RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 MYH3P11055 1940 aa13.5□□□□□ -0.25
ITSN1-211ENST00000399355 CCT6AP40227 531 aaKnown RBP13.5□□□□□ -0.25
ITSN1-211ENST00000399355 HOMER1Q86YM7 354 aa13.5□□□□□ -0.25
ITSN1-211ENST00000399355 CCAR2Q8N163 923 aaKnown RBP13.5□□□□□ -0.25
ITSN1-211ENST00000399355 CCDC112Q8NEF3 446 aa13.5□□□□□ -0.25
ITSN1-211ENST00000399355 DNAI1Q9UI46 699 aa13.5□□□□□ -0.25
ITSN1-211ENST00000399355 RFX7Q2KHR2 1363 aa13.5□□□□□ -0.25
ITSN1-211ENST00000399355 CMA1P23946 247 aa13.49□□□□□ -0.25
ITSN1-211ENST00000399355 TYW1BQ6NUM6 668 aa13.49□□□□□ -0.25
ITSN1-211ENST00000399355 CRACR2BQ8N4Y2 399 aaPredicted RBP13.49□□□□□ -0.25
ITSN1-211ENST00000399355 MXD3Q9BW11 206 aa13.49□□□□□ -0.25
ITSN1-211ENST00000399355 VAT1LQ9HCJ6 419 aa13.49□□□□□ -0.25
ITSN1-211ENST00000399355 NFE2L3Q9Y4A8 694 aa13.49□□□□□ -0.25
ITSN1-211ENST00000399355 MMP1P03956 469 aa13.49□□□□□ -0.25
ITSN1-211ENST00000399355 PKN1Q16512 942 aa13.49□□□□□ -0.25
ITSN1-211ENST00000399355 PIK3AP1Q6ZUJ8 805 aa13.49□□□□□ -0.25
ITSN1-211ENST00000399355 HPS3Q969F9 1004 aa13.49□□□□□ -0.25
ITSN1-211ENST00000399355 TEX13AQ9BXU3 409 aaPredicted RBP13.49□□□□□ -0.25
ITSN1-211ENST00000399355 C4AP0C0L4 1744 aa13.49□□□□□ -0.25
ITSN1-211ENST00000399355 C4BP0C0L5 1744 aa13.49□□□□□ -0.25
ITSN1-211ENST00000399355 TTF1Q15361 905 aaPredicted RBP13.48□□□□□ -0.25
ITSN1-211ENST00000399355 TOGARAM2Q6ZUX3 1019 aa13.48□□□□□ -0.25
ITSN1-211ENST00000399355 SRBD1Q8N5C6 995 aaKnown RBP13.48□□□□□ -0.25
ITSN1-211ENST00000399355 PPP1R13BQ96KQ4 1090 aa13.48□□□□□ -0.25
ITSN1-211ENST00000399355 RIOK1Q9BRS2 568 aaKnown RBP13.48□□□□□ -0.25
ITSN1-211ENST00000399355 MAN1B1Q9UKM7 699 aa13.48□□□□□ -0.25
ITSN1-211ENST00000399355 YEATS4O95619 227 aa13.48□□□□□ -0.25
ITSN1-211ENST00000399355 NLRP12P59046 1061 aa13.48□□□□□ -0.25
ITSN1-211ENST00000399355 CTR9Q6PD62 1173 aa13.48□□□□□ -0.25
ITSN1-211ENST00000399355 ANKRD18AQ8IVF6 992 aa13.48□□□□□ -0.25
ITSN1-211ENST00000399355 DOT1LQ8TEK3 1739 aa13.48□□□□□ -0.25
ITSN1-211ENST00000399355 ECM29Q5VYK3 1845 aa13.48□□□□□ -0.25
ITSN1-211ENST00000399355 KRBA2Q6ZNG9 492 aa13.48□□□□□ -0.25
ITSN1-211ENST00000399355 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.48□□□□□ -0.25
ITSN1-211ENST00000399355 FBXO2Q9UK22 296 aaPredicted RBP13.48□□□□□ -0.25
ITSN1-211ENST00000399355 ABCA3Q99758 1704 aa13.48□□□□□ -0.25
ITSN1-211ENST00000399355 MROH5Q6ZUA9 1318 aa13.48□□□□□ -0.25
ITSN1-211ENST00000399355 RNF225M0QZC1 329 aaPredicted RBP13.48□□□□□ -0.25
ITSN1-211ENST00000399355 SFPQP23246 707 aaKnown RBP eCLIP13.48□□□□□ -0.25
ITSN1-211ENST00000399355 SPATA31A1Q5TZJ5 1347 aa13.47□□□□□ -0.25
ITSN1-211ENST00000399355 IFIT1BQ5T764 474 aaKnown RBP13.47□□□□□ -0.25
ITSN1-211ENST00000399355 NGLY1Q96IV0 654 aa13.47□□□□□ -0.25
ITSN1-211ENST00000399355 MCM9Q9NXL9 1143 aa13.47□□□□□ -0.25
ITSN1-211ENST00000399355 FAM205AQ6ZU69 1335 aa13.47□□□□□ -0.25
ITSN1-211ENST00000399355 SHROOM1Q2M3G4 852 aaPredicted RBP13.47□□□□□ -0.25
ITSN1-211ENST00000399355 KMT5BQ4FZB7 885 aa13.47□□□□□ -0.25
ITSN1-211ENST00000399355 SYMPKQ92797 1274 aaKnown RBP13.47□□□□□ -0.25
ITSN1-211ENST00000399355 MRFAP1L1Q96HT8 127 aa13.47□□□□□ -0.25
ITSN1-211ENST00000399355 PRIMPOLQ96LW4 560 aa13.47□□□□□ -0.25
ITSN1-211ENST00000399355 STX8Q9UNK0 236 aa13.47□□□□□ -0.25
ITSN1-211ENST00000399355 HPSEQ9Y251 543 aa13.47□□□□□ -0.25
ITSN1-211ENST00000399355 ABCC6O95255 1503 aa13.47□□□□□ -0.25
ITSN1-211ENST00000399355 LRP6O75581 1613 aa13.47□□□□□ -0.25
ITSN1-211ENST00000399355 FMNL1O95466 1100 aaPredicted RBP13.47□□□□□ -0.25
ITSN1-211ENST00000399355 CDK11BP21127 795 aaKnown RBP13.47□□□□□ -0.25
ITSN1-211ENST00000399355 RESP18Q5W5W9 173 aa13.47□□□□□ -0.25
ITSN1-211ENST00000399355 BRAPQ7Z569 592 aa13.47□□□□□ -0.25
ITSN1-211ENST00000399355 NBPF5PQ86XG9 351 aaPredicted RBP13.47□□□□□ -0.25
ITSN1-211ENST00000399355 WDR24Q96S15 920 aa13.47□□□□□ -0.25
ITSN1-211ENST00000399355 ERICH2A1L162 156 aa13.46□□□□□ -0.25
ITSN1-211ENST00000399355 UQCRFS1P1P0C7P4 283 aa13.46□□□□□ -0.25
ITSN1-211ENST00000399355 TAL1P17542 331 aaPredicted RBP13.46□□□□□ -0.25
ITSN1-211ENST00000399355 PLCD1P51178 756 aa13.46□□□□□ -0.25
ITSN1-211ENST00000399355 IL17AQ16552 155 aa13.46□□□□□ -0.25
ITSN1-211ENST00000399355 FBXO38Q6PIJ6 1188 aa13.46□□□□□ -0.25
ITSN1-211ENST00000399355 MAPKAPK5Q8IW41 473 aa13.46□□□□□ -0.25
ITSN1-211ENST00000399355 LZTFL1Q9NQ48 299 aa13.46□□□□□ -0.25
ITSN1-211ENST00000399355 RNF216Q9NWF9 866 aaPredicted RBP13.46□□□□□ -0.25
ITSN1-211ENST00000399355 A0A1W2PQ27 194 aa13.46□□□□□ -0.25
ITSN1-211ENST00000399355 A0A1W2PQ64 194 aa13.46□□□□□ -0.25
ITSN1-211ENST00000399355 A0A1W2PQD8 194 aa13.46□□□□□ -0.25
ITSN1-211ENST00000399355 SLC35G1Q2M3R5 365 aa13.46□□□□□ -0.25
ITSN1-211ENST00000399355 KRI1Q8N9T8 703 aaKnown RBP13.46□□□□□ -0.25
ITSN1-211ENST00000399355 ANKIB1Q9P2G1 1089 aa13.46□□□□□ -0.25
ITSN1-211ENST00000399355 PAPPAQ13219 1627 aa13.46□□□□□ -0.25
ITSN1-211ENST00000399355 CICQ96RK0 1608 aaPredicted RBP13.46□□□□□ -0.25
ITSN1-211ENST00000399355 TRIM49BA6NDI0 452 aa13.46□□□□□ -0.26
ITSN1-211ENST00000399355 SOWAHDA6NJG2 315 aa13.46□□□□□ -0.26
ITSN1-211ENST00000399355 RAD21O60216 631 aa13.46□□□□□ -0.26
ITSN1-211ENST00000399355 SEC31AO94979 1220 aaKnown RBP13.46□□□□□ -0.26
ITSN1-211ENST00000399355 LRRFIP1Q32MZ4 808 aaKnown RBP13.46□□□□□ -0.26
ITSN1-211ENST00000399355 PTGDRQ13258 359 aa13.45□□□□□ -0.26
ITSN1-211ENST00000399355 POSTNQ15063 836 aa13.45□□□□□ -0.26
ITSN1-211ENST00000399355 SEC23AQ15436 765 aa13.45□□□□□ -0.26
ITSN1-211ENST00000399355 CPLX2Q6PUV4 134 aaKnown RBP13.45□□□□□ -0.26
ITSN1-211ENST00000399355 MTRQ99707 1265 aa13.45□□□□□ -0.26
ITSN1-211ENST00000399355 PES1O00541 588 aaKnown RBP13.45□□□□□ -0.26
ITSN1-211ENST00000399355 IFNAR1P17181 557 aa13.45□□□□□ -0.26
ITSN1-211ENST00000399355 SGMS1Q86VZ5 419 aa13.45□□□□□ -0.26
ITSN1-211ENST00000399355 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
ITSN1-211ENST00000399355 NPY5RQ15761 445 aa13.45□□□□□ -0.26
ITSN1-211ENST00000399355 NYAP1Q6ZVC0 841 aa13.45□□□□□ -0.26
ITSN1-211ENST00000399355 TRIM22Q8IYM9 498 aa13.45□□□□□ -0.26
ITSN1-211ENST00000399355 SH3RF3Q8TEJ3 882 aaPredicted RBP13.45□□□□□ -0.26
ITSN1-211ENST00000399355 ZSCAN10Q96SZ4 725 aaPredicted RBP13.45□□□□□ -0.26
ITSN1-211ENST00000399355 NACAP1Q9BZK3 213 aa13.45□□□□□ -0.26
ITSN1-211ENST00000399355 RBAK-RBAKDNI3L0D1 243 aa13.44□□□□□ -0.26
ITSN1-211ENST00000399355 CTAGE5O15320 804 aa13.44□□□□□ -0.26
ITSN1-211ENST00000399355 LRRC15Q8TF66 581 aa13.44□□□□□ -0.26
ITSN1-211ENST00000399355 TGFBRAP1Q8WUH2 860 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms