RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 HID1Q8IV36 788 aa7.54□□□□□ -1.2
CLK1-203ENST00000409769 MFSD4AQ8N468 514 aa7.54□□□□□ -1.2
CLK1-203ENST00000409769 TPX2Q9ULW0 747 aaKnown RBP7.54□□□□□ -1.2
CLK1-203ENST00000409769 TTF2Q9UNY4 1162 aaKnown RBP7.54□□□□□ -1.2
CLK1-203ENST00000409769 CTNND2Q9UQB3 1225 aa7.54□□□□□ -1.2
CLK1-203ENST00000409769 LRRC10BA6NIK2 292 aa7.53□□□□□ -1.2
CLK1-203ENST00000409769 SLITRK5O94991 958 aa7.53□□□□□ -1.2
CLK1-203ENST00000409769 LDHBP07195 334 aaKnown RBP7.53□□□□□ -1.2
CLK1-203ENST00000409769 LMNB1P20700 586 aa7.53□□□□□ -1.2
CLK1-203ENST00000409769 CYP7A1P22680 504 aa7.53□□□□□ -1.2
CLK1-203ENST00000409769 INPP5AQ14642 412 aa7.53□□□□□ -1.2
CLK1-203ENST00000409769 RASIP1Q5U651 963 aa7.53□□□□□ -1.2
CLK1-203ENST00000409769 THAP5Q7Z6K1 395 aa7.53□□□□□ -1.2
CLK1-203ENST00000409769 GAL3ST3Q96A11 431 aa7.53□□□□□ -1.2
CLK1-203ENST00000409769 PLPPR2Q96GM1 343 aa7.53□□□□□ -1.2
CLK1-203ENST00000409769 WWC3Q9ULE0 1092 aa7.53□□□□□ -1.2
CLK1-203ENST00000409769 EIF4BP23588 611 aaKnown RBP7.52□□□□□ -1.21
CLK1-203ENST00000409769 GNA15P30679 374 aa7.52□□□□□ -1.21
CLK1-203ENST00000409769 ETF1P62495 437 aaKnown RBP7.52□□□□□ -1.21
CLK1-203ENST00000409769 SLBPQ14493 270 aaKnown RBP eCLIP7.52□□□□□ -1.21
CLK1-203ENST00000409769 TTBK2Q6IQ55 1244 aa7.52□□□□□ -1.21
CLK1-203ENST00000409769 SETDB2Q96T68 719 aa7.52□□□□□ -1.21
CLK1-203ENST00000409769 MIPEPQ99797 713 aa7.52□□□□□ -1.21
CLK1-203ENST00000409769 SEMA3GQ9NS98 782 aa7.52□□□□□ -1.21
CLK1-203ENST00000409769 NACADO15069 1562 aa7.51□□□□□ -1.21
CLK1-203ENST00000409769 KIR3DL1P43629 444 aa7.51□□□□□ -1.21
CLK1-203ENST00000409769 KRTAP19-4Q3LI73 84 aa7.51□□□□□ -1.21
CLK1-203ENST00000409769 WIPI1Q5MNZ9 446 aaPredicted RBP7.51□□□□□ -1.21
CLK1-203ENST00000409769 LCE1DQ5T752 114 aa7.51□□□□□ -1.21
CLK1-203ENST00000409769 DIEXFQ68CQ4 756 aaKnown RBP7.51□□□□□ -1.21
CLK1-203ENST00000409769 PPP1R16BQ96T49 567 aa7.51□□□□□ -1.21
CLK1-203ENST00000409769 PRDM7Q9NQW5 492 aa7.51□□□□□ -1.21
CLK1-203ENST00000409769 CST3P01034 146 aaPredicted RBP7.5□□□□□ -1.21
CLK1-203ENST00000409769 GDNFP39905 211 aa7.5□□□□□ -1.21
CLK1-203ENST00000409769 MFAP1P55081 439 aaKnown RBP7.5□□□□□ -1.21
CLK1-203ENST00000409769 MESP2Q0VG99 397 aa7.5□□□□□ -1.21
CLK1-203ENST00000409769 LETMD1Q6P1Q0 360 aa7.5□□□□□ -1.21
CLK1-203ENST00000409769 HSPA12BQ96MM6 686 aa7.5□□□□□ -1.21
CLK1-203ENST00000409769 CARS2Q9HA77 564 aaKnown RBP7.5□□□□□ -1.21
CLK1-203ENST00000409769 FBRSQ9HAH7 460 aa7.5□□□□□ -1.21
CLK1-203ENST00000409769 GLI1P08151 1106 aa7.49□□□□□ -1.21
CLK1-203ENST00000409769 RLBP1P12271 317 aa7.49□□□□□ -1.21
CLK1-203ENST00000409769 PTPN11Q06124 597 aaPredicted RBP7.49□□□□□ -1.21
CLK1-203ENST00000409769 ZNF124Q15973 351 aa7.49□□□□□ -1.21
CLK1-203ENST00000409769 KIRREL1Q96J84 757 aa7.49□□□□□ -1.21
CLK1-203ENST00000409769 CAPN6Q9Y6Q1 641 aa7.49□□□□□ -1.21
CLK1-203ENST00000409769 ZNF503-AS2A6NEH8 195 aa7.48□□□□□ -1.21
CLK1-203ENST00000409769 CCDC85BQ15834 202 aaPredicted RBP7.48□□□□□ -1.21
CLK1-203ENST00000409769 MLANAQ16655 118 aa7.48□□□□□ -1.21
CLK1-203ENST00000409769 ATP13A1Q9HD20 1204 aa7.48□□□□□ -1.21
CLK1-203ENST00000409769 ST14Q9Y5Y6 855 aa7.48□□□□□ -1.21
CLK1-203ENST00000409769 PDE4BQ07343 736 aa7.47□□□□□ -1.21
CLK1-203ENST00000409769 NKG7Q16617 165 aa7.47□□□□□ -1.21
CLK1-203ENST00000409769 CDKAL1Q5VV42 579 aa7.47□□□□□ -1.21
CLK1-203ENST00000409769 PRAMEF13Q5VWM6 474 aa7.47□□□□□ -1.21
CLK1-203ENST00000409769 MRPL41Q8IXM3 137 aaKnown RBP7.47□□□□□ -1.21
CLK1-203ENST00000409769 PIWIL2Q8TC59 973 aaKnown RBP7.47□□□□□ -1.21
CLK1-203ENST00000409769 DUSP9Q99956 384 aaKnown RBP7.47□□□□□ -1.21
CLK1-203ENST00000409769 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.47□□□□□ -1.21
CLK1-203ENST00000409769 AK5Q9Y6K8 562 aa7.47□□□□□ -1.21
CLK1-203ENST00000409769 PRR33A8MZF0 331 aa7.46□□□□□ -1.22
CLK1-203ENST00000409769 H3BS24 57 aa7.46□□□□□ -1.22
CLK1-203ENST00000409769 GRK4P32298 578 aa7.46□□□□□ -1.22
CLK1-203ENST00000409769 DAB2P98082 770 aa7.46□□□□□ -1.22
CLK1-203ENST00000409769 TMEM67Q5HYA8 995 aa7.46□□□□□ -1.22
CLK1-203ENST00000409769 SLC6A19Q695T7 634 aa7.46□□□□□ -1.22
CLK1-203ENST00000409769 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.46□□□□□ -1.22
CLK1-203ENST00000409769 AGMOQ6ZNB7 445 aa7.46□□□□□ -1.22
CLK1-203ENST00000409769 TMC4Q7Z404 712 aa7.46□□□□□ -1.22
CLK1-203ENST00000409769 MIR1-1HGQ9H1L0 117 aa7.46□□□□□ -1.22
CLK1-203ENST00000409769 RB1CC1Q8TDY2 1594 aa7.46□□□□□ -1.22
CLK1-203ENST00000409769 GFRA2O00451 464 aa7.45□□□□□ -1.22
CLK1-203ENST00000409769 TSPAN15O95858 294 aa7.45□□□□□ -1.22
CLK1-203ENST00000409769 RAC2P15153 192 aa7.45□□□□□ -1.22
CLK1-203ENST00000409769 ITGAEP38570 1179 aa7.45□□□□□ -1.22
CLK1-203ENST00000409769 ETV3P41162 512 aa7.45□□□□□ -1.22
CLK1-203ENST00000409769 MPZL3Q6UWV2 235 aa7.45□□□□□ -1.22
CLK1-203ENST00000409769 TMPRSS7Q7RTY8 843 aa7.45□□□□□ -1.22
CLK1-203ENST00000409769 TOX2Q96NM4 488 aa7.45□□□□□ -1.22
CLK1-203ENST00000409769 ALPK1Q96QP1 1244 aa7.45□□□□□ -1.22
CLK1-203ENST00000409769 PARP2Q9UGN5 583 aa7.45□□□□□ -1.22
CLK1-203ENST00000409769 CBX7O95931 251 aa7.44□□□□□ -1.22
CLK1-203ENST00000409769 RAP1GAPP47736 663 aa7.44□□□□□ -1.22
CLK1-203ENST00000409769 LIG3P49916 1009 aa7.44□□□□□ -1.22
CLK1-203ENST00000409769 FBLN7Q53RD9 439 aa7.44□□□□□ -1.22
CLK1-203ENST00000409769 ADAM30Q9UKF2 790 aa7.44□□□□□ -1.22
CLK1-203ENST00000409769 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.43□□□□□ -1.22
CLK1-203ENST00000409769 PGRP06401 933 aa7.43□□□□□ -1.22
CLK1-203ENST00000409769 RPL6Q02878 288 aaKnown RBP7.43□□□□□ -1.22
CLK1-203ENST00000409769 TSNAXIP1Q2TAA8 658 aa7.43□□□□□ -1.22
CLK1-203ENST00000409769 ZNF326Q5BKZ1 582 aaKnown RBP7.43□□□□□ -1.22
CLK1-203ENST00000409769 FYB2Q5VWT5 728 aa7.43□□□□□ -1.22
CLK1-203ENST00000409769 RIN3Q8TB24 985 aa7.43□□□□□ -1.22
CLK1-203ENST00000409769 UBE2FQ969M7 185 aa7.43□□□□□ -1.22
CLK1-203ENST00000409769 LIN37Q96GY3 246 aaPredicted RBP7.43□□□□□ -1.22
CLK1-203ENST00000409769 BCL2L13Q9BXK5 485 aa7.43□□□□□ -1.22
CLK1-203ENST00000409769 TRIT1Q9H3H1 467 aaKnown RBP7.43□□□□□ -1.22
CLK1-203ENST00000409769 C19orf73Q9NVV2 129 aa7.43□□□□□ -1.22
CLK1-203ENST00000409769 XPCQ01831 940 aaPredicted RBP7.42□□□□□ -1.22
CLK1-203ENST00000409769 SEPT6Q14141 434 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 683.6 ms