RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 TUBB2BQ9BVA1 445 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 NR1I2O75469 434 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 CYP19A1P11511 503 aaPredicted RBP6.6□□□□□ -1.35
HDAC9-203ENST00000406072 MARCKSP29966 332 aaPredicted RBP6.6□□□□□ -1.35
HDAC9-203ENST00000406072 CASP7P55210 303 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 RABL6Q3YEC7 729 aaPredicted RBP6.6□□□□□ -1.35
HDAC9-203ENST00000406072 CCDC129Q6ZRS4 1044 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 CLEC17AQ6ZS10 378 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 TDRD7Q8NHU6 1098 aaKnown RBP6.6□□□□□ -1.35
HDAC9-203ENST00000406072 DESI2Q9BSY9 194 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 METTL22Q9BUU2 404 aaPredicted RBP6.6□□□□□ -1.35
HDAC9-203ENST00000406072 BOLA2Q9H3K6 86 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 PPP1R12AO14974 1030 aaPredicted RBP6.6□□□□□ -1.35
HDAC9-203ENST00000406072 PSMD2Q13200 908 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 CCDC38Q502W7 563 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 FBXW10Q5XX13 1052 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 TTC6Q86TZ1 520 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 PRPF38AQ8NAV1 312 aaKnown RBP6.6□□□□□ -1.35
HDAC9-203ENST00000406072 LINS1Q8NG48 757 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 SPDL1Q96EA4 605 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 SH3GL3Q99963 347 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 UBAC1Q9BSL1 405 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 LRRC2Q9BYS8 371 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 KCNF1Q9H3M0 494 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 SAMD15Q9P1V8 674 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 TLDC2A0PJX2 215 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 USP27XA6NNY8 438 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 AKR1B15C9JRZ8 316 aaPredicted RBP6.6□□□□□ -1.35
HDAC9-203ENST00000406072 GCOM1H8Y6P7 765 aaPredicted RBP6.6□□□□□ -1.35
HDAC9-203ENST00000406072 KCNQ3O43525 872 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 KRT86O43790 486 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 MYZAPP0CAP1 466 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 ELF1P32519 619 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 IRX1P78414 480 aaPredicted RBP6.6□□□□□ -1.35
HDAC9-203ENST00000406072 ATP11AP98196 1134 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 LRRC23Q53EV4 343 aaPredicted RBP6.6□□□□□ -1.35
HDAC9-203ENST00000406072 SLC27A3Q5K4L6 730 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 SPATS2Q86XZ4 545 aaKnown RBP6.6□□□□□ -1.35
HDAC9-203ENST00000406072 CCDC170Q8IYT3 715 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 KCNG4Q8TDN1 519 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 HINFPQ9BQA5 517 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 ISCA1Q9BUE6 129 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 NSRP1Q9H0G5 558 aaKnown RBP6.6□□□□□ -1.35
HDAC9-203ENST00000406072 PPP2R2CQ9Y2T4 447 aa6.6□□□□□ -1.35
HDAC9-203ENST00000406072 PALLDQ8WX93 1383 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 HGSO14964 777 aaPredicted RBP6.59□□□□□ -1.35
HDAC9-203ENST00000406072 GSPT1P15170 499 aaKnown RBP6.59□□□□□ -1.35
HDAC9-203ENST00000406072 CCDC96Q2M329 555 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 CEP120Q8N960 986 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 DOCK2Q92608 1830 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 MAST2Q6P0Q8 1798 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 A0A087WZG4 1122 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 AKR1B10O60218 316 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 AIMP1Q12904 312 aaKnown RBP6.59□□□□□ -1.35
HDAC9-203ENST00000406072 CASP8Q14790 479 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 CCDC122Q5T0U0 273 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 WWC2Q6AWC2 1192 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 SEPT14Q6ZU15 432 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 TRIM22Q8IYM9 498 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 SELENOSQ9BQE4 189 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 TRIM4Q9C037 500 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 YIPF3Q9GZM5 350 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 VCXQ9H320 206 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 STRN4Q9NRL3 753 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 CHPF2Q9P2E5 772 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 ABCC12Q96J65 1359 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 SALL3Q9BXA9 1300 aa6.59□□□□□ -1.35
HDAC9-203ENST00000406072 LRRD1A4D1F6 860 aa6.59□□□□□ -1.36
HDAC9-203ENST00000406072 SPTLC2O15270 562 aa6.59□□□□□ -1.36
HDAC9-203ENST00000406072 VIMP08670 466 aaKnown RBP6.59□□□□□ -1.36
HDAC9-203ENST00000406072 RANBP1P43487 201 aa6.59□□□□□ -1.36
HDAC9-203ENST00000406072 ADKP55263 362 aaKnown RBP6.59□□□□□ -1.36
HDAC9-203ENST00000406072 RBM6P78332 1123 aaKnown RBP6.59□□□□□ -1.36
HDAC9-203ENST00000406072 TDRD12Q587J7 1177 aaKnown RBP6.59□□□□□ -1.36
HDAC9-203ENST00000406072 CDC37L1Q7L3B6 337 aa6.59□□□□□ -1.36
HDAC9-203ENST00000406072 SRGAP1Q7Z6B7 1085 aa6.59□□□□□ -1.36
HDAC9-203ENST00000406072 OSBPL3Q9H4L5 887 aa6.59□□□□□ -1.36
HDAC9-203ENST00000406072 MIS18AQ9NYP9 233 aa6.59□□□□□ -1.36
HDAC9-203ENST00000406072 RBM8AQ9Y5S9 174 aaKnown RBP6.59□□□□□ -1.36
HDAC9-203ENST00000406072 ENO4A6NNW6 628 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 PFDN1O60925 122 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 CYLC1P35663 651 aaPredicted RBP6.58□□□□□ -1.36
HDAC9-203ENST00000406072 STX17P56962 302 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 KIF5AQ12840 1032 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 DIXDC1Q155Q3 683 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 ZFYVE27Q5T4F4 411 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 VPS53Q5VIR6 699 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 MIPOL1Q8TD10 442 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 SSH3Q8TE77 659 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 TCP11Q8WWU5 503 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 NEK1Q96PY6 1258 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 LUC7L2Q9Y383 392 aaKnown RBP6.58□□□□□ -1.36
HDAC9-203ENST00000406072 RFX7Q2KHR2 1363 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 TTC41PQ6P2S7 1318 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 TACC1O75410 805 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 KRT24Q2M2I5 525 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 CEP85Q6P2H3 762 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 ABCB6Q9NP58 842 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 PALD1Q9ULE6 856 aa6.58□□□□□ -1.36
HDAC9-203ENST00000406072 SMIM23A6NLE4 172 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms