RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 TCHPQ9BT92 498 aa15.31■□□□□ 0.04
SMARCA4-202ENST00000413806 ASIC2Q16515 512 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 INTS8Q75QN2 995 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 SEC62Q99442 399 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 CCDC87Q9NVE4 849 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 NFE2L3Q9Y4A8 694 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 CTDSPL2Q05D32 466 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 SECISBP2LQ93073 1101 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 ERVK-7P63135 1459 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 GNPATO15228 680 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 PFKFB2O60825 505 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 CCDC51Q96ER9 411 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 NOX5Q96PH1 765 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 ATP7BP35670 1465 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 FCHSD1Q86WN1 690 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 VEZTQ9HBM0 779 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 CETN3O15182 167 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 UFL1O94874 794 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 A1BGP04217 495 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 ATP5DP30049 168 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 GJC1P36383 396 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 ADCY7P51828 1080 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 APBB1IPQ7Z5R6 666 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 C8orf37Q96NL8 207 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 GPCPD1Q9NPB8 672 aa15.3■□□□□ 0.04
SMARCA4-202ENST00000413806 ZFYVE16Q7Z3T8 1539 aa15.29■□□□□ 0.04
SMARCA4-202ENST00000413806 C8orf74Q6P047 294 aa15.29■□□□□ 0.04
SMARCA4-202ENST00000413806 ANAPC4Q9UJX5 808 aa15.29■□□□□ 0.04
SMARCA4-202ENST00000413806 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMARCA4-202ENST00000413806 COMMD10Q9Y6G5 202 aa15.29■□□□□ 0.04
SMARCA4-202ENST00000413806 ERBB4Q15303 1308 aa15.29■□□□□ 0.04
SMARCA4-202ENST00000413806 SMIM23A6NLE4 172 aa15.29■□□□□ 0.04
SMARCA4-202ENST00000413806 RIMBP2O15034 1052 aa15.29■□□□□ 0.04
SMARCA4-202ENST00000413806 ZNF496Q96IT1 587 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-202ENST00000413806 TSKSQ9UJT2 592 aa15.29■□□□□ 0.04
SMARCA4-202ENST00000413806 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.29■□□□□ 0.043e-7■■□□□ 13.8
SMARCA4-202ENST00000413806 GIGYF1O75420 1035 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-202ENST00000413806 CIB2O75838 187 aa15.29■□□□□ 0.04
SMARCA4-202ENST00000413806 MYSM1Q5VVJ2 828 aa15.29■□□□□ 0.04
SMARCA4-202ENST00000413806 STAP2Q9UGK3 403 aa15.29■□□□□ 0.04
SMARCA4-202ENST00000413806 TNFAIP3P21580 790 aa15.29■□□□□ 0.04
SMARCA4-202ENST00000413806 AKNAD1Q5T1N1 836 aa15.29■□□□□ 0.04
SMARCA4-202ENST00000413806 PHKBQ93100 1093 aa15.29■□□□□ 0.04
SMARCA4-202ENST00000413806 GGA1Q9UJY5 639 aa15.29■□□□□ 0.04
SMARCA4-202ENST00000413806 WHAMMP3Q1A5X7 153 aa15.28■□□□□ 0.04
SMARCA4-202ENST00000413806 BEND3Q5T5X7 828 aa15.28■□□□□ 0.04
SMARCA4-202ENST00000413806 CSRNP2Q9H175 543 aa15.28■□□□□ 0.04
SMARCA4-202ENST00000413806 RABEP2Q9H5N1 569 aa15.28■□□□□ 0.04
SMARCA4-202ENST00000413806 ZNF853P0CG23 659 aa15.28■□□□□ 0.04
SMARCA4-202ENST00000413806 PLCB3Q01970 1234 aa15.28■□□□□ 0.04
SMARCA4-202ENST00000413806 NCBP1Q09161 790 aaKnown RBP15.28■□□□□ 0.04
SMARCA4-202ENST00000413806 CLUL1Q15846 466 aa15.28■□□□□ 0.04
SMARCA4-202ENST00000413806 CARD6Q9BX69 1037 aa15.28■□□□□ 0.04
SMARCA4-202ENST00000413806 SLC9C1Q4G0N8 1177 aa15.28■□□□□ 0.04
SMARCA4-202ENST00000413806 CCDC97Q96F63 343 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-202ENST00000413806 MBD5Q9P267 1494 aa15.28■□□□□ 0.04
SMARCA4-202ENST00000413806 HPDP32754 393 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-202ENST00000413806 TCIRG1Q13488 830 aa15.28■□□□□ 0.04
SMARCA4-202ENST00000413806 IFT20Q8IY31 132 aa15.28■□□□□ 0.04
SMARCA4-202ENST00000413806 NELFBQ8WX92 580 aa15.28■□□□□ 0.04
SMARCA4-202ENST00000413806 HAUS7Q99871 368 aa15.28■□□□□ 0.04
SMARCA4-202ENST00000413806 LRWD1Q9UFC0 647 aa15.28■□□□□ 0.04
SMARCA4-202ENST00000413806 JAG2Q9Y219 1238 aa15.28■□□□□ 0.04
SMARCA4-202ENST00000413806 UBLCP1Q8WVY7 318 aaPredicted RBP15.27■□□□□ 0.04
SMARCA4-202ENST00000413806 NUCKS1Q9H1E3 243 aaKnown RBP15.27■□□□□ 0.04
SMARCA4-202ENST00000413806 ARHGEF10LQ9HCE6 1279 aa15.27■□□□□ 0.04
SMARCA4-202ENST00000413806 EXOC7Q9UPT5 735 aa15.27■□□□□ 0.04
SMARCA4-202ENST00000413806 VIMP08670 466 aaKnown RBP15.27■□□□□ 0.04
SMARCA4-202ENST00000413806 WDR44Q5JSH3 913 aa15.27■□□□□ 0.04
SMARCA4-202ENST00000413806 CEP85LQ5SZL2 805 aa15.27■□□□□ 0.04
SMARCA4-202ENST00000413806 SEPT14Q6ZU15 432 aa15.27■□□□□ 0.04
SMARCA4-202ENST00000413806 KCNK9Q9NPC2 374 aa15.27■□□□□ 0.04
SMARCA4-202ENST00000413806 ARPP21Q9UBL0 812 aaPredicted RBP15.27■□□□□ 0.04
SMARCA4-202ENST00000413806 MTMR6Q9Y217 621 aa15.27■□□□□ 0.04
SMARCA4-202ENST00000413806 TXKP42681 527 aa15.27■□□□□ 0.04
SMARCA4-202ENST00000413806 ORAI2Q96SN7 254 aa15.27■□□□□ 0.04
SMARCA4-202ENST00000413806 OSBPL3Q9H4L5 887 aa15.27■□□□□ 0.04
SMARCA4-202ENST00000413806 SMTNP53814 917 aa15.27■□□□□ 0.03
SMARCA4-202ENST00000413806 CCDC38Q502W7 563 aa15.27■□□□□ 0.03
SMARCA4-202ENST00000413806 RPUSD2Q8IZ73 545 aaKnown RBP15.27■□□□□ 0.03
SMARCA4-202ENST00000413806 MICAL1Q8TDZ2 1067 aa15.27■□□□□ 0.03
SMARCA4-202ENST00000413806 ZMYM6O95789 1325 aa15.27■□□□□ 0.03
SMARCA4-202ENST00000413806 PTH1RQ03431 593 aa15.27■□□□□ 0.03
SMARCA4-202ENST00000413806 CROCCP2Q86T23 111 aa15.27■□□□□ 0.03
SMARCA4-202ENST00000413806 IL17REQ8NFR9 667 aa15.27■□□□□ 0.03
SMARCA4-202ENST00000413806 MYL10Q9BUA6 226 aa15.27■□□□□ 0.03
SMARCA4-202ENST00000413806 AATFQ9NY61 560 aaKnown RBP eCLIP15.27■□□□□ 0.03
SMARCA4-202ENST00000413806 KIAA1468Q9P260 1216 aa15.27■□□□□ 0.03
SMARCA4-202ENST00000413806 A0A0D9SFI3 127 aa15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 TLDC2A0PJX2 215 aa15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 ACTN4O43707 911 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 PPARAQ07869 468 aa15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 PLS1Q14651 629 aa15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 GPR161Q8N6U8 529 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 MLH3Q9UHC1 1453 aa15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 ZNF500O60304 480 aaPredicted RBP15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 SNX29Q8TEQ0 813 aa15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 TAB2Q9NYJ8 693 aa15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 CAPN7Q9Y6W3 813 aa15.26■□□□□ 0.03
SMARCA4-202ENST00000413806 PABPN1LA6NDY0 278 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms