RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 FEZ1Q99689 392 aa19.03■□□□□ 0.64
SBDSP1-201ENST00000415772 PAGR1Q9BTK6 254 aa19.03■□□□□ 0.64
SBDSP1-201ENST00000415772 NBPF3Q9H094 633 aa19.03■□□□□ 0.64
SBDSP1-201ENST00000415772 STAP2Q9UGK3 403 aa19.03■□□□□ 0.64
SBDSP1-201ENST00000415772 PALD1Q9ULE6 856 aa19.03■□□□□ 0.64
SBDSP1-201ENST00000415772 TNNQ9UQP3 1299 aa19.03■□□□□ 0.64
SBDSP1-201ENST00000415772 MAPK4P31152 587 aa19.02■□□□□ 0.64
SBDSP1-201ENST00000415772 PPP4CP60510 307 aa19.02■□□□□ 0.64
SBDSP1-201ENST00000415772 HERVK_113P62684 666 aa19.02■□□□□ 0.64
SBDSP1-201ENST00000415772 RRP1BQ14684 758 aaKnown RBP19.02■□□□□ 0.64
SBDSP1-201ENST00000415772 TRMT44Q8IYL2 757 aaKnown RBP19.02■□□□□ 0.64
SBDSP1-201ENST00000415772 TMEM57Q8N5G2 664 aa19.02■□□□□ 0.64
SBDSP1-201ENST00000415772 DIS3LQ8TF46 1054 aaKnown RBP19.02■□□□□ 0.64
SBDSP1-201ENST00000415772 GTF3C2Q8WUA4 911 aaPredicted RBP19.02■□□□□ 0.64
SBDSP1-201ENST00000415772 P2RX7Q99572 595 aaKnown RBP19.02■□□□□ 0.64
SBDSP1-201ENST00000415772 IGSF3O75054 1194 aa19.01■□□□□ 0.63
SBDSP1-201ENST00000415772 IDH1O75874 414 aaKnown RBP19.01■□□□□ 0.63
SBDSP1-201ENST00000415772 CYP2E1P05181 493 aaPredicted RBP19.01■□□□□ 0.63
SBDSP1-201ENST00000415772 ZKSCAN1P17029 563 aaPredicted RBP19.01■□□□□ 0.63
SBDSP1-201ENST00000415772 CYP7A1P22680 504 aa19.01■□□□□ 0.63
SBDSP1-201ENST00000415772 HOXA7P31268 230 aaPredicted RBP19.01■□□□□ 0.63
SBDSP1-201ENST00000415772 ZAP70P43403 619 aa19.01■□□□□ 0.63
SBDSP1-201ENST00000415772 CERS3Q8IU89 383 aa19.01■□□□□ 0.63
SBDSP1-201ENST00000415772 C11orf49Q9H6J7 331 aa19.01■□□□□ 0.63
SBDSP1-201ENST00000415772 GJD2Q9UKL4 321 aa19.01■□□□□ 0.63
SBDSP1-201ENST00000415772 ZBTB21Q9ULJ3 1066 aa19.01■□□□□ 0.63
SBDSP1-201ENST00000415772 PRKAR2AP13861 404 aaKnown RBP19■□□□□ 0.63
SBDSP1-201ENST00000415772 USP17L2Q6R6M4 530 aa19■□□□□ 0.63
SBDSP1-201ENST00000415772 ITPRIPQ8IWB1 547 aa19■□□□□ 0.63
SBDSP1-201ENST00000415772 GLRX3O76003 335 aaKnown RBP18.99■□□□□ 0.63
SBDSP1-201ENST00000415772 RGS2P41220 211 aa18.99■□□□□ 0.63
SBDSP1-201ENST00000415772 ATP8B2P98198 1209 aa18.99■□□□□ 0.63
SBDSP1-201ENST00000415772 TRIM32Q13049 653 aa18.99■□□□□ 0.63
SBDSP1-201ENST00000415772 POLA2Q14181 598 aa18.99■□□□□ 0.63
SBDSP1-201ENST00000415772 ZYXQ15942 572 aaKnown RBP18.99■□□□□ 0.63
SBDSP1-201ENST00000415772 WDR78Q5VTH9 848 aa18.99■□□□□ 0.63
SBDSP1-201ENST00000415772 TRIB2Q92519 343 aa18.99■□□□□ 0.63
SBDSP1-201ENST00000415772 PRO3102Q9H379 93 aa18.99■□□□□ 0.63
SBDSP1-201ENST00000415772 ZMYND8Q9ULU4 1186 aaPredicted RBP18.99■□□□□ 0.63
SBDSP1-201ENST00000415772 ERVK-9P63128 1117 aa18.98■□□□□ 0.63
SBDSP1-201ENST00000415772 ERVK-24P63145 666 aa18.98■□□□□ 0.63
SBDSP1-201ENST00000415772 DYNLL1P63167 89 aaKnown RBP18.98■□□□□ 0.63
SBDSP1-201ENST00000415772 CCNA1P78396 465 aa18.98■□□□□ 0.63
SBDSP1-201ENST00000415772 ADGRA1Q86SQ6 560 aa18.98■□□□□ 0.63
SBDSP1-201ENST00000415772 SSH3Q8TE77 659 aa18.98■□□□□ 0.63
SBDSP1-201ENST00000415772 ZNF512BQ96KM6 892 aaPredicted RBP18.98■□□□□ 0.63
SBDSP1-201ENST00000415772 CCDC8Q9H0W5 538 aaPredicted RBP18.98■□□□□ 0.63
SBDSP1-201ENST00000415772 C1orf115Q9H7X2 142 aa18.98■□□□□ 0.63
SBDSP1-201ENST00000415772 GH2P01242 217 aa18.97■□□□□ 0.63
SBDSP1-201ENST00000415772 XRCC5P13010 732 aaKnown RBP18.97■□□□□ 0.63
SBDSP1-201ENST00000415772 MAP3K12Q12852 859 aa18.97■□□□□ 0.63
SBDSP1-201ENST00000415772 RAB3GAP1Q15042 981 aa18.97■□□□□ 0.63
SBDSP1-201ENST00000415772 PLEKHH3Q7Z736 793 aa18.97■□□□□ 0.63
SBDSP1-201ENST00000415772 TTC6Q86TZ1 520 aa18.97■□□□□ 0.63
SBDSP1-201ENST00000415772 MIGA1Q8NAN2 632 aa18.97■□□□□ 0.63
SBDSP1-201ENST00000415772 DNAJC18Q9H819 358 aa18.97■□□□□ 0.63
SBDSP1-201ENST00000415772 CABP5Q9NP86 173 aa18.97■□□□□ 0.63
SBDSP1-201ENST00000415772 PIH1D3Q9NQM4 214 aaKnown RBP18.97■□□□□ 0.63
SBDSP1-201ENST00000415772 SYN1P17600 705 aa18.96■□□□□ 0.63
SBDSP1-201ENST00000415772 USP14P54578 494 aa18.96■□□□□ 0.63
SBDSP1-201ENST00000415772 METTL16Q86W50 562 aaKnown RBP18.96■□□□□ 0.63
SBDSP1-201ENST00000415772 MAGEB6Q8N7X4 407 aa18.96■□□□□ 0.63
SBDSP1-201ENST00000415772 SLC17A8Q8NDX2 589 aa18.96■□□□□ 0.63
SBDSP1-201ENST00000415772 TXNRD2Q9NNW7 524 aa18.96■□□□□ 0.63
SBDSP1-201ENST00000415772 OGDHLQ9ULD0 1010 aa18.96■□□□□ 0.63
SBDSP1-201ENST00000415772 IVNS1ABPQ9Y6Y0 642 aa18.96■□□□□ 0.63
SBDSP1-201ENST00000415772 SIPA1L1O43166 1804 aa18.95■□□□□ 0.62
SBDSP1-201ENST00000415772 USP17L15C9J2P7 530 aa18.95■□□□□ 0.62
SBDSP1-201ENST00000415772 USP17L13C9JLJ4 530 aa18.95■□□□□ 0.62
SBDSP1-201ENST00000415772 USP17L11C9JVI0 530 aa18.95■□□□□ 0.62
SBDSP1-201ENST00000415772 USP17L18D6R9N7 530 aa18.95■□□□□ 0.62
SBDSP1-201ENST00000415772 USP17L22D6RA61 530 aa18.95■□□□□ 0.62
SBDSP1-201ENST00000415772 USP17L17D6RBQ6 530 aa18.95■□□□□ 0.62
SBDSP1-201ENST00000415772 USP17L19D6RCP7 530 aa18.95■□□□□ 0.62
SBDSP1-201ENST00000415772 USP17L20D6RJB6 530 aa18.95■□□□□ 0.62
SBDSP1-201ENST00000415772 PEX10O60683 326 aa18.95■□□□□ 0.62
SBDSP1-201ENST00000415772 JAG1P78504 1218 aa18.95■□□□□ 0.62
SBDSP1-201ENST00000415772 USP17L24Q0WX57 530 aa18.95■□□□□ 0.62
SBDSP1-201ENST00000415772 GPR142Q7Z601 462 aa18.95■□□□□ 0.62
SBDSP1-201ENST00000415772 APBA2Q99767 749 aa18.95■□□□□ 0.62
SBDSP1-201ENST00000415772 RBPJLQ9UBG7 517 aa18.95■□□□□ 0.62
SBDSP1-201ENST00000415772 SERPINB13Q9UIV8 391 aa18.95■□□□□ 0.62
SBDSP1-201ENST00000415772 DBNLQ9UJU6 430 aaKnown RBP18.95■□□□□ 0.62
SBDSP1-201ENST00000415772 DDX60LQ5H9U9 1706 aaKnown RBP18.94■□□□□ 0.62
SBDSP1-201ENST00000415772 CACNB2Q08289 660 aaPredicted RBP18.94■□□□□ 0.62
SBDSP1-201ENST00000415772 SHROOM1Q2M3G4 852 aaPredicted RBP18.94■□□□□ 0.62
SBDSP1-201ENST00000415772 CERKLQ49MI3 558 aaPredicted RBP18.94■□□□□ 0.62
SBDSP1-201ENST00000415772 ERC1Q8IUD2 1116 aa18.94■□□□□ 0.62
SBDSP1-201ENST00000415772 LRCH3Q96II8 777 aa18.94■□□□□ 0.62
SBDSP1-201ENST00000415772 PORCNQ9H237 461 aa18.94■□□□□ 0.62
SBDSP1-201ENST00000415772 EMILIN3Q9NT22 766 aa18.94■□□□□ 0.62
SBDSP1-201ENST00000415772 FOCADQ5VW36 1801 aa18.94■□□□□ 0.62
SBDSP1-201ENST00000415772 CEP290O15078 2479 aa18.94■□□□□ 0.62
SBDSP1-201ENST00000415772 TRIOBPQ9H2D6 2365 aa18.93■□□□□ 0.62
SBDSP1-201ENST00000415772 CDK5RAP2Q96SN8 1893 aa18.93■□□□□ 0.62
SBDSP1-201ENST00000415772 POLR3DP05423 398 aaPredicted RBP18.93■□□□□ 0.62
SBDSP1-201ENST00000415772 BMP8BP34820 402 aa18.93■□□□□ 0.62
SBDSP1-201ENST00000415772 ABCB5Q2M3G0 1257 aa18.93■□□□□ 0.62
SBDSP1-201ENST00000415772 MFSD14CQ5VZR4 134 aa18.93■□□□□ 0.62
SBDSP1-201ENST00000415772 GDF15Q99988 308 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms