RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 LETMD1Q6P1Q0 360 aa6.18□□□□□ -1.42
TRAV40-201ENST00000390467 BNC2Q6ZN30 1099 aaPredicted RBP6.18□□□□□ -1.42
TRAV40-201ENST00000390467 LRRN4CLQ8ND94 238 aa6.18□□□□□ -1.42
TRAV40-201ENST00000390467 JARID2Q92833 1246 aaPredicted RBP6.18□□□□□ -1.42
TRAV40-201ENST00000390467 GOLGA2P5Q9HBQ8 144 aa6.18□□□□□ -1.42
TRAV40-201ENST00000390467 VTI1BQ9UEU0 232 aa6.18□□□□□ -1.42
TRAV40-201ENST00000390467 TPX2Q9ULW0 747 aaKnown RBP6.18□□□□□ -1.42
TRAV40-201ENST00000390467 CORINQ9Y5Q5 1042 aa6.18□□□□□ -1.42
TRAV40-201ENST00000390467 SNX11Q9Y5W9 270 aa6.18□□□□□ -1.42
TRAV40-201ENST00000390467 SORBS3O60504 671 aa6.17□□□□□ -1.42
TRAV40-201ENST00000390467 PGRP06401 933 aa6.17□□□□□ -1.42
TRAV40-201ENST00000390467 ZNF865P0CJ78 1059 aaPredicted RBP6.17□□□□□ -1.42
TRAV40-201ENST00000390467 JUNBP17275 347 aaPredicted RBP6.17□□□□□ -1.42
TRAV40-201ENST00000390467 CLCN7P51798 805 aa6.17□□□□□ -1.42
TRAV40-201ENST00000390467 RPL6Q02878 288 aaKnown RBP6.17□□□□□ -1.42
TRAV40-201ENST00000390467 IKZF1Q13422 519 aa6.17□□□□□ -1.42
TRAV40-201ENST00000390467 TSNAXIP1Q2TAA8 658 aa6.17□□□□□ -1.42
TRAV40-201ENST00000390467 C22orf34Q6ZV56 151 aa6.17□□□□□ -1.42
TRAV40-201ENST00000390467 MRPL41Q8IXM3 137 aaKnown RBP6.17□□□□□ -1.42
TRAV40-201ENST00000390467 MFSD4AQ8N468 514 aa6.17□□□□□ -1.42
TRAV40-201ENST00000390467 MFSD2AQ8NA29 543 aa6.17□□□□□ -1.42
TRAV40-201ENST00000390467 RHOVQ96L33 236 aa6.17□□□□□ -1.42
TRAV40-201ENST00000390467 TACC3Q9Y6A5 838 aa6.17□□□□□ -1.42
TRAV40-201ENST00000390467 CARMIL2Q6F5E8 1435 aa6.16□□□□□ -1.42
TRAV40-201ENST00000390467 F13A1P00488 732 aa6.16□□□□□ -1.42
TRAV40-201ENST00000390467 TXKP42681 527 aa6.16□□□□□ -1.42
TRAV40-201ENST00000390467 SFRP5Q5T4F7 317 aa6.16□□□□□ -1.42
TRAV40-201ENST00000390467 PI4K2BQ8TCG2 481 aa6.16□□□□□ -1.42
TRAV40-201ENST00000390467 ACSF2Q96CM8 615 aaPredicted RBP6.16□□□□□ -1.42
TRAV40-201ENST00000390467 TMEM87BQ96K49 555 aa6.16□□□□□ -1.42
TRAV40-201ENST00000390467 HSPA12BQ96MM6 686 aa6.16□□□□□ -1.42
TRAV40-201ENST00000390467 SEMA3GQ9NS98 782 aa6.16□□□□□ -1.42
TRAV40-201ENST00000390467 CAPN6Q9Y6Q1 641 aa6.16□□□□□ -1.42
TRAV40-201ENST00000390467 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.16□□□□□ -1.42
TRAV40-201ENST00000390467 FAM221AA4D161 298 aa6.15□□□□□ -1.42
TRAV40-201ENST00000390467 CILPO75339 1184 aa6.15□□□□□ -1.42
TRAV40-201ENST00000390467 PF4P02776 101 aa6.15□□□□□ -1.42
TRAV40-201ENST00000390467 RLBP1P12271 317 aa6.15□□□□□ -1.42
TRAV40-201ENST00000390467 CAMK2GQ13555 558 aaPredicted RBP6.15□□□□□ -1.42
TRAV40-201ENST00000390467 CDKAL1Q5VV42 579 aa6.15□□□□□ -1.42
TRAV40-201ENST00000390467 OGFOD2Q6N063 350 aa6.15□□□□□ -1.42
TRAV40-201ENST00000390467 SLC23A3Q6PIS1 610 aa6.15□□□□□ -1.42
TRAV40-201ENST00000390467 DNAJB8Q8NHS0 232 aa6.15□□□□□ -1.42
TRAV40-201ENST00000390467 ASB11Q8WXH4 323 aa6.15□□□□□ -1.42
TRAV40-201ENST00000390467 ATP13A1Q9HD20 1204 aa6.15□□□□□ -1.42
TRAV40-201ENST00000390467 ST14Q9Y5Y6 855 aa6.15□□□□□ -1.42
TRAV40-201ENST00000390467 FAM155AB1AL88 458 aaPredicted RBP6.14□□□□□ -1.43
TRAV40-201ENST00000390467 CBX7O95931 251 aa6.14□□□□□ -1.43
TRAV40-201ENST00000390467 LMNB2Q03252 620 aa6.14□□□□□ -1.43
TRAV40-201ENST00000390467 ZP2Q05996 745 aa6.14□□□□□ -1.43
TRAV40-201ENST00000390467 ATG4DQ86TL0 474 aaPredicted RBP6.14□□□□□ -1.43
TRAV40-201ENST00000390467 CDH24Q86UP0 819 aa6.14□□□□□ -1.43
TRAV40-201ENST00000390467 ASIC4Q96FT7 647 aa6.14□□□□□ -1.43
TRAV40-201ENST00000390467 MRS2Q9HD23 443 aa6.14□□□□□ -1.43
TRAV40-201ENST00000390467 UPK3BL1B0FP48 263 aa6.13□□□□□ -1.43
TRAV40-201ENST00000390467 UPK3BL2E5RIL1 263 aa6.13□□□□□ -1.43
TRAV40-201ENST00000390467 H3BS24 57 aa6.13□□□□□ -1.43
TRAV40-201ENST00000390467 ERCC3P19447 782 aa6.13□□□□□ -1.43
TRAV40-201ENST00000390467 FAM160A1Q05DH4 1040 aa6.13□□□□□ -1.43
TRAV40-201ENST00000390467 CCDC84Q86UT8 332 aaPredicted RBP6.13□□□□□ -1.43
TRAV40-201ENST00000390467 MCATQ8IVS2 390 aaKnown RBP6.13□□□□□ -1.43
TRAV40-201ENST00000390467 GATAD2BQ8WXI9 593 aa6.13□□□□□ -1.43
TRAV40-201ENST00000390467 TMEM74Q96NL1 305 aa6.13□□□□□ -1.43
TRAV40-201ENST00000390467 ADAM30Q9UKF2 790 aa6.13□□□□□ -1.43
TRAV40-201ENST00000390467 POLR3KQ9Y2Y1 108 aaPredicted RBP6.13□□□□□ -1.43
TRAV40-201ENST00000390467 GARTP22102 1010 aa6.12□□□□□ -1.43
TRAV40-201ENST00000390467 GBP2P32456 591 aaPredicted RBP6.12□□□□□ -1.43
TRAV40-201ENST00000390467 PDE4BQ07343 736 aa6.12□□□□□ -1.43
TRAV40-201ENST00000390467 TNK2Q07912 1038 aa6.12□□□□□ -1.43
TRAV40-201ENST00000390467 SLC6A19Q695T7 634 aa6.12□□□□□ -1.43
TRAV40-201ENST00000390467 ZNF746Q6NUN9 644 aaPredicted RBP6.12□□□□□ -1.43
TRAV40-201ENST00000390467 FLAD1Q8NFF5 587 aa6.12□□□□□ -1.43
TRAV40-201ENST00000390467 FBXO27Q8NI29 283 aa6.12□□□□□ -1.43
TRAV40-201ENST00000390467 GIPC2Q8TF65 315 aa6.12□□□□□ -1.43
TRAV40-201ENST00000390467 PPP1R13LQ8WUF5 828 aa6.12□□□□□ -1.43
TRAV40-201ENST00000390467 CARS2Q9HA77 564 aaKnown RBP6.12□□□□□ -1.43
TRAV40-201ENST00000390467 COPRSQ9NQ92 184 aa6.12□□□□□ -1.43
TRAV40-201ENST00000390467 KBTBD4Q9NVX7 518 aa6.12□□□□□ -1.43
TRAV40-201ENST00000390467 BIN1O00499 593 aa6.11□□□□□ -1.43
TRAV40-201ENST00000390467 GRIN3BO60391 1043 aa6.11□□□□□ -1.43
TRAV40-201ENST00000390467 DNAJA2O60884 412 aa6.11□□□□□ -1.43
TRAV40-201ENST00000390467 BPNT1O95861 308 aa6.11□□□□□ -1.43
TRAV40-201ENST00000390467 PLCG1P19174 1290 aa6.11□□□□□ -1.43
TRAV40-201ENST00000390467 ERMP1Q7Z2K6 904 aa6.11□□□□□ -1.43
TRAV40-201ENST00000390467 CYB5D2Q8WUJ1 264 aa6.11□□□□□ -1.43
TRAV40-201ENST00000390467 FAM168AQ92567 244 aa6.11□□□□□ -1.43
TRAV40-201ENST00000390467 Q96M66 194 aa6.11□□□□□ -1.43
TRAV40-201ENST00000390467 RSRP1Q9BUV0 290 aa6.11□□□□□ -1.43
TRAV40-201ENST00000390467 BCL2L13Q9BXK5 485 aa6.11□□□□□ -1.43
TRAV40-201ENST00000390467 CTNND2Q9UQB3 1225 aa6.11□□□□□ -1.43
TRAV40-201ENST00000390467 WASH4PA8MWX3 477 aa6.1□□□□□ -1.43
TRAV40-201ENST00000390467 MINDY4BA8MYZ0 360 aa6.1□□□□□ -1.43
TRAV40-201ENST00000390467 MRPL58Q14197 206 aaKnown RBP6.1□□□□□ -1.43
TRAV40-201ENST00000390467 TMEM201Q5SNT2 666 aa6.1□□□□□ -1.43
TRAV40-201ENST00000390467 SNAP47Q5SQN1 464 aa6.1□□□□□ -1.43
TRAV40-201ENST00000390467 POU5F2Q8N7G0 328 aa6.1□□□□□ -1.43
TRAV40-201ENST00000390467 GOLM1Q8NBJ4 401 aa6.1□□□□□ -1.43
TRAV40-201ENST00000390467 FAM13CQ8NE31 585 aa6.1□□□□□ -1.43
TRAV40-201ENST00000390467 C19orf73Q9NVV2 129 aa6.1□□□□□ -1.43
TRAV40-201ENST00000390467 REV1Q9UBZ9 1251 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms