RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 ITGB4P16144 1822 aa5□□□□□ -1.61
SMC6-203ENST00000402989 SMTNL1A8MU46 457 aa5□□□□□ -1.61
SMC6-203ENST00000402989 FMNL1O95466 1100 aaPredicted RBP5□□□□□ -1.61
SMC6-203ENST00000402989 TOP1P11387 765 aaKnown RBP5□□□□□ -1.61
SMC6-203ENST00000402989 MCM7P33993 719 aa5□□□□□ -1.61
SMC6-203ENST00000402989 ADKP55263 362 aaKnown RBP5□□□□□ -1.61
SMC6-203ENST00000402989 EVCP57679 992 aa5□□□□□ -1.61
SMC6-203ENST00000402989 MYL5Q02045 173 aa5□□□□□ -1.61
SMC6-203ENST00000402989 DHX8Q14562 1220 aaKnown RBP5□□□□□ -1.61
SMC6-203ENST00000402989 EARS2Q5JPH6 523 aaKnown RBP5□□□□□ -1.61
SMC6-203ENST00000402989 CATIPQ7Z7H3 387 aa5□□□□□ -1.61
SMC6-203ENST00000402989 DZIP1Q86YF9 867 aaKnown RBP5□□□□□ -1.61
SMC6-203ENST00000402989 GPIHBP1Q8IV16 184 aa5□□□□□ -1.61
SMC6-203ENST00000402989 SMARCE1Q969G3 411 aa5□□□□□ -1.61
SMC6-203ENST00000402989 EEF2KMTQ96G04 330 aa5□□□□□ -1.61
SMC6-203ENST00000402989 UIMC1Q96RL1 719 aa5□□□□□ -1.61
SMC6-203ENST00000402989 MCM9Q9NXL9 1143 aa5□□□□□ -1.61
SMC6-203ENST00000402989 DNAI1Q9UI46 699 aa5□□□□□ -1.61
SMC6-203ENST00000402989 ZHX1Q9UKY1 873 aaPredicted RBP5□□□□□ -1.61
SMC6-203ENST00000402989 AKAP11Q9UKA4 1901 aa5□□□□□ -1.61
SMC6-203ENST00000402989 NUP98P52948 1817 aa5□□□□□ -1.61
SMC6-203ENST00000402989 MYH7P12883 1935 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 WNT7AO00755 349 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 ZPR1O75312 459 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 CAVIN2O95810 425 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 MMP1P03956 469 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 VEGFAP15692 232 aaPredicted RBP4.99□□□□□ -1.61
SMC6-203ENST00000402989 USP5P45974 858 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 TOB1P50616 345 aaPredicted RBP4.99□□□□□ -1.61
SMC6-203ENST00000402989 NLRP5P59047 1200 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 KARSQ15046 597 aaKnown RBP4.99□□□□□ -1.61
SMC6-203ENST00000402989 PTPAQ15257 358 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 ELF2Q15723 593 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 PARP10Q53GL7 1025 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 KRBA2Q6ZNG9 492 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 PIK3AP1Q6ZUJ8 805 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 RASGRP2Q7LDG7 609 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 TXNRD3Q86VQ6 643 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 IQCA1Q86XH1 822 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 FOXP4Q8IVH2 680 aaPredicted RBP4.99□□□□□ -1.61
SMC6-203ENST00000402989 CRACR2BQ8N4Y2 399 aaPredicted RBP4.99□□□□□ -1.61
SMC6-203ENST00000402989 ENAHQ8N8S7 591 aaPredicted RBP4.99□□□□□ -1.61
SMC6-203ENST00000402989 WASF1Q92558 559 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 DYNLL2Q96FJ2 89 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 MAP7D2Q96T17 732 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 DESI2Q9BSY9 194 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 RNF41Q9H4P4 317 aaPredicted RBP4.99□□□□□ -1.61
SMC6-203ENST00000402989 ZSWIM4Q9H7M6 989 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 NFE2L3Q9Y4A8 694 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 URI1O94763 535 aaPredicted RBP4.99□□□□□ -1.61
SMC6-203ENST00000402989 DEXIO95424 95 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 USP17L8P0C7I0 530 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 GOLGA8HP0CJ92 632 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 IFNAR1P17181 557 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 NCBP1Q09161 790 aaKnown RBP4.99□□□□□ -1.61
SMC6-203ENST00000402989 POSTNQ15063 836 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 DIXDC1Q155Q3 683 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 SARM1Q6SZW1 724 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 SLC44A5Q8NCS7 719 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 LRRN4CLQ8ND94 238 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 SETDB2Q96T68 719 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 VAT1LQ9HCJ6 419 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 SAMSN1Q9NSI8 373 aaKnown RBP4.99□□□□□ -1.61
SMC6-203ENST00000402989 STX8Q9UNK0 236 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 MINPP1Q9UNW1 487 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 BAZ2AQ9UIF9 1905 aaKnown RBP4.99□□□□□ -1.61
SMC6-203ENST00000402989 TRIM75PA6NK02 468 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 CUTAO60888 179 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 CCT6AP40227 531 aaKnown RBP4.99□□□□□ -1.61
SMC6-203ENST00000402989 MECOMQ03112 1051 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 FMR1Q06787 632 aaKnown RBP eCLIP4.99□□□□□ -1.611e-6■■■■□ 21.4
SMC6-203ENST00000402989 RESP18Q5W5W9 173 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 CTCFLQ8NI51 663 aaPredicted RBP4.99□□□□□ -1.61
SMC6-203ENST00000402989 KIF18AQ8NI77 898 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 ZSCAN10Q96SZ4 725 aaPredicted RBP4.99□□□□□ -1.61
SMC6-203ENST00000402989 MAP3K14Q99558 947 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 MYH2Q9UKX2 1941 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 SLIT2O94813 1529 aa4.99□□□□□ -1.61
SMC6-203ENST00000402989 CCDC196A0A1B0GTZ2 297 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 F8W031 263 aaPredicted RBP4.98□□□□□ -1.61
SMC6-203ENST00000402989 ADAMTS3O15072 1205 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 XBP1P17861 261 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 GNAT2P19087 354 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 LIFRP42702 1097 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 GSDMDP57764 484 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 NCAPHQ15003 741 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 SGMS1Q86VZ5 419 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 STAG1Q8WVM7 1258 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 FAM84BQ96KN1 310 aaPredicted RBP4.98□□□□□ -1.61
SMC6-203ENST00000402989 PPP1R13BQ96KQ4 1090 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 NLRP3Q96P20 1036 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 CCDC94Q9BW85 323 aaPredicted RBP4.98□□□□□ -1.61
SMC6-203ENST00000402989 MAN1B1Q9UKM7 699 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 SPATA31A1Q5TZJ5 1347 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 THSD7AQ9UPZ6 1657 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 MYH3P11055 1940 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 MYH15Q9Y2K3 1946 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 BMP6P22004 513 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 CDC25BP30305 580 aa4.98□□□□□ -1.61
SMC6-203ENST00000402989 HIBADHP31937 336 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms