RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 RBM28Q9NW13 759 aaKnown RBP10.45□□□□□ -0.74
TDP1-202ENST00000393452 PRPF3O43395 683 aaKnown RBP10.44□□□□□ -0.74
TDP1-202ENST00000393452 CUTAO60888 179 aa10.44□□□□□ -0.74
TDP1-202ENST00000393452 EVX2Q03828 476 aa10.44□□□□□ -0.74
TDP1-202ENST00000393452 PKN1Q16512 942 aa10.44□□□□□ -0.74
TDP1-202ENST00000393452 RILPL1Q5EBL4 403 aa10.44□□□□□ -0.74
TDP1-202ENST00000393452 RESP18Q5W5W9 173 aa10.44□□□□□ -0.74
TDP1-202ENST00000393452 DHX40Q8IX18 779 aaKnown RBP10.44□□□□□ -0.74
TDP1-202ENST00000393452 CEP57L1Q8IYX8 460 aa10.44□□□□□ -0.74
TDP1-202ENST00000393452 CCDC82Q8N4S0 544 aa10.44□□□□□ -0.74
TDP1-202ENST00000393452 TRIM5Q9C035 493 aa10.44□□□□□ -0.74
TDP1-202ENST00000393452 KCNJ14Q9UNX9 436 aa10.44□□□□□ -0.74
TDP1-202ENST00000393452 BRWD3Q6RI45 1802 aa10.44□□□□□ -0.74
TDP1-202ENST00000393452 SERPINB2P05120 415 aa10.44□□□□□ -0.74
TDP1-202ENST00000393452 LDHBP07195 334 aaKnown RBP10.44□□□□□ -0.74
TDP1-202ENST00000393452 SLC3A2P08195 630 aaKnown RBP10.44□□□□□ -0.74
TDP1-202ENST00000393452 CDC25BP30305 580 aa10.44□□□□□ -0.74
TDP1-202ENST00000393452 TERF1P54274 439 aa10.44□□□□□ -0.74
TDP1-202ENST00000393452 PPP4CP60510 307 aa10.44□□□□□ -0.74
TDP1-202ENST00000393452 RBM6P78332 1123 aaKnown RBP10.44□□□□□ -0.74
TDP1-202ENST00000393452 ZNF804AQ7Z570 1209 aa10.44□□□□□ -0.74
TDP1-202ENST00000393452 RPGRQ92834 1020 aaKnown RBP10.44□□□□□ -0.74
TDP1-202ENST00000393452 ERCC4Q92889 916 aaPredicted RBP10.44□□□□□ -0.74
TDP1-202ENST00000393452 SHISA4Q96DD7 197 aa10.44□□□□□ -0.74
TDP1-202ENST00000393452 NAP1L5Q96NT1 182 aaPredicted RBP10.44□□□□□ -0.74
TDP1-202ENST00000393452 KCNF1Q9H3M0 494 aa10.44□□□□□ -0.74
TDP1-202ENST00000393452 MORC2Q9Y6X9 1032 aaPredicted RBP10.44□□□□□ -0.74
TDP1-202ENST00000393452 GOLGA6L19H0YKK7 550 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 HOXA10P31260 410 aaPredicted RBP10.43□□□□□ -0.74
TDP1-202ENST00000393452 SYKP43405 635 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 PDE4BQ07343 736 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 BPIFA3Q9BQP9 254 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 NAT10Q9H0A0 1025 aaKnown RBP10.43□□□□□ -0.74
TDP1-202ENST00000393452 QTRT2Q9H974 415 aaKnown RBP10.43□□□□□ -0.74
TDP1-202ENST00000393452 JAG2Q9Y219 1238 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 CDK5RAP2Q96SN8 1893 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 ROBO3Q96MS0 1386 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 BAZ2BQ9UIF8 2168 aaKnown RBP10.43□□□□□ -0.74
TDP1-202ENST00000393452 A0A087WWV3 80 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 KLRG2A4D1S0 409 aaPredicted RBP10.43□□□□□ -0.74
TDP1-202ENST00000393452 CYP2D6P10635 497 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 ST5P78524 1137 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 GPSM2P81274 684 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 NR5A1Q13285 461 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 C12orf60Q5U649 245 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 TMTC3Q6ZXV5 915 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 ELOA2Q8IYF1 753 aaPredicted RBP10.43□□□□□ -0.74
TDP1-202ENST00000393452 KRI1Q8N9T8 703 aaKnown RBP10.43□□□□□ -0.74
TDP1-202ENST00000393452 SPC24Q8NBT2 197 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 CLIC6Q96NY7 704 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 PHF20Q9BVI0 1012 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 SPTLC3Q9NUV7 552 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 MCM9Q9NXL9 1143 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 PODXL2Q9NZ53 605 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 TUBE1Q9UJT0 475 aa10.43□□□□□ -0.74
TDP1-202ENST00000393452 LTBP1Q14766 1721 aa10.42□□□□□ -0.74
TDP1-202ENST00000393452 BBOX1O75936 387 aa10.42□□□□□ -0.74
TDP1-202ENST00000393452 PLEKHA8P1O95397 391 aa10.42□□□□□ -0.74
TDP1-202ENST00000393452 IL1R1P14778 569 aa10.42□□□□□ -0.74
TDP1-202ENST00000393452 XBP1P17861 261 aa10.42□□□□□ -0.74
TDP1-202ENST00000393452 PTPREP23469 700 aa10.42□□□□□ -0.74
TDP1-202ENST00000393452 ATP2B4P23634 1241 aa10.42□□□□□ -0.74
TDP1-202ENST00000393452 GSTO1P78417 241 aa10.42□□□□□ -0.74
TDP1-202ENST00000393452 AKAP17AQ02040 695 aaKnown RBP10.42□□□□□ -0.74
TDP1-202ENST00000393452 GRIK5Q16478 980 aa10.42□□□□□ -0.74
TDP1-202ENST00000393452 RCSD1Q6JBY9 416 aa10.42□□□□□ -0.74
TDP1-202ENST00000393452 KIAA1524Q8TCG1 905 aa10.42□□□□□ -0.74
TDP1-202ENST00000393452 OXER1Q8TDS5 423 aa10.42□□□□□ -0.74
TDP1-202ENST00000393452 MRFAP1L1Q96HT8 127 aa10.42□□□□□ -0.74
TDP1-202ENST00000393452 LRRC37AA6NMS7 1700 aa10.42□□□□□ -0.74
TDP1-202ENST00000393452 NAV1Q8NEY1 1877 aa10.42□□□□□ -0.74
TDP1-202ENST00000393452 BECN2A8MW95 431 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 NMT2O60551 498 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 USP17L8P0C7I0 530 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 DDR1Q08345 913 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 DPCR1Q3MIW9 517 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 CERS3Q8IU89 383 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 ZNF579Q8NAF0 562 aaKnown RBP10.41□□□□□ -0.74
TDP1-202ENST00000393452 RBM17Q96I25 401 aaKnown RBP10.41□□□□□ -0.74
TDP1-202ENST00000393452 CD209Q9NNX6 404 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 FBXO2Q9UK22 296 aaPredicted RBP10.41□□□□□ -0.74
TDP1-202ENST00000393452 V9GY48 417 aaPredicted RBP10.41□□□□□ -0.74
TDP1-202ENST00000393452 CNTNAP5Q8WYK1 1306 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 POLRMTO00411 1230 aaKnown RBP10.41□□□□□ -0.74
TDP1-202ENST00000393452 BAG3O95817 575 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 LDHCP07864 332 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 NLRP12P59046 1061 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 NOLC1Q14978 699 aaKnown RBP eCLIP10.41□□□□□ -0.74
TDP1-202ENST00000393452 DIXDC1Q155Q3 683 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 NPY5RQ15761 445 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 FAM47AQ5JRC9 791 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 KRT27Q7Z3Y8 459 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 SH3RF3Q8TEJ3 882 aaPredicted RBP10.41□□□□□ -0.74
TDP1-202ENST00000393452 UBE2Q2Q8WVN8 375 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 ANKS1AQ92625 1134 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 CRAMP1Q96RY5 1269 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 TAOK2Q9UL54 1235 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 KCNH3Q9ULD8 1083 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 PCDHB6Q9Y5E3 794 aa10.41□□□□□ -0.74
TDP1-202ENST00000393452 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms