RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 NT5DC1Q5TFE4 455 aa18.67■□□□□ 0.58
CNP-201ENST00000393888 RASGRP2Q7LDG7 609 aa18.67■□□□□ 0.58
CNP-201ENST00000393888 ECM29Q5VYK3 1845 aa18.66■□□□□ 0.58
CNP-201ENST00000393888 POTEB2H3BUK9 544 aa18.66■□□□□ 0.58
CNP-201ENST00000393888 RNF225M0QZC1 329 aaPredicted RBP18.66■□□□□ 0.58
CNP-201ENST00000393888 MFAP3LO75121 409 aa18.66■□□□□ 0.58
CNP-201ENST00000393888 ZFYP08048 801 aaPredicted RBP18.66■□□□□ 0.58
CNP-201ENST00000393888 ATF3P18847 181 aa18.66■□□□□ 0.58
CNP-201ENST00000393888 RGPD5Q99666 1765 aa18.66■□□□□ 0.58
CNP-201ENST00000393888 ACTN4O43707 911 aaKnown RBP18.66■□□□□ 0.58
CNP-201ENST00000393888 SSRP1Q08945 709 aaKnown RBP18.66■□□□□ 0.58
CNP-201ENST00000393888 TMEM67Q5HYA8 995 aa18.66■□□□□ 0.58
CNP-201ENST00000393888 DDX17Q92841 729 aaKnown RBP18.66■□□□□ 0.58
CNP-201ENST00000393888 CSRNP2Q9H175 543 aa18.66■□□□□ 0.58
CNP-201ENST00000393888 XIRP1Q702N8 1843 aaKnown RBP18.66■□□□□ 0.58
CNP-201ENST00000393888 GYPCP04921 128 aa18.65■□□□□ 0.58
CNP-201ENST00000393888 PTPREP23469 700 aa18.65■□□□□ 0.58
CNP-201ENST00000393888 AKAP17AQ02040 695 aaKnown RBP18.65■□□□□ 0.58
CNP-201ENST00000393888 RIN2Q8WYP3 895 aaPredicted RBP18.65■□□□□ 0.58
CNP-201ENST00000393888 STAMQ92783 540 aa18.65■□□□□ 0.58
CNP-201ENST00000393888 NAPGQ99747 312 aaPredicted RBP18.65■□□□□ 0.58
CNP-201ENST00000393888 TRIM10Q9UDY6 481 aa18.65■□□□□ 0.58
CNP-201ENST00000393888 ERVK-24P63145 666 aa18.65■□□□□ 0.58
CNP-201ENST00000393888 TTC31Q49AM3 519 aaPredicted RBP18.65■□□□□ 0.58
CNP-201ENST00000393888 GOLGA6L1Q8N7Z2 621 aa18.65■□□□□ 0.58
CNP-201ENST00000393888 IGDCC4Q8TDY8 1250 aa18.65■□□□□ 0.58
CNP-201ENST00000393888 SLF1Q9BQI6 1058 aa18.65■□□□□ 0.58
CNP-201ENST00000393888 ZKSCAN3Q9BRR0 538 aa18.65■□□□□ 0.58
CNP-201ENST00000393888 LY9Q9HBG7 655 aa18.65■□□□□ 0.58
CNP-201ENST00000393888 ADD3Q9UEY8 706 aaKnown RBP18.65■□□□□ 0.58
CNP-201ENST00000393888 A0A087X0B3 334 aa18.64■□□□□ 0.57
CNP-201ENST00000393888 ENC1O14682 589 aa18.64■□□□□ 0.57
CNP-201ENST00000393888 A1BGP04217 495 aa18.64■□□□□ 0.57
CNP-201ENST00000393888 GTF2A1P52655 376 aaPredicted RBP18.64■□□□□ 0.57
CNP-201ENST00000393888 IRX3P78415 501 aaPredicted RBP18.64■□□□□ 0.57
CNP-201ENST00000393888 NOM1Q5C9Z4 860 aaKnown RBP18.64■□□□□ 0.57
CNP-201ENST00000393888 FAM71BQ8TC56 605 aa18.64■□□□□ 0.57
CNP-201ENST00000393888 OXER1Q8TDS5 423 aa18.64■□□□□ 0.57
CNP-201ENST00000393888 TOMM22Q9NS69 142 aa18.64■□□□□ 0.57
CNP-201ENST00000393888 DDX60Q8IY21 1712 aaKnown RBP18.64■□□□□ 0.57
CNP-201ENST00000393888 SYNRGQ9UMZ2 1314 aa18.64■□□□□ 0.57
CNP-201ENST00000393888 MAGEA9P43362 315 aa18.64■□□□□ 0.57
CNP-201ENST00000393888 CTDSPL2Q05D32 466 aa18.64■□□□□ 0.57
CNP-201ENST00000393888 CCDC57Q2TAC2 916 aa18.64■□□□□ 0.57
CNP-201ENST00000393888 EPSTI1Q96J88 318 aa18.64■□□□□ 0.57
CNP-201ENST00000393888 HDAC6Q9UBN7 1215 aa18.64■□□□□ 0.57
CNP-201ENST00000393888 TFR2Q9UP52 801 aa18.64■□□□□ 0.57
CNP-201ENST00000393888 RNF40O75150 1001 aa18.63■□□□□ 0.57
CNP-201ENST00000393888 ZMYND10O75800 440 aa18.63■□□□□ 0.57
CNP-201ENST00000393888 IDH1O75874 414 aaKnown RBP18.63■□□□□ 0.57
CNP-201ENST00000393888 MMP1P03956 469 aa18.63■□□□□ 0.57
CNP-201ENST00000393888 TATP17735 454 aaPredicted RBP18.63■□□□□ 0.57
CNP-201ENST00000393888 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.63■□□□□ 0.57
CNP-201ENST00000393888 NAA15Q9BXJ9 866 aaKnown RBP18.63■□□□□ 0.57
CNP-201ENST00000393888 PBX1P40424 430 aa18.63■□□□□ 0.57
CNP-201ENST00000393888 MCAMP43121 646 aa18.63■□□□□ 0.57
CNP-201ENST00000393888 SPATA1Q5VX52 437 aa18.63■□□□□ 0.57
CNP-201ENST00000393888 HINFPQ9BQA5 517 aa18.63■□□□□ 0.57
CNP-201ENST00000393888 ZNF330Q9Y3S2 320 aaPredicted RBP18.63■□□□□ 0.57
CNP-201ENST00000393888 SLC12A7Q9Y666 1083 aa18.63■□□□□ 0.57
CNP-201ENST00000393888 WDR19Q8NEZ3 1342 aa18.62■□□□□ 0.57
CNP-201ENST00000393888 FAM205CA6NFA0 338 aa18.62■□□□□ 0.57
CNP-201ENST00000393888 IFIT3O14879 490 aaKnown RBP18.62■□□□□ 0.57
CNP-201ENST00000393888 ARHGAP25P42331 645 aa18.62■□□□□ 0.57
CNP-201ENST00000393888 SAFBQ15424 915 aaKnown RBP eCLIP18.62■□□□□ 0.57
CNP-201ENST00000393888 IFNL2Q8IZJ0 200 aa18.62■□□□□ 0.57
CNP-201ENST00000393888 VPS16Q9H269 839 aa18.62■□□□□ 0.57
CNP-201ENST00000393888 CABP5Q9NP86 173 aa18.62■□□□□ 0.57
CNP-201ENST00000393888 MYO6Q9UM54 1294 aa18.62■□□□□ 0.57
CNP-201ENST00000393888 SCN11AQ9UI33 1791 aa18.62■□□□□ 0.57
CNP-201ENST00000393888 CYP27B1O15528 508 aa18.62■□□□□ 0.57
CNP-201ENST00000393888 CIAO1O76071 339 aa18.62■□□□□ 0.57
CNP-201ENST00000393888 ERCC5P28715 1186 aaPredicted RBP18.62■□□□□ 0.57
CNP-201ENST00000393888 CABP4P57796 275 aa18.62■□□□□ 0.57
CNP-201ENST00000393888 ICE2Q659A1 982 aa18.62■□□□□ 0.57
CNP-201ENST00000393888 GUCA1BQ9UMX6 200 aa18.62■□□□□ 0.57
CNP-201ENST00000393888 SRGAP2O75044 1071 aa18.61■□□□□ 0.57
CNP-201ENST00000393888 RPS6KA5O75582 802 aa18.61■□□□□ 0.57
CNP-201ENST00000393888 SYF2O95926 243 aaKnown RBP18.61■□□□□ 0.57
CNP-201ENST00000393888 DPYDQ12882 1025 aa18.61■□□□□ 0.57
CNP-201ENST00000393888 TAF7LQ5H9L4 462 aa18.61■□□□□ 0.57
CNP-201ENST00000393888 RRP12Q5JTH9 1297 aaKnown RBP18.61■□□□□ 0.57
CNP-201ENST00000393888 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.61■□□□□ 0.57
CNP-201ENST00000393888 TICAM2Q86XR7 235 aa18.61■□□□□ 0.57
CNP-201ENST00000393888 TRIML1Q8N9V2 468 aa18.61■□□□□ 0.57
CNP-201ENST00000393888 ZSWIM5Q9P217 1185 aa18.61■□□□□ 0.57
CNP-201ENST00000393888 WWC3Q9ULE0 1092 aa18.61■□□□□ 0.57
CNP-201ENST00000393888 CUL4BQ13620 913 aa18.61■□□□□ 0.57
CNP-201ENST00000393888 GSPT2Q8IYD1 628 aaKnown RBP18.61■□□□□ 0.57
CNP-201ENST00000393888 ELOA2Q8IYF1 753 aaPredicted RBP18.61■□□□□ 0.57
CNP-201ENST00000393888 DRC1Q96MC2 740 aa18.61■□□□□ 0.57
CNP-201ENST00000393888 NUP88Q99567 741 aaPredicted RBP18.61■□□□□ 0.57
CNP-201ENST00000393888 TTF2Q9UNY4 1162 aaKnown RBP18.61■□□□□ 0.57
CNP-201ENST00000393888 TACC3Q9Y6A5 838 aa18.61■□□□□ 0.57
CNP-201ENST00000393888 ADAMTS7Q9UKP4 1686 aa18.6■□□□□ 0.57
CNP-201ENST00000393888 FMNL1O95466 1100 aaPredicted RBP18.6■□□□□ 0.57
CNP-201ENST00000393888 PIP4K2BP78356 416 aa18.6■□□□□ 0.57
CNP-201ENST00000393888 WHAMMP3Q1A5X7 153 aa18.6■□□□□ 0.57
CNP-201ENST00000393888 FILIP1LQ4L180 1135 aa18.6■□□□□ 0.57
CNP-201ENST00000393888 CHP1Q99653 195 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms