RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 FAM8A1Q9UBU6 413 aa2.86□□□□□ -1.95
RNU6-440P-201ENST00000390882 SOX13Q9UN79 622 aa2.86□□□□□ -1.95
RNU6-440P-201ENST00000390882 PLAGL2Q9UPG8 496 aa2.86□□□□□ -1.95
RNU6-440P-201ENST00000390882 AKAP2Q9Y2D5 859 aa2.86□□□□□ -1.95
RNU6-440P-201ENST00000390882 METTL12A8MUP2 240 aa2.85□□□□□ -1.95
RNU6-440P-201ENST00000390882 FAM87AP0C7U9 286 aa2.85□□□□□ -1.95
RNU6-440P-201ENST00000390882 TNFRSF1AP19438 455 aa2.85□□□□□ -1.95
RNU6-440P-201ENST00000390882 IKBKEQ14164 716 aa2.85□□□□□ -1.95
RNU6-440P-201ENST00000390882 ZNF385BQ569K4 471 aa2.85□□□□□ -1.95
RNU6-440P-201ENST00000390882 DYMQ7RTS9 669 aa2.85□□□□□ -1.95
RNU6-440P-201ENST00000390882 VN1R5Q7Z5H4 357 aa2.85□□□□□ -1.95
RNU6-440P-201ENST00000390882 DDX54Q8TDD1 881 aaKnown RBP2.85□□□□□ -1.95
RNU6-440P-201ENST00000390882 FAM161BQ96MY7 647 aa2.85□□□□□ -1.95
RNU6-440P-201ENST00000390882 CLEC4MQ9H2X3 399 aaPredicted RBP2.85□□□□□ -1.95
RNU6-440P-201ENST00000390882 ABCB6Q9NP58 842 aa2.85□□□□□ -1.95
RNU6-440P-201ENST00000390882 PALD1Q9ULE6 856 aa2.85□□□□□ -1.95
RNU6-440P-201ENST00000390882 DAGLAQ9Y4D2 1042 aa2.85□□□□□ -1.95
RNU6-440P-201ENST00000390882 GRIN3BO60391 1043 aa2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 USP17L7P0C7H9 530 aa2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 ESRRAP11474 423 aaPredicted RBP2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 VAMP1P23763 118 aa2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 GDNFP39905 211 aa2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 ASPAP45381 313 aa2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 OXCT1P55809 520 aa2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 PCDH1Q08174 1060 aa2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 TAF1CQ15572 869 aaPredicted RBP2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 ZNF423Q2M1K9 1284 aa2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 C3orf58Q8NDZ4 430 aa2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 ANKRD24Q8TF21 1146 aa2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 MRRFQ96E11 262 aaKnown RBP2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 TEPSINQ96N21 525 aa2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 MRIQ9BWK5 157 aa2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 TNKS2Q9H2K2 1166 aa2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 ZNF576Q9H609 170 aa2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 SOX17Q9H6I2 414 aaPredicted RBP2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 LGR6Q9HBX8 967 aa2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 FAM105AQ9NUU6 356 aa2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 VTI1BQ9UEU0 232 aa2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 CNOT6Q9ULM6 557 aaKnown RBP2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 U3KQE9 123 aa2.84□□□□□ -1.95
RNU6-440P-201ENST00000390882 USP31Q70CQ4 1352 aa2.84□□□□□ -1.96
RNU6-440P-201ENST00000390882 UNCXA6NJT0 531 aa2.83□□□□□ -1.96
RNU6-440P-201ENST00000390882 B3GALT4O96024 378 aa2.83□□□□□ -1.96
RNU6-440P-201ENST00000390882 CTSHP09668 335 aa2.83□□□□□ -1.96
RNU6-440P-201ENST00000390882 RBM25P49756 843 aaKnown RBP2.83□□□□□ -1.96
RNU6-440P-201ENST00000390882 PPP2R3AQ06190 1150 aa2.83□□□□□ -1.96
RNU6-440P-201ENST00000390882 MRPL58Q14197 206 aaKnown RBP2.83□□□□□ -1.96
RNU6-440P-201ENST00000390882 HHIPL2Q6UWX4 724 aa2.83□□□□□ -1.96
RNU6-440P-201ENST00000390882 TMEM87AQ8NBN3 555 aa2.83□□□□□ -1.96
RNU6-440P-201ENST00000390882 BACH2Q9BYV9 841 aa2.83□□□□□ -1.96
RNU6-440P-201ENST00000390882 CEP44Q9C0F1 390 aa2.83□□□□□ -1.96
RNU6-440P-201ENST00000390882 GSX1Q9H4S2 264 aaPredicted RBP2.83□□□□□ -1.96
RNU6-440P-201ENST00000390882 SEMA3GQ9NS98 782 aa2.83□□□□□ -1.96
RNU6-440P-201ENST00000390882 TMEM39AQ9NV64 488 aa2.83□□□□□ -1.96
RNU6-440P-201ENST00000390882 PPM1HQ9ULR3 514 aa2.83□□□□□ -1.96
RNU6-440P-201ENST00000390882 E9PSI1 815 aa2.82□□□□□ -1.96
RNU6-440P-201ENST00000390882 CYP11A1P05108 521 aa2.82□□□□□ -1.96
RNU6-440P-201ENST00000390882 ST13P50502 369 aaKnown RBP2.82□□□□□ -1.96
RNU6-440P-201ENST00000390882 ZNF157P51786 506 aaPredicted RBP2.82□□□□□ -1.96
RNU6-440P-201ENST00000390882 DLG4P78352 724 aa2.82□□□□□ -1.96
RNU6-440P-201ENST00000390882 GSTM4Q03013 218 aa2.82□□□□□ -1.96
RNU6-440P-201ENST00000390882 FAAP100Q0VG06 881 aa2.82□□□□□ -1.96
RNU6-440P-201ENST00000390882 SV2BQ7L1I2 683 aa2.82□□□□□ -1.96
RNU6-440P-201ENST00000390882 NECAB3Q96P71 396 aaPredicted RBP2.82□□□□□ -1.96
RNU6-440P-201ENST00000390882 C19orf73Q9NVV2 129 aa2.82□□□□□ -1.96
RNU6-440P-201ENST00000390882 KIAA1522Q9P206 1035 aaPredicted RBP2.82□□□□□ -1.96
RNU6-440P-201ENST00000390882 GPN3Q9UHW5 284 aaPredicted RBP2.82□□□□□ -1.96
RNU6-440P-201ENST00000390882 TTF2Q9UNY4 1162 aaKnown RBP2.82□□□□□ -1.96
RNU6-440P-201ENST00000390882 SAMM50Q9Y512 469 aa2.82□□□□□ -1.96
RNU6-440P-201ENST00000390882 RFXAPO00287 272 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 ENC1O14682 589 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 RLBP1P12271 317 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 BMP6P22004 513 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 NME2P22392 152 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 ARNTP27540 789 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 AP3B2Q13367 1082 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 POU4F3Q15319 338 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 CCDC85BQ15834 202 aaPredicted RBP2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 TSNAXIP1Q2TAA8 658 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 CRB2Q5IJ48 1285 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 AKAP4Q5JQC9 854 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 HP1BP3Q5SSJ5 553 aaPredicted RBP2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 LDLRAD1Q5T700 205 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 MEI1Q5TIA1 1274 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 TPTE2Q6XPS3 522 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 RELL1Q8IUW5 271 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 ZDHHC14Q8IZN3 488 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 FEZF2Q8TBJ5 459 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 ZNF428Q96B54 188 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 NOC4LQ9BVI4 516 aaKnown RBP2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 EMILIN2Q9BXX0 1053 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 RAD18Q9NS91 495 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 CNOT11Q9UKZ1 510 aaKnown RBP2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 CYP8B1Q9UNU6 501 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 KCTD3Q9Y597 815 aa2.81□□□□□ -1.96
RNU6-440P-201ENST00000390882 ZC3H12DA2A288 527 aaKnown RBP2.8□□□□□ -1.96
RNU6-440P-201ENST00000390882 SCAMP3O14828 347 aaKnown RBP2.8□□□□□ -1.96
RNU6-440P-201ENST00000390882 MATN3O15232 486 aa2.8□□□□□ -1.96
RNU6-440P-201ENST00000390882 FBXO24O75426 580 aa2.8□□□□□ -1.96
RNU6-440P-201ENST00000390882 TGM1P22735 817 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms