RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 SHDQ96IW2 340 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 CCDC138Q96M89 665 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 TBCBQ99426 244 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 LIN7BQ9HAP6 207 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 SCHIP1Q9P0W5 487 aaPredicted RBP4.19□□□□□ -1.74
XRN1-202ENST00000392981 RTCBQ9Y3I0 505 aaKnown RBP4.19□□□□□ -1.74
XRN1-202ENST00000392981 XYLBO75191 536 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 GRM3Q14832 879 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 AGAP9Q5VTM2 703 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 XRRA1Q6P2D8 792 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 NBPF10Q6P3W6 841 aaKnown RBP4.18□□□□□ -1.74
XRN1-202ENST00000392981 TTC6Q86TZ1 520 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 IQCA1Q86XH1 822 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 THNSL2Q86YJ6 484 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 TEX11Q8IYF3 940 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 ZSCAN1Q8NBB4 408 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 NT5C1AQ9BXI3 368 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 BRD9Q9H8M2 597 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 RPGRIP1LQ68CZ1 1315 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 TRBV23-1A0A0A0MS06 115 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 CHGBP05060 677 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 PHACTR4Q8IZ21 702 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 TIGD1Q96MW7 591 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 CDH19Q9H159 772 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 NOP56O00567 594 aaKnown RBP4.18□□□□□ -1.74
XRN1-202ENST00000392981 ATMINO43313 823 aaPredicted RBP4.18□□□□□ -1.74
XRN1-202ENST00000392981 DKK1O94907 266 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 PYGLP06737 847 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 NPR3P17342 541 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 IARSP41252 1262 aaKnown RBP4.18□□□□□ -1.74
XRN1-202ENST00000392981 LRRC69Q6ZNQ3 347 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 C4orf50Q6ZRC1 276 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 WNK4Q96J92 1243 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 SUV39H2Q9H5I1 410 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 TRAV20A0A0B4J274 112 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 PRSS47A8MTI9 375 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 PRODHO43272 600 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 PGRP06401 933 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 VDRP11473 427 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 SMARCA1P28370 1054 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 SOX9P48436 509 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 CCT5P48643 541 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 PPP2R3AQ06190 1150 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 TDRD10Q5VZ19 366 aaKnown RBP4.18□□□□□ -1.74
XRN1-202ENST00000392981 LHFPL2Q6ZUX7 228 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 TAB3Q8N5C8 712 aaPredicted RBP4.18□□□□□ -1.74
XRN1-202ENST00000392981 ERP27Q96DN0 273 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 ZFRQ96KR1 1074 aaKnown RBP4.18□□□□□ -1.74
XRN1-202ENST00000392981 OCSTAMPQ9BR26 566 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 VPS11Q9H270 941 aa4.18□□□□□ -1.74
XRN1-202ENST00000392981 TRPA1O75762 1119 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 RBP3P10745 1247 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 IMPDH2P12268 514 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 HSPA6P17066 643 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 XBP1P17861 261 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 RELBQ01201 579 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 SMAD1Q15797 465 aaKnown RBP4.17□□□□□ -1.74
XRN1-202ENST00000392981 TM4SF20Q53R12 229 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 PIK3R6Q5UE93 754 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 HGSNATQ68CP4 663 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 FAM180BQ6P0A1 224 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 TTLL7Q6ZT98 887 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 ANKK1Q8NFD2 765 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 MAGEB10Q96LZ2 347 aaPredicted RBP4.17□□□□□ -1.74
XRN1-202ENST00000392981 ZSCAN10Q96SZ4 725 aaPredicted RBP4.17□□□□□ -1.74
XRN1-202ENST00000392981 DHRS4Q9BTZ2 278 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 LRFN1Q9P244 771 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 ZNF131P52739 623 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 SLMAPQ14BN4 828 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 HIF1AQ16665 826 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 TIGD6Q17RP2 521 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 FAM26DQ5JW98 314 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 PKN3Q6P5Z2 889 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 SEPT12Q8IYM1 358 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 ZNF511Q8NB15 262 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 SPATA5Q8NB90 893 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 ADCY4Q8NFM4 1077 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 CCDC47Q96A33 483 aaKnown RBP4.17□□□□□ -1.74
XRN1-202ENST00000392981 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.17□□□□□ -1.746e-7■■■□□ 16.2
XRN1-202ENST00000392981 SIL1Q9H173 461 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 FAM204AQ9H8W3 233 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 RTEL1Q9NZ71 1219 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 TMEM63CQ9P1W3 806 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 PEG3Q9GZU2 1588 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 B4DLN1 442 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 MAP3K6O95382 1288 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 ID4P47928 161 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 DHX9Q08211 1270 aaKnown RBP4.17□□□□□ -1.74
XRN1-202ENST00000392981 TRIM29Q14134 588 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 SKOR2Q2VWA4 1001 aaPredicted RBP4.17□□□□□ -1.74
XRN1-202ENST00000392981 C1orf53Q5VUE5 145 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 NXPE1Q8N323 547 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 MICALL1Q8N3F8 863 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 C1orf127Q8N9H9 656 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 ZNF784Q8NCA9 323 aaPredicted RBP4.17□□□□□ -1.74
XRN1-202ENST00000392981 SPATA17Q96L03 361 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 ZSCAN31Q96LW9 406 aaPredicted RBP4.17□□□□□ -1.74
XRN1-202ENST00000392981 MYLK2Q9H1R3 596 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 DACH1Q9UI36 760 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 RABGEF1Q9UJ41 708 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms