RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 OSBPP22059 807 aa17.59■□□□□ 0.41
NIF3L1-205ENST00000409588 GCLCP48506 637 aaPredicted RBP17.59■□□□□ 0.41
NIF3L1-205ENST00000409588 FCGRTP55899 365 aa17.59■□□□□ 0.41
NIF3L1-205ENST00000409588 TATDN1Q6P1N9 297 aa17.59■□□□□ 0.41
NIF3L1-205ENST00000409588 SMCR8Q8TEV9 937 aaPredicted RBP17.59■□□□□ 0.41
NIF3L1-205ENST00000409588 DCBLD2Q96PD2 775 aa17.59■□□□□ 0.41
NIF3L1-205ENST00000409588 DNAJC2Q99543 621 aaKnown RBP17.59■□□□□ 0.41
NIF3L1-205ENST00000409588 TMEM106CQ9BVX2 250 aa17.59■□□□□ 0.41
NIF3L1-205ENST00000409588 SRRDQ9UH36 339 aa17.59■□□□□ 0.41
NIF3L1-205ENST00000409588 NDUFB9Q9Y6M9 179 aa17.59■□□□□ 0.41
NIF3L1-205ENST00000409588 SLURP2P0DP57 97 aa17.58■□□□□ 0.4
NIF3L1-205ENST00000409588 CYP2C8P10632 490 aa17.58■□□□□ 0.4
NIF3L1-205ENST00000409588 BACE1P56817 501 aa17.58■□□□□ 0.4
NIF3L1-205ENST00000409588 GPATCH3Q96I76 525 aa17.58■□□□□ 0.4
NIF3L1-205ENST00000409588 TMOD4Q9NZQ9 345 aa17.58■□□□□ 0.4
NIF3L1-205ENST00000409588 DOCK1Q14185 1865 aa17.58■□□□□ 0.4
NIF3L1-205ENST00000409588 ZNF532Q9HCE3 1301 aa17.57■□□□□ 0.4
NIF3L1-205ENST00000409588 USP17L10C9JJH3 530 aa17.57■□□□□ 0.4
NIF3L1-205ENST00000409588 CAPN2P17655 700 aa17.57■□□□□ 0.4
NIF3L1-205ENST00000409588 HOXA7P31268 230 aaPredicted RBP17.57■□□□□ 0.4
NIF3L1-205ENST00000409588 AAMPQ13685 434 aa17.57■□□□□ 0.4
NIF3L1-205ENST00000409588 UBE3CQ15386 1083 aa17.57■□□□□ 0.4
NIF3L1-205ENST00000409588 ZNF333Q96JL9 665 aa17.57■□□□□ 0.4
NIF3L1-205ENST00000409588 BOLA2Q9H3K6 86 aa17.57■□□□□ 0.4
NIF3L1-205ENST00000409588 ATP8A2Q9NTI2 1148 aa17.57■□□□□ 0.4
NIF3L1-205ENST00000409588 ECHDC1Q9NTX5 307 aa17.57■□□□□ 0.4
NIF3L1-205ENST00000409588 SAP30BPQ9UHR5 308 aaKnown RBP17.57■□□□□ 0.4
NIF3L1-205ENST00000409588 PTCH2Q9Y6C5 1203 aa17.57■□□□□ 0.4
NIF3L1-205ENST00000409588 TCRBV5S4A2TA0A5A2 114 aa17.56■□□□□ 0.4
NIF3L1-205ENST00000409588 POLR3DP05423 398 aaPredicted RBP17.56■□□□□ 0.4
NIF3L1-205ENST00000409588 HMGCS2P54868 508 aa17.56■□□□□ 0.4
NIF3L1-205ENST00000409588 CAP1Q01518 475 aa17.56■□□□□ 0.4
NIF3L1-205ENST00000409588 RRP1BQ14684 758 aaKnown RBP17.56■□□□□ 0.4
NIF3L1-205ENST00000409588 TRIM47Q96LD4 638 aa17.56■□□□□ 0.4
NIF3L1-205ENST00000409588 ARHGAP39Q9C0H5 1083 aa17.56■□□□□ 0.4
NIF3L1-205ENST00000409588 DNAJC18Q9H819 358 aa17.56■□□□□ 0.4
NIF3L1-205ENST00000409588 CABP5Q9NP86 173 aa17.56■□□□□ 0.4
NIF3L1-205ENST00000409588 ADD2P35612 726 aa17.55■□□□□ 0.4
NIF3L1-205ENST00000409588 FAM110CQ1W6H9 321 aa17.55■□□□□ 0.4
NIF3L1-205ENST00000409588 CERKLQ49MI3 558 aaPredicted RBP17.55■□□□□ 0.4
NIF3L1-205ENST00000409588 RAET1EQ8TD07 263 aa17.55■□□□□ 0.4
NIF3L1-205ENST00000409588 GTF3C2Q8WUA4 911 aaPredicted RBP17.55■□□□□ 0.4
NIF3L1-205ENST00000409588 DDRGK1Q96HY6 314 aa17.55■□□□□ 0.4
NIF3L1-205ENST00000409588 ZBTB21Q9ULJ3 1066 aa17.55■□□□□ 0.4
NIF3L1-205ENST00000409588 FOCADQ5VW36 1801 aa17.55■□□□□ 0.4
NIF3L1-205ENST00000409588 USP14P54578 494 aa17.54■□□□□ 0.4
NIF3L1-205ENST00000409588 LRRFIP1Q32MZ4 808 aaKnown RBP17.54■□□□□ 0.4
NIF3L1-205ENST00000409588 TREML2Q5T2D2 321 aa17.54■□□□□ 0.4
NIF3L1-205ENST00000409588 AMOTL1Q8IY63 956 aa17.54■□□□□ 0.4
NIF3L1-205ENST00000409588 MCM9Q9NXL9 1143 aa17.54■□□□□ 0.4
NIF3L1-205ENST00000409588 MYO5AQ9Y4I1 1855 aaKnown RBP17.54■□□□□ 0.4
NIF3L1-205ENST00000409588 PHIPQ8WWQ0 1821 aa17.54■□□□□ 0.4
NIF3L1-205ENST00000409588 HTTP42858 3142 aa17.53■□□□□ 0.4
NIF3L1-205ENST00000409588 RRP1P56182 461 aaKnown RBP17.53■□□□□ 0.4
NIF3L1-205ENST00000409588 MTMR2Q13614 643 aa17.53■□□□□ 0.4
NIF3L1-205ENST00000409588 ABCB5Q2M3G0 1257 aa17.53■□□□□ 0.4
NIF3L1-205ENST00000409588 USP17L2Q6R6M4 530 aa17.53■□□□□ 0.4
NIF3L1-205ENST00000409588 COA7Q96BR5 231 aa17.53■□□□□ 0.4
NIF3L1-205ENST00000409588 DCP1AQ9NPI6 582 aaPredicted RBP17.53■□□□□ 0.4
NIF3L1-205ENST00000409588 SWAP70Q9UH65 585 aa17.53■□□□□ 0.4
NIF3L1-205ENST00000409588 MYPNQ86TC9 1320 aa17.52■□□□□ 0.4
NIF3L1-205ENST00000409588 GH2P01242 217 aa17.52■□□□□ 0.4
NIF3L1-205ENST00000409588 GRK4P32298 578 aa17.52■□□□□ 0.4
NIF3L1-205ENST00000409588 IRX3P78415 501 aaPredicted RBP17.52■□□□□ 0.4
NIF3L1-205ENST00000409588 GABPAQ06546 454 aa17.52■□□□□ 0.4
NIF3L1-205ENST00000409588 IRF5Q13568 498 aa17.52■□□□□ 0.4
NIF3L1-205ENST00000409588 CCDC84Q86UT8 332 aaPredicted RBP17.52■□□□□ 0.4
NIF3L1-205ENST00000409588 ANKRD13CQ8N6S4 541 aa17.52■□□□□ 0.4
NIF3L1-205ENST00000409588 SLAIN1Q8ND83 568 aa17.52■□□□□ 0.4
NIF3L1-205ENST00000409588 NKX2-3Q8TAU0 364 aa17.52■□□□□ 0.4
NIF3L1-205ENST00000409588 PXYLP1Q8TE99 480 aa17.52■□□□□ 0.4
NIF3L1-205ENST00000409588 BCL11AQ9H165 835 aa17.52■□□□□ 0.4
NIF3L1-205ENST00000409588 ASCC2Q9H1I8 757 aaPredicted RBP17.52■□□□□ 0.4
NIF3L1-205ENST00000409588 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.52■□□□□ 0.4
NIF3L1-205ENST00000409588 TTC41PQ6P2S7 1318 aa17.51■□□□□ 0.39
NIF3L1-205ENST00000409588 TNPO2O14787 897 aaKnown RBP17.51■□□□□ 0.39
NIF3L1-205ENST00000409588 ERC2O15083 957 aa17.51■□□□□ 0.39
NIF3L1-205ENST00000409588 GDF11O95390 407 aa17.51■□□□□ 0.39
NIF3L1-205ENST00000409588 ZFYP08048 801 aaPredicted RBP17.51■□□□□ 0.39
NIF3L1-205ENST00000409588 CTGFP29279 349 aa17.51■□□□□ 0.39
NIF3L1-205ENST00000409588 PLCD1P51178 756 aa17.51■□□□□ 0.39
NIF3L1-205ENST00000409588 UBXN2AP68543 259 aa17.51■□□□□ 0.39
NIF3L1-205ENST00000409588 SLC4A8Q2Y0W8 1093 aa17.51■□□□□ 0.39
NIF3L1-205ENST00000409588 C12orf42Q96LP6 360 aa17.51■□□□□ 0.39
NIF3L1-205ENST00000409588 CDK5RAP2Q96SN8 1893 aa17.51■□□□□ 0.39
NIF3L1-205ENST00000409588 MORF4L1Q9UBU8 362 aa17.51■□□□□ 0.39
NIF3L1-205ENST00000409588 ZBTB47Q9UFB7 747 aaPredicted RBP17.51■□□□□ 0.39
NIF3L1-205ENST00000409588 PTPRFP10586 1907 aa17.51■□□□□ 0.39
NIF3L1-205ENST00000409588 SMARCA5O60264 1052 aaPredicted RBP17.5■□□□□ 0.39
NIF3L1-205ENST00000409588 JAG1P78504 1218 aa17.5■□□□□ 0.39
NIF3L1-205ENST00000409588 LCORLQ8N3X6 602 aa17.5■□□□□ 0.39
NIF3L1-205ENST00000409588 EDC3Q96F86 508 aaKnown RBP17.5■□□□□ 0.39
NIF3L1-205ENST00000409588 CCDC17Q96LX7 622 aa17.5■□□□□ 0.39
NIF3L1-205ENST00000409588 KIAA1683Q9H0B3 1180 aa17.5■□□□□ 0.39
NIF3L1-205ENST00000409588 TNRC18O15417 2968 aaPredicted RBP17.5■□□□□ 0.39
NIF3L1-205ENST00000409588 MYH1P12882 1939 aa17.49■□□□□ 0.39
NIF3L1-205ENST00000409588 POTEFA5A3E0 1075 aa17.49■□□□□ 0.39
NIF3L1-205ENST00000409588 SHMT1P34896 483 aa17.49■□□□□ 0.39
NIF3L1-205ENST00000409588 RAB3GAP1Q15042 981 aa17.49■□□□□ 0.39
NIF3L1-205ENST00000409588 GIMAP6Q6P9H5 292 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms