RNA–Protein interactions for RNA: ENST00000398809.8

CDH23-205, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-205ENST00000398809 GREM2Q9H772 168 aa19.26■□□□□ 0.67
CDH23-205ENST00000398809 RPS8P62241 208 aaKnown RBP19.26■□□□□ 0.67
CDH23-205ENST00000398809 HERC4Q5GLZ8 1057 aaPredicted RBP19.26■□□□□ 0.67
CDH23-205ENST00000398809 NBPF11Q86T75 865 aa19.26■□□□□ 0.67
CDH23-205ENST00000398809 JAKMIP2Q96AA8 810 aa19.26■□□□□ 0.67
CDH23-205ENST00000398809 SLAIN2Q9P270 581 aa19.26■□□□□ 0.67
CDH23-205ENST00000398809 PPP1R2P41236 205 aa19.26■□□□□ 0.67
CDH23-205ENST00000398809 ERCC6LQ2NKX8 1250 aa19.26■□□□□ 0.67
CDH23-205ENST00000398809 PAIP2Q9BPZ3 127 aaKnown RBP19.26■□□□□ 0.67
CDH23-205ENST00000398809 TNKSO95271 1327 aa19.26■□□□□ 0.67
CDH23-205ENST00000398809 PCCAP05165 728 aaPredicted RBP19.26■□□□□ 0.67
CDH23-205ENST00000398809 TGFBRAP1Q8WUH2 860 aa19.26■□□□□ 0.67
CDH23-205ENST00000398809 A0A1W2PRG0 241 aa19.25■□□□□ 0.67
CDH23-205ENST00000398809 TNNC1P63316 161 aa19.25■□□□□ 0.67
CDH23-205ENST00000398809 SYNCQ9H7C4 482 aa19.25■□□□□ 0.67
CDH23-205ENST00000398809 INCENPQ9NQS7 918 aa19.25■□□□□ 0.67
CDH23-205ENST00000398809 RASAL2Q9UJF2 1139 aa19.25■□□□□ 0.67
CDH23-205ENST00000398809 PRDM15P57071 1507 aaPredicted RBP19.25■□□□□ 0.67
CDH23-205ENST00000398809 CHMP2AO43633 222 aa19.25■□□□□ 0.67
CDH23-205ENST00000398809 EEF2P13639 858 aaKnown RBP19.25■□□□□ 0.67
CDH23-205ENST00000398809 MAGEA1P43355 309 aa19.25■□□□□ 0.67
CDH23-205ENST00000398809 PLCB3Q01970 1234 aa19.25■□□□□ 0.67
CDH23-205ENST00000398809 ZMYM1Q5SVZ6 1142 aa19.25■□□□□ 0.67
CDH23-205ENST00000398809 TBC1D7Q9P0N9 293 aa19.25■□□□□ 0.67
CDH23-205ENST00000398809 CCDC25Q86WR0 208 aa19.24■□□□□ 0.67
CDH23-205ENST00000398809 LRRC8AQ8IWT6 810 aa19.24■□□□□ 0.67
CDH23-205ENST00000398809 MRFAP1L1Q96HT8 127 aa19.24■□□□□ 0.67
CDH23-205ENST00000398809 CETN3O15182 167 aa19.24■□□□□ 0.67
CDH23-205ENST00000398809 NSUN7Q8NE18 718 aaKnown RBP19.24■□□□□ 0.67
CDH23-205ENST00000398809 GGA1Q9UJY5 639 aa19.24■□□□□ 0.67
CDH23-205ENST00000398809 SASH1O94885 1247 aa19.24■□□□□ 0.67
CDH23-205ENST00000398809 MYCNP04198 464 aaPredicted RBP19.24■□□□□ 0.67
CDH23-205ENST00000398809 PI16Q6UXB8 463 aa19.24■□□□□ 0.67
CDH23-205ENST00000398809 SMAP1Q8IYB5 467 aaPredicted RBP19.24■□□□□ 0.67
CDH23-205ENST00000398809 PCDHA5Q9Y5H7 936 aa19.24■□□□□ 0.67
CDH23-205ENST00000398809 UTP14CQ5TAP6 766 aaKnown RBP19.24■□□□□ 0.67
CDH23-205ENST00000398809 KRT25Q7Z3Z0 450 aa19.24■□□□□ 0.67
CDH23-205ENST00000398809 MICALL1Q8N3F8 863 aa19.24■□□□□ 0.67
CDH23-205ENST00000398809 FAM76AQ8TAV0 307 aa19.24■□□□□ 0.67
CDH23-205ENST00000398809 USP6P35125 1406 aa19.24■□□□□ 0.67
CDH23-205ENST00000398809 GIGYF2Q6Y7W6 1299 aaKnown RBP19.23■□□□□ 0.67
CDH23-205ENST00000398809 ATP7BP35670 1465 aa19.23■□□□□ 0.67
CDH23-205ENST00000398809 PDE8BO95263 885 aa19.23■□□□□ 0.67
CDH23-205ENST00000398809 FAM207AQ9NSI2 230 aaPredicted RBP19.23■□□□□ 0.67
CDH23-205ENST00000398809 IKBKGQ9Y6K9 419 aa19.23■□□□□ 0.67
CDH23-205ENST00000398809 ETF1P62495 437 aaKnown RBP19.23■□□□□ 0.67
CDH23-205ENST00000398809 KRBA2Q6ZNG9 492 aa19.23■□□□□ 0.67
CDH23-205ENST00000398809 CABP7Q86V35 215 aa19.23■□□□□ 0.67
CDH23-205ENST00000398809 TICAM2Q86XR7 235 aa19.23■□□□□ 0.67
CDH23-205ENST00000398809 NELFCDQ8IXH7 590 aa19.23■□□□□ 0.67
CDH23-205ENST00000398809 C10orf67Q8IYJ2 551 aa19.23■□□□□ 0.67
CDH23-205ENST00000398809 EEF2KMTQ96G04 330 aa19.23■□□□□ 0.67
CDH23-205ENST00000398809 SELENOSQ9BQE4 189 aa19.23■□□□□ 0.67
CDH23-205ENST00000398809 TSGA10Q9BZW7 698 aa19.23■□□□□ 0.67
CDH23-205ENST00000398809 HOMER2Q9NSB8 354 aa19.23■□□□□ 0.67
CDH23-205ENST00000398809 ASAP1Q9ULH1 1129 aa19.23■□□□□ 0.67
CDH23-205ENST00000398809 MAST3O60307 1309 aa19.23■□□□□ 0.67
CDH23-205ENST00000398809 ZMYM6O95789 1325 aa19.23■□□□□ 0.67
CDH23-205ENST00000398809 PI4K2BQ8TCG2 481 aa19.23■□□□□ 0.67
CDH23-205ENST00000398809 EYA3Q99504 573 aa19.23■□□□□ 0.67
CDH23-205ENST00000398809 CDCA7Q9BWT1 371 aaPredicted RBP19.23■□□□□ 0.67
CDH23-205ENST00000398809 ATP6V0A2Q9Y487 856 aa19.23■□□□□ 0.67
CDH23-205ENST00000398809 FAM98CQ17RN3 349 aaKnown RBP19.22■□□□□ 0.67
CDH23-205ENST00000398809 C8orf74Q6P047 294 aa19.22■□□□□ 0.67
CDH23-205ENST00000398809 ERBB4Q15303 1308 aa19.22■□□□□ 0.67
CDH23-205ENST00000398809 ARFGAP2Q8N6H7 521 aa19.22■□□□□ 0.67
CDH23-205ENST00000398809 IMPG2Q9BZV3 1241 aa19.22■□□□□ 0.67
CDH23-205ENST00000398809 SLC1A4P43007 532 aa19.22■□□□□ 0.67
CDH23-205ENST00000398809 FAM212AQ96EL1 285 aa19.22■□□□□ 0.67
CDH23-205ENST00000398809 GDAP1L1Q96MZ0 367 aa19.22■□□□□ 0.67
CDH23-205ENST00000398809 MYO5CQ9NQX4 1742 aa19.22■□□□□ 0.67
CDH23-205ENST00000398809 REXO1Q8N1G1 1221 aaKnown RBP19.21■□□□□ 0.67
CDH23-205ENST00000398809 OTUD6BQ8N6M0 293 aa19.21■□□□□ 0.67
CDH23-205ENST00000398809 SECISBP2LQ93073 1101 aaKnown RBP19.21■□□□□ 0.67
CDH23-205ENST00000398809 PPARDQ03181 441 aa19.21■□□□□ 0.67
CDH23-205ENST00000398809 PTPN12Q05209 780 aaKnown RBP19.21■□□□□ 0.67
CDH23-205ENST00000398809 NLRC4Q9NPP4 1024 aa19.21■□□□□ 0.67
CDH23-205ENST00000398809 GSTA5Q7RTV2 222 aa19.21■□□□□ 0.67
CDH23-205ENST00000398809 CCDC50Q8IVM0 306 aa19.21■□□□□ 0.67
CDH23-205ENST00000398809 RBM17Q96I25 401 aaKnown RBP19.21■□□□□ 0.67
CDH23-205ENST00000398809 CCDC77Q9BR77 488 aa19.21■□□□□ 0.67
CDH23-205ENST00000398809 RABEP2Q9H5N1 569 aa19.21■□□□□ 0.67
CDH23-205ENST00000398809 RTEL1Q9NZ71 1219 aa19.21■□□□□ 0.67
CDH23-205ENST00000398809 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.21■□□□□ 0.67
CDH23-205ENST00000398809 EPB41P11171 864 aaKnown RBP19.21■□□□□ 0.67
CDH23-205ENST00000398809 ADCY7P51828 1080 aa19.21■□□□□ 0.67
CDH23-205ENST00000398809 RBM6P78332 1123 aaKnown RBP19.21■□□□□ 0.67
CDH23-205ENST00000398809 DPCR1Q3MIW9 517 aa19.21■□□□□ 0.67
CDH23-205ENST00000398809 CPLX4Q7Z7G2 160 aa19.21■□□□□ 0.67
CDH23-205ENST00000398809 ZSCAN10Q96SZ4 725 aaPredicted RBP19.21■□□□□ 0.67
CDH23-205ENST00000398809 NUP58Q9BVL2 599 aa19.21■□□□□ 0.67
CDH23-205ENST00000398809 DNAI2Q9GZS0 605 aa19.21■□□□□ 0.67
CDH23-205ENST00000398809 PODXL2Q9NZ53 605 aa19.21■□□□□ 0.67
CDH23-205ENST00000398809 PARP3Q9Y6F1 533 aa19.21■□□□□ 0.67
CDH23-205ENST00000398809 ZYXQ15942 572 aaKnown RBP19.2■□□□□ 0.66
CDH23-205ENST00000398809 APOA5Q6Q788 366 aa19.2■□□□□ 0.66
CDH23-205ENST00000398809 CALCRLQ16602 461 aa19.2■□□□□ 0.66
CDH23-205ENST00000398809 SLC9C1Q4G0N8 1177 aa19.2■□□□□ 0.66
CDH23-205ENST00000398809 FRMD4BQ9Y2L6 1034 aa19.2■□□□□ 0.66
CDH23-205ENST00000398809 BACH1O14867 736 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms