RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 CDAN1Q8IWY9 1227 aa16.25■□□□□ 0.19
GABPA-202ENST00000400075 SSH2Q76I76 1423 aa16.25■□□□□ 0.19
GABPA-202ENST00000400075 KLRF2D3W0D1 207 aa16.25■□□□□ 0.19
GABPA-202ENST00000400075 ASNSP08243 561 aa16.25■□□□□ 0.19
GABPA-202ENST00000400075 MCTP2Q6DN12 878 aa16.25■□□□□ 0.19
GABPA-202ENST00000400075 PALD1Q9ULE6 856 aa16.25■□□□□ 0.19
GABPA-202ENST00000400075 USO1O60763 962 aaKnown RBP16.25■□□□□ 0.19
GABPA-202ENST00000400075 SEPT7Q16181 437 aaKnown RBP16.25■□□□□ 0.19
GABPA-202ENST00000400075 SV2BQ7L1I2 683 aa16.25■□□□□ 0.19
GABPA-202ENST00000400075 APOBEC3FQ8IUX4 373 aaKnown RBP16.25■□□□□ 0.19
GABPA-202ENST00000400075 ZNF654Q8IZM8 581 aa16.25■□□□□ 0.19
GABPA-202ENST00000400075 IQGAP3Q86VI3 1631 aa16.25■□□□□ 0.19
GABPA-202ENST00000400075 BIRC3Q13489 604 aa16.25■□□□□ 0.19
GABPA-202ENST00000400075 DIS3L2Q8IYB7 885 aaKnown RBP16.25■□□□□ 0.19
GABPA-202ENST00000400075 RNF169Q8NCN4 708 aa16.25■□□□□ 0.19
GABPA-202ENST00000400075 CTNNBL1Q8WYA6 563 aaPredicted RBP16.25■□□□□ 0.19
GABPA-202ENST00000400075 CELF1Q92879 486 aaKnown RBP16.25■□□□□ 0.19
GABPA-202ENST00000400075 MAP7D2Q96T17 732 aa16.25■□□□□ 0.19
GABPA-202ENST00000400075 STK24Q9Y6E0 443 aa16.25■□□□□ 0.19
GABPA-202ENST00000400075 RPL13P26373 211 aaKnown RBP16.24■□□□□ 0.19
GABPA-202ENST00000400075 PLCD1P51178 756 aa16.24■□□□□ 0.19
GABPA-202ENST00000400075 FRMPD2Q68DX3 1309 aaPredicted RBP16.24■□□□□ 0.19
GABPA-202ENST00000400075 GAS7O60861 476 aa16.24■□□□□ 0.19
GABPA-202ENST00000400075 CD209Q9NNX6 404 aa16.24■□□□□ 0.19
GABPA-202ENST00000400075 GLI2P10070 1586 aa16.24■□□□□ 0.19
GABPA-202ENST00000400075 H7C1W4 665 aa16.24■□□□□ 0.19
GABPA-202ENST00000400075 TNNT1P13805 278 aa16.24■□□□□ 0.19
GABPA-202ENST00000400075 GPATCH4Q5T3I0 446 aaKnown RBP16.24■□□□□ 0.19
GABPA-202ENST00000400075 SP8Q8IXZ3 490 aa16.24■□□□□ 0.19
GABPA-202ENST00000400075 ZSCAN10Q96SZ4 725 aaPredicted RBP16.24■□□□□ 0.19
GABPA-202ENST00000400075 PSTPIP2Q9H939 334 aa16.24■□□□□ 0.19
GABPA-202ENST00000400075 SMCO2A6NFE2 343 aa16.24■□□□□ 0.19
GABPA-202ENST00000400075 POTEB2H3BUK9 544 aa16.24■□□□□ 0.19
GABPA-202ENST00000400075 PCP11498 1178 aaKnown RBP16.24■□□□□ 0.19
GABPA-202ENST00000400075 SPAG1Q07617 926 aa16.24■□□□□ 0.19
GABPA-202ENST00000400075 METTL13Q8N6R0 699 aa16.24■□□□□ 0.19
GABPA-202ENST00000400075 DBNLQ9UJU6 430 aaKnown RBP16.23■□□□□ 0.19
GABPA-202ENST00000400075 MINPP1Q9UNW1 487 aa16.23■□□□□ 0.19
GABPA-202ENST00000400075 MRVI1Q9Y6F6 885 aa16.23■□□□□ 0.19
GABPA-202ENST00000400075 UBE2HP62256 183 aa16.23■□□□□ 0.19
GABPA-202ENST00000400075 STX1AQ16623 288 aa16.23■□□□□ 0.19
GABPA-202ENST00000400075 TDRD3Q9H7E2 651 aaKnown RBP16.23■□□□□ 0.19
GABPA-202ENST00000400075 KCNG1Q9UIX4 513 aa16.23■□□□□ 0.19
GABPA-202ENST00000400075 ZHX1Q9UKY1 873 aaPredicted RBP16.23■□□□□ 0.19
GABPA-202ENST00000400075 hCG_1642624A0A1W2PR95 340 aa16.23■□□□□ 0.19
GABPA-202ENST00000400075 SMIM5Q71RC9 77 aa16.23■□□□□ 0.19
GABPA-202ENST00000400075 NCOA5Q9HCD5 579 aaKnown RBP16.23■□□□□ 0.19
GABPA-202ENST00000400075 LRWD1Q9UFC0 647 aa16.23■□□□□ 0.19
GABPA-202ENST00000400075 ZNRF3Q9ULT6 936 aa16.23■□□□□ 0.19
GABPA-202ENST00000400075 TNKSO95271 1327 aa16.23■□□□□ 0.19
GABPA-202ENST00000400075 MAEAQ7L5Y9 396 aa16.22■□□□□ 0.19
GABPA-202ENST00000400075 WRNIP1Q96S55 665 aa16.22■□□□□ 0.19
GABPA-202ENST00000400075 CEP83Q9Y592 693 aa16.22■□□□□ 0.19
GABPA-202ENST00000400075 CRKP46108 304 aa16.22■□□□□ 0.19
GABPA-202ENST00000400075 SLC8A3P57103 927 aa16.22■□□□□ 0.19
GABPA-202ENST00000400075 MTFR1LQ9H019 292 aa16.22■□□□□ 0.19
GABPA-202ENST00000400075 CLTCL1P53675 1640 aa16.22■□□□□ 0.19
GABPA-202ENST00000400075 E7EWF7 191 aa16.22■□□□□ 0.19
GABPA-202ENST00000400075 OTUD6AQ7L8S5 288 aa16.22■□□□□ 0.19
GABPA-202ENST00000400075 PCDHA1Q9Y5I3 950 aa16.22■□□□□ 0.19
GABPA-202ENST00000400075 HOXD10P28358 340 aa16.22■□□□□ 0.19
GABPA-202ENST00000400075 NOP2P46087 812 aaKnown RBP16.22■□□□□ 0.19
GABPA-202ENST00000400075 DYNLL1P63167 89 aaKnown RBP16.22■□□□□ 0.19
GABPA-202ENST00000400075 AMNQ9BXJ7 453 aa16.22■□□□□ 0.19
GABPA-202ENST00000400075 EXOC7Q9UPT5 735 aa16.22■□□□□ 0.19
GABPA-202ENST00000400075 TTLL1O95922 423 aa16.21■□□□□ 0.19
GABPA-202ENST00000400075 IQCEQ6IPM2 695 aa16.21■□□□□ 0.19
GABPA-202ENST00000400075 UIMC1Q96RL1 719 aa16.21■□□□□ 0.19
GABPA-202ENST00000400075 ZNF341Q9BYN7 854 aa16.21■□□□□ 0.19
GABPA-202ENST00000400075 WDR70Q9NW82 654 aa16.21■□□□□ 0.19
GABPA-202ENST00000400075 DNM3Q9UQ16 869 aa16.21■□□□□ 0.19
GABPA-202ENST00000400075 GOLGA8HP0CJ92 632 aa16.21■□□□□ 0.19
GABPA-202ENST00000400075 MSANTD4Q8NCY6 345 aa16.21■□□□□ 0.19
GABPA-202ENST00000400075 FGAP02671 866 aa16.21■□□□□ 0.19
GABPA-202ENST00000400075 ACTN2P35609 894 aa16.21■□□□□ 0.19
GABPA-202ENST00000400075 ZNF165P49910 485 aa16.21■□□□□ 0.19
GABPA-202ENST00000400075 MIER3Q7Z3K6 550 aa16.21■□□□□ 0.19
GABPA-202ENST00000400075 SNX29Q8TEQ0 813 aa16.21■□□□□ 0.19
GABPA-202ENST00000400075 PHKBQ93100 1093 aa16.21■□□□□ 0.19
GABPA-202ENST00000400075 AKR1B10O60218 316 aa16.21■□□□□ 0.18
GABPA-202ENST00000400075 TMOD1P28289 359 aa16.21■□□□□ 0.18
GABPA-202ENST00000400075 CEP170BQ9Y4F5 1589 aaPredicted RBP16.21■□□□□ 0.18
GABPA-202ENST00000400075 ZEB2O60315 1214 aa16.2■□□□□ 0.18
GABPA-202ENST00000400075 NR1I2O75469 434 aa16.2■□□□□ 0.18
GABPA-202ENST00000400075 CACNB3P54284 484 aa16.2■□□□□ 0.18
GABPA-202ENST00000400075 SEC62Q99442 399 aaKnown RBP16.2■□□□□ 0.18
GABPA-202ENST00000400075 HACL1Q9UJ83 578 aa16.2■□□□□ 0.18
GABPA-202ENST00000400075 NCOA3Q9Y6Q9 1424 aa16.2■□□□□ 0.18
GABPA-202ENST00000400075 HSPD1P10809 573 aaKnown RBP16.2■□□□□ 0.18
GABPA-202ENST00000400075 BMP3P12645 472 aa16.2■□□□□ 0.18
GABPA-202ENST00000400075 COA7Q96BR5 231 aa16.2■□□□□ 0.18
GABPA-202ENST00000400075 USP26Q9BXU7 913 aa16.2■□□□□ 0.18
GABPA-202ENST00000400075 ADAMTS13Q76LX8 1427 aa16.2■□□□□ 0.18
GABPA-202ENST00000400075 DNA2P51530 1060 aa16.2■□□□□ 0.18
GABPA-202ENST00000400075 TTC38Q5R3I4 469 aa16.2■□□□□ 0.18
GABPA-202ENST00000400075 UTP14CQ5TAP6 766 aaKnown RBP16.2■□□□□ 0.18
GABPA-202ENST00000400075 FRMD4BQ9Y2L6 1034 aa16.2■□□□□ 0.18
GABPA-202ENST00000400075 ZHX2Q9Y6X8 837 aa16.2■□□□□ 0.18
GABPA-202ENST00000400075 PTPN12Q05209 780 aaKnown RBP16.2■□□□□ 0.18
GABPA-202ENST00000400075 CALCRLQ16602 461 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms