RNA–Protein interactions for RNA: ENST00000416774.1

LINC01342-201, Transcript of long intergenic non-protein coding RNA 1342, humanhuman

TSL 1 (best) BASIC

Gene LINC01342, Length 1,620 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01342-201ENST00000416774 USP17L8P0C7I0 530 aa27.39■■□□□ 1.98
LINC01342-201ENST00000416774 GTF2IP78347 998 aa27.39■■□□□ 1.98
LINC01342-201ENST00000416774 CCDC93Q567U6 631 aa27.39■■□□□ 1.98
LINC01342-201ENST00000416774 CCDC144CPQ8IYA2 1237 aa27.39■■□□□ 1.98
LINC01342-201ENST00000416774 ZNF287Q9HBT7 754 aa27.39■■□□□ 1.98
LINC01342-201ENST00000416774 RTEL1Q9NZ71 1219 aa27.39■■□□□ 1.98
LINC01342-201ENST00000416774 DDX60LQ5H9U9 1706 aaKnown RBP27.39■■□□□ 1.98
LINC01342-201ENST00000416774 RIMBP2O15034 1052 aa27.38■■□□□ 1.97
LINC01342-201ENST00000416774 PPFIA3O75145 1194 aa27.38■■□□□ 1.97
LINC01342-201ENST00000416774 CYP2D6P10635 497 aa27.38■■□□□ 1.97
LINC01342-201ENST00000416774 KIF23Q02241 960 aaPredicted RBP27.38■■□□□ 1.97
LINC01342-201ENST00000416774 TRIM29Q14134 588 aa27.38■■□□□ 1.97
LINC01342-201ENST00000416774 CRACR2BQ8N4Y2 399 aaPredicted RBP27.38■■□□□ 1.97
LINC01342-201ENST00000416774 PHKBQ93100 1093 aa27.38■■□□□ 1.97
LINC01342-201ENST00000416774 DEXIO95424 95 aa27.38■■□□□ 1.97
LINC01342-201ENST00000416774 RASSF7Q02833 373 aa27.38■■□□□ 1.97
LINC01342-201ENST00000416774 KRT40Q6A162 431 aa27.38■■□□□ 1.97
LINC01342-201ENST00000416774 CC2D2BQ6DHV5 1058 aa27.38■■□□□ 1.97
LINC01342-201ENST00000416774 PODNQ7Z5L7 613 aa27.38■■□□□ 1.97
LINC01342-201ENST00000416774 NBPF11Q86T75 865 aa27.38■■□□□ 1.97
LINC01342-201ENST00000416774 TGFBRAP1Q8WUH2 860 aa27.38■■□□□ 1.97
LINC01342-201ENST00000416774 ANKS1AQ92625 1134 aa27.38■■□□□ 1.97
LINC01342-201ENST00000416774 SLC26A6Q9BXS9 759 aa27.38■■□□□ 1.97
LINC01342-201ENST00000416774 TSPY26PQ9H489 355 aa27.38■■□□□ 1.97
LINC01342-201ENST00000416774 NFKBIEO00221 500 aa27.37■■□□□ 1.97
LINC01342-201ENST00000416774 PRDM1O75626 825 aa27.37■■□□□ 1.97
LINC01342-201ENST00000416774 TEX11Q8IYF3 940 aa27.37■■□□□ 1.97
LINC01342-201ENST00000416774 USP28Q96RU2 1077 aa27.37■■□□□ 1.97
LINC01342-201ENST00000416774 RNF26Q9BY78 433 aaPredicted RBP27.37■■□□□ 1.97
LINC01342-201ENST00000416774 TCP11L1Q9NUJ3 509 aa27.37■■□□□ 1.97
LINC01342-201ENST00000416774 RHBDL3P58872 404 aa27.36■■□□□ 1.97
LINC01342-201ENST00000416774 FKBP1AP62942 108 aaKnown RBP27.36■■□□□ 1.97
LINC01342-201ENST00000416774 OTUD7BQ6GQQ9 843 aa27.36■■□□□ 1.97
LINC01342-201ENST00000416774 PGBD1Q96JS3 809 aa27.36■■□□□ 1.97
LINC01342-201ENST00000416774 DDX19AQ9NUU7 478 aaKnown RBP27.36■■□□□ 1.97
LINC01342-201ENST00000416774 POLR3EQ9NVU0 708 aa27.36■■□□□ 1.97
LINC01342-201ENST00000416774 YEATS4O95619 227 aa27.35■■□□□ 1.97
LINC01342-201ENST00000416774 MYSM1Q5VVJ2 828 aa27.35■■□□□ 1.97
LINC01342-201ENST00000416774 DGKHQ86XP1 1220 aa27.35■■□□□ 1.97
LINC01342-201ENST00000416774 RTKN2Q8IZC4 609 aa27.35■■□□□ 1.97
LINC01342-201ENST00000416774 NUP133Q8WUM0 1156 aa27.35■■□□□ 1.97
LINC01342-201ENST00000416774 MYH1P12882 1939 aa27.35■■□□□ 1.97
LINC01342-201ENST00000416774 MYH6P13533 1939 aa27.35■■□□□ 1.97
LINC01342-201ENST00000416774 TSPY2A6NKD2 308 aa27.34■■□□□ 1.97
LINC01342-201ENST00000416774 NASPP49321 788 aaPredicted RBP27.34■■□□□ 1.97
LINC01342-201ENST00000416774 TROAPQ12815 778 aa27.34■■□□□ 1.97
LINC01342-201ENST00000416774 G3V3G9 751 aa27.34■■□□□ 1.97
LINC01342-201ENST00000416774 POLR3DP05423 398 aaPredicted RBP27.34■■□□□ 1.97
LINC01342-201ENST00000416774 U2AF2P26368 475 aaKnown RBP eCLIP27.34■■□□□ 1.97
LINC01342-201ENST00000416774 GRIPAP1Q4V328 841 aa27.34■■□□□ 1.97
LINC01342-201ENST00000416774 DCAF8Q5TAQ9 597 aa27.34■■□□□ 1.97
LINC01342-201ENST00000416774 MAP3K14Q99558 947 aa27.34■■□□□ 1.97
LINC01342-201ENST00000416774 RBSNQ9H1K0 784 aa27.34■■□□□ 1.97
LINC01342-201ENST00000416774 DAGLAQ9Y4D2 1042 aa27.34■■□□□ 1.97
LINC01342-201ENST00000416774 MRIQ9BWK5 157 aa27.33■■□□□ 1.97
LINC01342-201ENST00000416774 TAOK3Q9H2K8 898 aa27.33■■□□□ 1.97
LINC01342-201ENST00000416774 HHIPL2Q6UWX4 724 aa27.32■■□□□ 1.96
LINC01342-201ENST00000416774 MAPKAPK5Q8IW41 473 aa27.32■■□□□ 1.96
LINC01342-201ENST00000416774 KCNG4Q8TDN1 519 aa27.32■■□□□ 1.96
LINC01342-201ENST00000416774 AIFM3Q96NN9 605 aa27.32■■□□□ 1.96
LINC01342-201ENST00000416774 MKNK2Q9HBH9 465 aa27.32■■□□□ 1.96
LINC01342-201ENST00000416774 PRPF3O43395 683 aaKnown RBP27.31■■□□□ 1.96
LINC01342-201ENST00000416774 EVX2Q03828 476 aa27.31■■□□□ 1.96
LINC01342-201ENST00000416774 BICD2Q8TD16 824 aa27.31■■□□□ 1.96
LINC01342-201ENST00000416774 ANP32BQ92688 251 aaKnown RBP27.31■■□□□ 1.96
LINC01342-201ENST00000416774 PANK2Q9BZ23 570 aa27.31■■□□□ 1.96
LINC01342-201ENST00000416774 FLT1P17948 1338 aa27.31■■□□□ 1.96
LINC01342-201ENST00000416774 KIF28PB7ZC32 967 aa27.3■■□□□ 1.96
LINC01342-201ENST00000416774 LIG1P18858 919 aa27.3■■□□□ 1.96
LINC01342-201ENST00000416774 PRELPP51888 382 aa27.3■■□□□ 1.96
LINC01342-201ENST00000416774 TFAP4Q01664 338 aa27.3■■□□□ 1.96
LINC01342-201ENST00000416774 AKAP17AQ02040 695 aaKnown RBP27.3■■□□□ 1.96
LINC01342-201ENST00000416774 SAFBQ15424 915 aaKnown RBP eCLIP27.3■■□□□ 1.96
LINC01342-201ENST00000416774 FAM47AQ5JRC9 791 aa27.3■■□□□ 1.96
LINC01342-201ENST00000416774 C9orf131Q5VYM1 1079 aa27.3■■□□□ 1.96
LINC01342-201ENST00000416774 C16orf86Q6ZW13 317 aa27.3■■□□□ 1.96
LINC01342-201ENST00000416774 ZNF444Q8N0Y2 327 aaPredicted RBP27.3■■□□□ 1.96
LINC01342-201ENST00000416774 NUP62CLQ9H1M0 184 aa27.3■■□□□ 1.96
LINC01342-201ENST00000416774 SNED1Q8TER0 1413 aa27.3■■□□□ 1.96
LINC01342-201ENST00000416774 FER1L6Q2WGJ9 1857 aa27.3■■□□□ 1.96
LINC01342-201ENST00000416774 LTBP3Q9NS15 1303 aa27.3■■□□□ 1.96
LINC01342-201ENST00000416774 FUT2Q10981 343 aa27.3■■□□□ 1.96
LINC01342-201ENST00000416774 DOK7Q18PE1 504 aa27.3■■□□□ 1.96
LINC01342-201ENST00000416774 CERS5Q8N5B7 392 aa27.3■■□□□ 1.96
LINC01342-201ENST00000416774 LINC00301Q8NCQ3 95 aa27.3■■□□□ 1.96
LINC01342-201ENST00000416774 SUPT20HQ8NEM7 779 aa27.3■■□□□ 1.96
LINC01342-201ENST00000416774 MMP1P03956 469 aa27.29■■□□□ 1.96
LINC01342-201ENST00000416774 XBP1P17861 261 aa27.29■■□□□ 1.96
LINC01342-201ENST00000416774 LMNB1P20700 586 aa27.29■■□□□ 1.96
LINC01342-201ENST00000416774 RCSD1Q6JBY9 416 aa27.29■■□□□ 1.96
LINC01342-201ENST00000416774 CTCFLQ8NI51 663 aaPredicted RBP27.29■■□□□ 1.96
LINC01342-201ENST00000416774 GJB4Q9NTQ9 266 aa27.29■■□□□ 1.96
LINC01342-201ENST00000416774 RNF181Q9P0P0 153 aa27.29■■□□□ 1.96
LINC01342-201ENST00000416774 TTF2Q9UNY4 1162 aaKnown RBP27.29■■□□□ 1.96
LINC01342-201ENST00000416774 A0A1W2PQ27 194 aa27.28■■□□□ 1.96
LINC01342-201ENST00000416774 A0A1W2PQ64 194 aa27.28■■□□□ 1.96
LINC01342-201ENST00000416774 A0A1W2PQD8 194 aa27.28■■□□□ 1.96
LINC01342-201ENST00000416774 YY1P25490 414 aa27.28■■□□□ 1.96
LINC01342-201ENST00000416774 CEBPZQ03701 1054 aaKnown RBP27.28■■□□□ 1.96
LINC01342-201ENST00000416774 GNL2Q13823 731 aaKnown RBP27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms