□□□□ -0.57
NUP50-205ENST00000419387 RBBP6Q7Z6E9 1792 aaKnown RBP11.46□□□□□ -0.57
NUP50-205ENST00000419387 C19orf81C9J6K1 198 aa11.46□□□□□ -0.57
NUP50-205ENST00000419387 TNPO2O14787 897 aaKnown RBP11.46□□□□□ -0.57
NUP50-205ENST00000419387 GDF11O95390 407 aa11.46□□□□□ -0.57
NUP50-205ENST00000419387 GCLCP48506 637 aaPredicted RBP11.46□□□□□ -0.57
NUP50-205ENST00000419387 UBXN2AP68543 259 aa11.46□□□□□ -0.57
NUP50-205ENST00000419387 PDE3AQ14432 1141 aa11.46□□□□□ -0.57
NUP50-205ENST00000419387 MTFR1Q15390 333 aa11.46□□□□□ -0.57
NUP50-205ENST00000419387 FAM110CQ1W6H9 321 aa11.46□□□□□ -0.57
NUP50-205ENST00000419387 ASCC2Q9H1I8 757 aaPredicted RBP11.46□□□□□ -0.57
NUP50-205ENST00000419387 TMOD4Q9NZQ9 345 aa11.46□□□□□ -0.57
NUP50-205ENST00000419387 BIN2Q9UBW5 565 aaPredicted RBP11.46□□□□□ -0.57
NUP50-205ENST00000419387 SIPA1L1O43166 1804 aa11.45□□□□□ -0.58
NUP50-205ENST00000419387 USP17L10C9JJH3 530 aa11.45□□□□□ -0.58
NUP50-205ENST00000419387 ADCY3O60266 1144 aa11.45□□□□□ -0.58
NUP50-205ENST00000419387 SLC34A2O95436 690 aa11.45□□□□□ -0.58
NUP50-205ENST00000419387 FLT3LGP49771 235 aa11.45□□□□□ -0.58
NUP50-205ENST00000419387 MTMR2Q13614 643 aa11.45□□□□□ -0.58
NUP50-205ENST00000419387 SHROOM1Q2M3G4 852 aaPredicted RBP11.45□□□□□ -0.58
NUP50-205ENST00000419387 SLC9C2Q5TAH2 1124 aa11.45□□□□□ -0.58
NUP50-205ENST00000419387 TATDN1Q6P1N9 297 aa11.45□□□□□ -0.58
NUP50-205ENST00000419387 TTC6Q86TZ1 520 aa11.45□□□□□ -0.58
NUP50-205ENST00000419387 SLAIN1Q8ND83 568 aa11.45□□□□□ -0.58
NUP50-205ENST00000419387 NKX2-3Q8TAU0 364 aa11.45□□□□□ -0.58
NUP50-205ENST00000419387 COA7Q96BR5 231 aa11.45□□□□□ -0.58
NUP50-205ENST00000419387 DNAJC2Q99543 621 aaKnown RBP11.45□□□□□ -0.58
NUP50-205ENST00000419387 RIOK1Q9BRS2 568 aaKnown RBP11.45□□□□□ -0.58
NUP50-205ENST00000419387 BCL11AQ9H165 835 aa11.45□□□□□ -0.58
NUP50-205ENST00000419387 EHD4Q9H223 541 aa11.45□□□□□ -0.58
NUP50-205ENST00000419387 ZBTB21Q9ULJ3 1066 aa11.45□□□□□ -0.58
NUP50-205ENST00000419387 CDK5RAP2Q96SN8 1893 aa11.44□□□□□ -0.58
NUP50-205ENST00000419387 MAGEB6P1A0A0J9YX57 407 aa11.44□□□□□ -0.58
NUP50-205ENST00000419387 GOLIM4O00461 696 aa11.44□□□□□ -0.58
NUP50-205ENST00000419387 CCL5P13501 91 aa11.44□□□□□ -0.58
NUP50-205ENST00000419387 PDE6AP16499 860 aa11.44□□□□□ -0.58
NUP50-205ENST00000419387 HOXA7P31268 230 aaPredicted RBP11.44□□□□□ -0.58
NUP50-205ENST00000419387 IRF5Q13568 498 aa11.44□□□□□ -0.58
NUP50-205ENST00000419387 C20orf194Q5TEA3 1177 aa11.44□□□□□ -0.58
NUP50-205ENST00000419387 PXYLP1Q8TE99 480 aa11.44□□□□□ -0.58
NUP50-205ENST00000419387 P2RX7Q99572 595 aaKnown RBP11.44□□□□□ -0.58
NUP50-205ENST00000419387 RNF208Q9H0X6 261 aa11.44□□□□□ -0.58
NUP50-205ENST00000419387 SERPINB13Q9UIV8 391 aa11.44□□□□□ -0.58
NUP50-205ENST00000419387 FOCADQ5VW36 1801 aa11.44□□□□□ -0.58
NUP50-205ENST00000419387 ATAD5Q96QE3 1844 aa11.44□□□□□ -0.58
NUP50-205ENST00000419387 ZNF532Q9HCE3 1301 aa11.43□□□□□ -0.58
NUP50-205ENST00000419387 MGAMO43451 1857 aa11.43□□□□□ -0.58
NUP50-205ENST00000419387 TCRBV5S4A2TA0A5A2 114 aa11.43□□□□□ -0.58
NUP50-205ENST00000419387 GH2P01242 217 aa11.43□□□□□ -0.58
NUP50-205ENST00000419387 POLR3DP05423 398 aaPredicted RBP11.43□□□□□ -0.58
NUP50-205ENST00000419387 GJB1P08034 283 aa11.43□□□□□ -0.58
NUP50-205ENST00000419387 ATP5JP18859 108 aa11.43□□□□□ -0.58
NUP50-205ENST00000419387 GJA8P48165 433 aa11.43□□□□□ -0.58
NUP50-205ENST00000419387 PLCD1P51178 756 aa11.43□□□□□ -0.58
NUP50-205ENST00000419387 IRX3P78415 501 aaPredicted RBP11.43□□□□□ -0.58
NUP50-205ENST00000419387 CERKLQ49MI3 558 aaPredicted RBP11.43□□□□□ -0.58
NUP50-205ENST00000419387 CRNKL1Q9BZJ0 848 aaKnown RBP11.43□□□□□ -0.58
NUP50-205ENST00000419387 BOLA2Q9H3K6 86 aa11.43□□□□□ -0.58
NUP50-205ENST00000419387 PAG1Q9NWQ8 432 aa11.43□□□□□ -0.58
NUP50-205ENST00000419387 MORF4L1Q9UBU8 362 aa11.43□□□□□ -0.58
NUP50-205ENST00000419387 LOC285556D6RIA3 1793 aa11.43□□□□□ -0.58
NUP50-205ENST00000419387 CENPFP49454 3210 aa11.42□□□□□ -0.58
NUP50-205ENST00000419387 ELNP15502 786 aa11.42□□□□□ -0.58
NUP50-205ENST00000419387 USP17L2Q6R6M4 530 aa11.42□□□□□ -0.58
NUP50-205ENST00000419387 GCC1Q96CN9 775 aa11.42□□□□□ -0.58
NUP50-205ENST00000419387 SHISA4Q96DD7 197 aa11.42□□□□□ -0.58
NUP50-205ENST00000419387 EDC3Q96F86 508 aaKnown RBP11.42□□□□□ -0.58
NUP50-205ENST00000419387 YTHDC1Q96MU7 727 aaKnown RBP11.42□□□□□ -0.58
NUP50-205ENST00000419387 LRRCC1Q9C099 1032 aa11.42□□□□□ -0.58
NUP50-205ENST00000419387 CABP5Q9NP86 173 aa11.42□□□□□ -0.58
NUP50-205ENST00000419387 EMILIN3Q9NT22 766 aa11.42□□□□□ -0.58
NUP50-205ENST00000419387 MYH1P12882 1939 aa11.41□□□□□ -0.58
NUP50-205ENST00000419387 INHAP05111 366 aa11.41□□□□□ -0.58
NUP50-205ENST00000419387 SHMT1P34896 483 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms