RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 TRIM42Q8IWZ5 723 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 ATP6V0A1Q93050 837 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 HAUS1Q96CS2 278 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 TSPY2A6NKD2 308 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 HLA-DOAP06340 250 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 PEX19P40855 299 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 SPZ1Q9BXG8 430 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 CUTAO60888 179 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 KIFAP3Q92845 792 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 DBF4Q9UBU7 674 aaPredicted RBP9.25□□□□□ -0.93
CHD8-201ENST00000399982 ANGPTL2Q9UKU9 493 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 LMNB2Q03252 620 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 ZNF215Q9UL58 517 aaPredicted RBP9.25□□□□□ -0.93
CHD8-201ENST00000399982 ASXL1Q8IXJ9 1541 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 HMGB3O15347 200 aaKnown RBP9.25□□□□□ -0.93
CHD8-201ENST00000399982 STX10O60499 249 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 SERPINI2O75830 405 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 NUDCD3Q8IVD9 361 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 ST13P4Q8IZP2 240 aaPredicted RBP9.25□□□□□ -0.93
CHD8-201ENST00000399982 TSC1Q92574 1164 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 OLFM3Q96PB7 478 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 TRIM56Q9BRZ2 755 aaKnown RBP9.25□□□□□ -0.93
CHD8-201ENST00000399982 STX2P32856 288 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 SP4Q02446 784 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 TRIM68Q6AZZ1 485 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 NRBF2Q96F24 287 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 LARP6Q9BRS8 491 aaKnown RBP9.25□□□□□ -0.93
CHD8-201ENST00000399982 BOLA2Q9H3K6 86 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 FGFR1OP2Q9NVK5 253 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 CFTRP13569 1480 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 MYO1CO00159 1063 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 STARD3NLO95772 234 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 UQCRFS1P1P0C7P4 283 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 SLC5A1P13866 664 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 UBE3BQ7Z3V4 1068 aa9.25□□□□□ -0.93
CHD8-201ENST00000399982 PARD3Q8TEW0 1356 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 NOP14P78316 857 aaKnown RBP9.24□□□□□ -0.93
CHD8-201ENST00000399982 ST5P78524 1137 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 CNNM4Q6P4Q7 775 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 ZRANB1Q9UGI0 708 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 HYOU1Q9Y4L1 999 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 PIK3C2GO75747 1445 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 EPHB4P54760 987 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 MCMDC2Q4G0Z9 681 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 PARD3BQ8TEW8 1205 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 POMGNT1Q8WZA1 660 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 STK38LQ9Y2H1 464 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 OCM2P0CE71 109 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 OCMP0CE72 109 aaPredicted RBP9.24□□□□□ -0.93
CHD8-201ENST00000399982 HARSP12081 509 aaKnown RBP9.24□□□□□ -0.93
CHD8-201ENST00000399982 GNAT2P19087 354 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 SDCCAG3Q96C92 435 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 NOD1Q9Y239 953 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 WBP4O75554 376 aaKnown RBP9.24□□□□□ -0.93
CHD8-201ENST00000399982 HS2ST1Q7LGA3 356 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 GRK7Q8WTQ7 553 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 NPR1P16066 1061 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 CTNNA1P35221 906 aaKnown RBP9.24□□□□□ -0.93
CHD8-201ENST00000399982 USP6NLQ92738 828 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 NR1H4Q96RI1 486 aaPredicted RBP9.24□□□□□ -0.93
CHD8-201ENST00000399982 ITGB1BP2Q9UKP3 347 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 RBM8AQ9Y5S9 174 aaKnown RBP9.24□□□□□ -0.93
CHD8-201ENST00000399982 KIF24Q5T7B8 1368 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 SCAF11Q99590 1463 aaKnown RBP9.24□□□□□ -0.93
CHD8-201ENST00000399982 ZFXP17010 805 aaPredicted RBP9.24□□□□□ -0.93
CHD8-201ENST00000399982 LMNB1P20700 586 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 ASIC1P78348 528 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 KLHDC4Q8TBB5 520 aa9.24□□□□□ -0.93
CHD8-201ENST00000399982 DDX21Q9NR30 783 aaKnown RBP eCLIP9.24□□□□□ -0.93
CHD8-201ENST00000399982 BAG2O95816 211 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 PHBP35232 272 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 SLC12A2P55011 1212 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 RTN1Q16799 776 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 ZNF530Q6P9A1 599 aaPredicted RBP9.23□□□□□ -0.93
CHD8-201ENST00000399982 TTC30BQ8N4P2 665 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 RUBCNQ92622 972 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 CDC23Q9UJX2 597 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 PAIP2BQ9ULR5 123 aaKnown RBP9.23□□□□□ -0.93
CHD8-201ENST00000399982 EIF3BP55884 814 aaKnown RBP9.23□□□□□ -0.93
CHD8-201ENST00000399982 SLC26A6Q9BXS9 759 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 GEMIN8Q9NWZ8 242 aaKnown RBP9.23□□□□□ -0.93
CHD8-201ENST00000399982 DDX41Q9UJV9 622 aaKnown RBP9.23□□□□□ -0.93
CHD8-201ENST00000399982 KLF18A0A0U1RQI7 1052 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 KCNA4P22459 653 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 WTAPQ15007 396 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 DHX32Q7L7V1 743 aaKnown RBP9.23□□□□□ -0.93
CHD8-201ENST00000399982 NLRP7Q8WX94 980 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 ESR2Q92731 530 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 PRXQ9BXM0 1461 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 KDM2BQ8NHM5 1336 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 SYNRGQ9UMZ2 1314 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 PRDM2Q13029 1718 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 RPS6KA1Q15418 735 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 LRRC8AQ8IWT6 810 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 ANO3Q9BYT9 981 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 TEKT2Q9UIF3 430 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 EIF2AK4Q9P2K8 1649 aaKnown RBP9.23□□□□□ -0.93
CHD8-201ENST00000399982 JADE1Q6IE81 842 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 HEATR3Q7Z4Q2 680 aa9.23□□□□□ -0.93
CHD8-201ENST00000399982 PIP4K2CQ8TBX8 421 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms