RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 FOSL2P15408 326 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 LRRC8CQ8TDW0 803 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 NBPF26B4DH59 902 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 NBPF14Q5TI25 921 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 PPP4R4Q6NUP7 873 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 NBPF15Q8N660 670 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 CNGB3Q9NQW8 809 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 NFKBIL1Q9UBC1 381 aaPredicted RBP8.83□□□□□ -1
TRPS1-203ENST00000395715 VPS8Q8N3P4 1428 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 DKC1O60832 514 aaKnown RBP eCLIP8.83□□□□□ -1
TRPS1-203ENST00000395715 PDE4BQ07343 736 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 IFT88Q13099 833 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 KLHL7Q8IXQ5 586 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 SYCE1Q8N0S2 351 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 SCYL1Q96KG9 808 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 PRR23D1E9PI22 279 aaPredicted RBP8.82□□□□□ -1
TRPS1-203ENST00000395715 H3BRJ5 948 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 PRR23D2P0DMB1 279 aaPredicted RBP8.82□□□□□ -1
TRPS1-203ENST00000395715 FSCBQ5H9T9 825 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 TRIM59Q8IWR1 403 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 NEUROG2Q9H2A3 272 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 SYTL2Q9HCH5 934 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 HSPA8P11142 646 aaKnown RBP8.82□□□□□ -1
TRPS1-203ENST00000395715 SECISBP2LQ93073 1101 aaKnown RBP8.82□□□□□ -1
TRPS1-203ENST00000395715 WDR44Q5JSH3 913 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 SND1Q7KZF4 910 aaKnown RBP eCLIP8.82□□□□□ -1
TRPS1-203ENST00000395715 PHKBQ93100 1093 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 DHX58Q96C10 678 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 NAP1L4Q99733 375 aaKnown RBP8.82□□□□□ -1
TRPS1-203ENST00000395715 STRIP2Q9ULQ0 834 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 LZTS1Q9Y250 596 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 ATP11BQ9Y2G3 1177 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 PDE6AP16499 860 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 MARCKSP29966 332 aaPredicted RBP8.82□□□□□ -1
TRPS1-203ENST00000395715 CCT5P48643 541 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 RWDD2BP57060 319 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 DMTNQ08495 405 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 HDAC11Q96DB2 347 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 MRPS26Q9BYN8 205 aaKnown RBP8.82□□□□□ -1
TRPS1-203ENST00000395715 PACSIN2Q9UNF0 486 aaPredicted RBP8.82□□□□□ -1
TRPS1-203ENST00000395715 C11orf95C9JLR9 678 aaPredicted RBP8.82□□□□□ -1
TRPS1-203ENST00000395715 GSTA4O15217 222 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 HMGB2P26583 209 aaKnown RBP8.82□□□□□ -1
TRPS1-203ENST00000395715 PRKAR2BP31323 418 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 ASPHQ12797 758 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 TMED10P49755 219 aaKnown RBP8.82□□□□□ -1
TRPS1-203ENST00000395715 ANGPT1Q15389 498 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 SLF2Q8IX21 1173 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 TSKSQ9UJT2 592 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 DNAJC6O75061 913 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 MFSD6Q6ZSS7 791 aa8.82□□□□□ -1
TRPS1-203ENST00000395715 WARS2Q9UGM6 360 aaKnown RBP8.82□□□□□ -1
TRPS1-203ENST00000395715 TSPY2A6NKD2 308 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 TNFAIP3P21580 790 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 ZC3H18Q86VM9 953 aaKnown RBP8.81□□□□□ -1
TRPS1-203ENST00000395715 ARMC2Q8NEN0 867 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 COQ7Q99807 217 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 SUCLA2Q9P2R7 463 aaPredicted RBP8.81□□□□□ -1
TRPS1-203ENST00000395715 EPB41P11171 864 aaKnown RBP8.81□□□□□ -1
TRPS1-203ENST00000395715 STX17P56962 302 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 HIF1AQ16665 826 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 CEP78Q5JTW2 689 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 YIPF3Q9GZM5 350 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 C6orf203Q9P0P8 240 aaPredicted RBP8.81□□□□□ -1
TRPS1-203ENST00000395715 RNASELQ05823 741 aaKnown RBP8.81□□□□□ -1
TRPS1-203ENST00000395715 KLHL29Q96CT2 875 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 ELP1O95163 1332 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 TMEM191CA6NGB0 347 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 TMEM191BP0C7N4 346 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 KRT2P35908 639 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 HDAC4P56524 1084 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 TBC1D10BQ4KMP7 808 aaPredicted RBP8.81□□□□□ -1
TRPS1-203ENST00000395715 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.81□□□□□ -1
TRPS1-203ENST00000395715 CCDC197Q8NCU1 140 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 ARIH1Q9Y4X5 557 aaPredicted RBP8.81□□□□□ -1
TRPS1-203ENST00000395715 RAB14P61106 215 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 KMT5BQ4FZB7 885 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 SLC38A10Q9HBR0 1119 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 RPL13P26373 211 aaKnown RBP8.81□□□□□ -1
TRPS1-203ENST00000395715 GUCY2FP51841 1108 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 KIF22Q14807 665 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 FAM180AQ6UWF9 173 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 ARMCX6Q7L4S7 300 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 DYDC2Q96IM9 177 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 ASIC2Q16515 512 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 CEP55Q53EZ4 464 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 SH3GL1Q99961 368 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 GUCY2CP25092 1073 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 NCOA7Q8NI08 942 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 RSAD2Q8WXG1 361 aa8.81□□□□□ -1
TRPS1-203ENST00000395715 BRD3Q15059 726 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 NOC4LQ9BVI4 516 aaKnown RBP8.8□□□□□ -1
TRPS1-203ENST00000395715 ZMYND8Q9ULU4 1186 aaPredicted RBP8.8□□□□□ -1
TRPS1-203ENST00000395715 EXOC5O00471 708 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 RRP36Q96EU6 259 aaKnown RBP8.8□□□□□ -1
TRPS1-203ENST00000395715 PSMB7Q99436 277 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 DCLK2Q8N568 766 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 IGSF22Q8N9C0 903 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 FBXL13Q8NEE6 735 aa8.8□□□□□ -1
TRPS1-203ENST00000395715 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms