RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 USP32Q8NFA0 1604 aa18.72■□□□□ 0.59
SNX9-201ENST00000392185 KIF4BQ2VIQ3 1234 aa18.71■□□□□ 0.59
SNX9-201ENST00000392185 GPT2Q8TD30 523 aa18.71■□□□□ 0.59
SNX9-201ENST00000392185 ZSCAN12O43309 604 aa18.71■□□□□ 0.59
SNX9-201ENST00000392185 YEATS4O95619 227 aa18.71■□□□□ 0.59
SNX9-201ENST00000392185 TRIM21P19474 475 aaKnown RBP18.71■□□□□ 0.59
SNX9-201ENST00000392185 PTGS1P23219 599 aa18.71■□□□□ 0.59
SNX9-201ENST00000392185 KIF18AQ8NI77 898 aa18.71■□□□□ 0.59
SNX9-201ENST00000392185 USP8P40818 1118 aa18.71■□□□□ 0.59
SNX9-201ENST00000392185 ZNF408Q9H9D4 720 aa18.71■□□□□ 0.59
SNX9-201ENST00000392185 NONOQ15233 471 aaKnown RBP eCLIP18.71■□□□□ 0.581e-6■■□□□ 13.1
SNX9-201ENST00000392185 SKIDA1Q1XH10 827 aa18.71■□□□□ 0.58
SNX9-201ENST00000392185 NOSTRINQ8IVI9 506 aa18.71■□□□□ 0.58
SNX9-201ENST00000392185 FNBP4Q8N3X1 1017 aaPredicted RBP18.71■□□□□ 0.58
SNX9-201ENST00000392185 LINC00116Q8NCU8 138 aa18.71■□□□□ 0.58
SNX9-201ENST00000392185 CUTAO60888 179 aa18.7■□□□□ 0.58
SNX9-201ENST00000392185 KAZALD1Q96I82 304 aa18.7■□□□□ 0.58
SNX9-201ENST00000392185 RUFY1Q96T51 708 aa18.7■□□□□ 0.58
SNX9-201ENST00000392185 HOMER2Q9NSB8 354 aa18.7■□□□□ 0.58
SNX9-201ENST00000392185 ARHGAP23Q9P227 1491 aa18.7■□□□□ 0.58
SNX9-201ENST00000392185 SMCO2A6NFE2 343 aa18.7■□□□□ 0.58
SNX9-201ENST00000392185 CHMP2AO43633 222 aa18.7■□□□□ 0.58
SNX9-201ENST00000392185 CFBP00751 764 aa18.7■□□□□ 0.58
SNX9-201ENST00000392185 BIN2Q9UBW5 565 aaPredicted RBP18.7■□□□□ 0.58
SNX9-201ENST00000392185 CAMTA2O94983 1202 aa18.7■□□□□ 0.58
SNX9-201ENST00000392185 NKX1-1Q15270 411 aaPredicted RBP18.7■□□□□ 0.58
SNX9-201ENST00000392185 RBM6P78332 1123 aaKnown RBP18.69■□□□□ 0.58
SNX9-201ENST00000392185 CLIC6Q96NY7 704 aa18.69■□□□□ 0.58
SNX9-201ENST00000392185 IL25Q9H293 177 aa18.69■□□□□ 0.58
SNX9-201ENST00000392185 ITSN1Q15811 1721 aa18.69■□□□□ 0.58
SNX9-201ENST00000392185 MYO5BQ9ULV0 1848 aa18.69■□□□□ 0.58
SNX9-201ENST00000392185 CPDO75976 1380 aa18.69■□□□□ 0.58
SNX9-201ENST00000392185 HSP90B2PQ58FF3 399 aa18.69■□□□□ 0.58
SNX9-201ENST00000392185 SPATA31A5Q5VU36 1347 aa18.69■□□□□ 0.58
SNX9-201ENST00000392185 SPATA31A7Q8IWB4 1347 aa18.69■□□□□ 0.58
SNX9-201ENST00000392185 REXO1Q8N1G1 1221 aaKnown RBP18.69■□□□□ 0.58
SNX9-201ENST00000392185 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.69■□□□□ 0.58
SNX9-201ENST00000392185 CYP2D6P10635 497 aa18.69■□□□□ 0.58
SNX9-201ENST00000392185 CACNB3P54284 484 aa18.69■□□□□ 0.58
SNX9-201ENST00000392185 ZNF445P59923 1031 aa18.69■□□□□ 0.58
SNX9-201ENST00000392185 GAS2L3Q86XJ1 694 aa18.69■□□□□ 0.58
SNX9-201ENST00000392185 CNKSR2Q8WXI2 1034 aa18.69■□□□□ 0.58
SNX9-201ENST00000392185 CERKLQ49MI3 558 aaPredicted RBP18.68■□□□□ 0.58
SNX9-201ENST00000392185 ZNF34Q8IZ26 560 aa18.68■□□□□ 0.58
SNX9-201ENST00000392185 UBXN4Q92575 508 aa18.68■□□□□ 0.58
SNX9-201ENST00000392185 LRRC27Q9C0I9 530 aa18.68■□□□□ 0.58
SNX9-201ENST00000392185 SLIT1O75093 1534 aa18.68■□□□□ 0.58
SNX9-201ENST00000392185 NF2P35240 595 aa18.68■□□□□ 0.58
SNX9-201ENST00000392185 CBX8Q9HC52 389 aa18.68■□□□□ 0.58
SNX9-201ENST00000392185 CLIC4Q9Y696 253 aa18.68■□□□□ 0.58
SNX9-201ENST00000392185 PXDNQ92626 1479 aa18.68■□□□□ 0.58
SNX9-201ENST00000392185 NEMFO60524 1076 aa18.68■□□□□ 0.58
SNX9-201ENST00000392185 ADCY7P51828 1080 aa18.68■□□□□ 0.58
SNX9-201ENST00000392185 PPP4R3AQ6IN85 833 aa18.68■□□□□ 0.58
SNX9-201ENST00000392185 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.68■□□□□ 0.583e-8■■■■■ 27.2
SNX9-201ENST00000392185 C21orf2O43822 256 aa18.67■□□□□ 0.58
SNX9-201ENST00000392185 MYL5Q02045 173 aa18.67■□□□□ 0.58
SNX9-201ENST00000392185 INF2Q27J81 1249 aa18.67■□□□□ 0.58
SNX9-201ENST00000392185 CCDC174Q6PII3 467 aa18.67■□□□□ 0.58
SNX9-201ENST00000392185 NSMFQ6X4W1 530 aa18.67■□□□□ 0.58
SNX9-201ENST00000392185 SH2D4AQ9H788 454 aa18.67■□□□□ 0.58
SNX9-201ENST00000392185 KIF5CO60282 957 aa18.67■□□□□ 0.58
SNX9-201ENST00000392185 WDHD1O75717 1129 aaPredicted RBP18.67■□□□□ 0.58
SNX9-201ENST00000392185 RAD51AP2Q09MP3 1159 aa18.67■□□□□ 0.58
SNX9-201ENST00000392185 TBC1D10CQ8IV04 446 aa18.67■□□□□ 0.58
SNX9-201ENST00000392185 PICK1Q9NRD5 415 aa18.67■□□□□ 0.58
SNX9-201ENST00000392185 PCDHA7Q9UN72 937 aa18.67■□□□□ 0.58
SNX9-201ENST00000392185 SCG2P13521 617 aa18.67■□□□□ 0.58
SNX9-201ENST00000392185 ERCC3P19447 782 aa18.67■□□□□ 0.58
SNX9-201ENST00000392185 SPICE1Q8N0Z3 855 aa18.67■□□□□ 0.58
SNX9-201ENST00000392185 KIFC2Q96AC6 838 aa18.67■□□□□ 0.58
SNX9-201ENST00000392185 KIF2CQ99661 725 aa18.67■□□□□ 0.58
SNX9-201ENST00000392185 RASGRP4Q8TDF6 673 aa18.67■□□□□ 0.58
SNX9-201ENST00000392185 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.66■□□□□ 0.58
SNX9-201ENST00000392185 ZKSCAN5Q9Y2L8 839 aa18.66■□□□□ 0.58
SNX9-201ENST00000392185 USP17L3A6NCW0 530 aa18.66■□□□□ 0.58
SNX9-201ENST00000392185 USP17L4A6NCW7 530 aa18.66■□□□□ 0.58
SNX9-201ENST00000392185 PFKFB1P16118 471 aa18.66■□□□□ 0.58
SNX9-201ENST00000392185 CCT6AP40227 531 aaKnown RBP18.66■□□□□ 0.58
SNX9-201ENST00000392185 SPAG1Q07617 926 aa18.66■□□□□ 0.58
SNX9-201ENST00000392185 NR5A1Q13285 461 aa18.66■□□□□ 0.58
SNX9-201ENST00000392185 TOB2Q14106 344 aaPredicted RBP18.66■□□□□ 0.58
SNX9-201ENST00000392185 USP17L1Q7RTZ2 530 aa18.66■□□□□ 0.58
SNX9-201ENST00000392185 FAM114A1Q8IWE2 563 aa18.66■□□□□ 0.58
SNX9-201ENST00000392185 FAM84BQ96KN1 310 aaPredicted RBP18.66■□□□□ 0.58
SNX9-201ENST00000392185 RFX5P48382 616 aaPredicted RBP18.66■□□□□ 0.58
SNX9-201ENST00000392185 ADALQ6DHV7 355 aa18.66■□□□□ 0.58
SNX9-201ENST00000392185 ZSWIM4Q9H7M6 989 aa18.66■□□□□ 0.58
SNX9-201ENST00000392185 CD209Q9NNX6 404 aa18.66■□□□□ 0.58
SNX9-201ENST00000392185 LRWD1Q9UFC0 647 aa18.66■□□□□ 0.58
SNX9-201ENST00000392185 CARMIL3Q8ND23 1372 aa18.66■□□□□ 0.58
SNX9-201ENST00000392185 SH2B2O14492 632 aaPredicted RBP18.65■□□□□ 0.58
SNX9-201ENST00000392185 AKR1B10O60218 316 aa18.65■□□□□ 0.58
SNX9-201ENST00000392185 NPR1P16066 1061 aa18.65■□□□□ 0.58
SNX9-201ENST00000392185 SSR1P43307 286 aaKnown RBP18.65■□□□□ 0.58
SNX9-201ENST00000392185 ICA1Q05084 483 aa18.65■□□□□ 0.58
SNX9-201ENST00000392185 KRT25Q7Z3Z0 450 aa18.65■□□□□ 0.58
SNX9-201ENST00000392185 BLIDQ8IZY5 108 aa18.65■□□□□ 0.58
SNX9-201ENST00000392185 SERTAD1Q9UHV2 236 aa18.65■□□□□ 0.58
SNX9-201ENST00000392185 A0A087WWV3 80 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 1442.6 ms